CuGenDBv2

Gene ID	Carg18954
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	LEA_2 domain-containing protein
Genome location	Carg_Chr17:5838460..5840098
RNA-Seq Expression	Carg18954
Synteny	Carg18954
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575419.1 hypothetical protein SDJN03_26058, partial [Cucurbita argyrosperma subsp. sororia]

5.0e-122

99.57

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Query:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI
        MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI
Subjt:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL
        KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLF+ATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL

Query:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL
        LGNGATVAKALDSFPSNSNTTATKCGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL

KAG7013960.1 hypothetical protein SDJN02_24129 [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-122

100

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Query:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI
        MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI
Subjt:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL
        KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL

Query:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL
        LGNGATVAKALDSFPSNSNTTATKCGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL

XP_022953801.1 uncharacterized protein LOC111456218 isoform X1 [Cucurbita moschata]

3.4e-118

96.54

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Query:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI
        MDVLASGTRFS+RFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTL S+NPNKIGI
Subjt:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL
        KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLF+AT EFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNF+E+L
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL

Query:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL
        LGNGATVAKALDSFPSNSNTTAT CGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL

XP_022992383.1 uncharacterized protein LOC111488707 isoform X1 [Cucurbita maxima]

1.0e-119

96.97

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Query:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI
        MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNS SPFISSVFTLTLKSQNPNKIGI
Subjt:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL
        KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLF+ATPEFVEMKIIGD+GVELFVLHMAVIKMKVALNCNVDVHYRGLNF+E+L
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL

Query:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL
        LGNGATV KALDSFPSNSNTTAT CGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL

XP_023548218.1 uncharacterized protein LOC111806923 [Cucurbita pepo subsp. pepo]

2.3e-119

96.97

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Query:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI
        MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTL S+NPNKIGI
Subjt:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL
        KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLF+ATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNF+E+L
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL

Query:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL
        LGNGATVAKALDSFPSN+NTTAT CGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6V0 Uncharacterized protein

2.8e-94

77.92

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Query:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI
        MDVL   T FS+RFCC QICTLYTLKRFC FLLF+A+FSIIAIAIAALPVIFLLKPR+PIFSL S+RLDWYNI++ S SP +SSVFTLTL SQNPNK+GI
Subjt:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL
        KYSPSRLLLI+D +A+IGTIRVPEVFQPARS +R VRTRLLLH+ +VDL   T EFVEMKIIGDVGVELFVLHM VIKMKVAL C+VD+ YR LNF+EE+
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL

Query:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL
        LGNG +V KALDS PSNS T ++KCG+AFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL

A0A6J1CZI3 uncharacterized protein LOC111015690 isoform X2

1.6e-94

77.59

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Query:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI
        MDVLAS T+FSN FCC QICT+YTLKRFC+FLLFIA+FS+IA+ IAALPVI LLKPR+PIFSL+SLRLDWYNIS+ S S F+SSVFTLTL SQNPN+I I
Subjt:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL
        KYSPSRLL+I+DGNA+IGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLF+AT E  E+K++GDVGVEL VLHMAV+KMKVALNC+V V+YR LNF+ E+
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL

Query:  LGNGA-TVAKALDSFPSNSNTTATKCGVAFYL
        L NG+ T+ KAL SF SNS T +T CG+AFYL
Subjt:  LGNGA-TVAKALDSFPSNSNTTATKCGVAFYL

A0A6J1GP37 uncharacterized protein LOC111456218 isoform X1

1.6e-118

96.54

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Query:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI
        MDVLASGTRFS+RFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTL S+NPNKIGI
Subjt:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL
        KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLF+AT EFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNF+E+L
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL

Query:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL
        LGNGATVAKALDSFPSNSNTTAT CGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL

A0A6J1JXE4 uncharacterized protein LOC111488707 isoform X2

3.3e-95

82.68

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Query:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI
        MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLD                               
Subjt:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL
           PSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLF+ATPEFVEMKIIGD+GVELFVLHMAVIKMKVALNCNVDVHYRGLNF+E+L
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL

Query:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL
        LGNGATV KALDSFPSNSNTTAT CGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL

A0A6J1JZ17 uncharacterized protein LOC111488707 isoform X1

5.1e-120

96.97

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Query:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI
        MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNS SPFISSVFTLTLKSQNPNKIGI
Subjt:  MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGI

Query:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL
        KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLF+ATPEFVEMKIIGD+GVELFVLHMAVIKMKVALNCNVDVHYRGLNF+E+L
Subjt:  KYSPSRLLLIHDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEEL

Query:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL
        LGNGATV KALDSFPSNSNTTAT CGVAFYL
Subjt:  LGNGATVAKALDSFPSNSNTTATKCGVAFYL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G11890.1 FUNCTIONS IN: molecular_function unknown

7.8e-04

31.09

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Query:  NRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSAS--PFISSVFTLTLKSQNPNK-IGIKYSPSRLL
        +R  C +IC        C + + I L   +  AIAA  +  +  PR P FS+ S+R+   N++ +S S    +SS F  TL S+NPN+ +   Y P  + 
Subjt:  NRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSAS--PFISSVFTLTLKSQNPNK-IGIKYSPSRLL

Query:  L-IHDGNAMIGTIRVPEVF
        +       M+G   VP  F
Subjt:  L-IHDGNAMIGTIRVPEVF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATGTTCTCGCATCTGGAACTCGATTTTCCAATCGTTTTTGCTGCCACCAGATCTGTACGCTTTATACTCTGAAACGATTCTGCCTTTTCCTCCTCTTCATCGCTCT
CTTCTCGATCATCGCAATCGCGATCGCCGCATTGCCTGTAATCTTCCTATTAAAGCCTCGACAGCCGATCTTTTCTCTCGAATCACTGCGATTGGATTGGTACAACATTA
GCCTCAACTCTGCCTCTCCATTTATTTCTTCGGTTTTCACCTTGACTCTCAAATCTCAAAACCCTAACAAAATCGGCATTAAGTATAGTCCGTCGAGGCTTCTCCTGATC
CACGATGGAAACGCCATGATCGGAACCATACGAGTCCCCGAAGTGTTCCAGCCCGCTCGTAGTGACGATCGGAGTGTTCGAACTCGTCTTCTGCTGCATCGATTCAATGT
CGATTTGTTCAATGCGACGCCAGAGTTTGTTGAGATGAAAATCATTGGCGATGTTGGTGTAGAGCTGTTTGTGCTTCATATGGCTGTGATCAAGATGAAGGTTGCTCTGA
ACTGCAATGTGGATGTTCATTACAGAGGGCTTAATTTCAAAGAAGAATTACTCGGCAATGGAGCAACCGTTGCAAAAGCTTTGGATTCATTTCCTTCCAACTCCAACACA
ACGGCCACAAAGTGTGGCGTGGCTTTTTACTTATGA

mRNA sequence

Show/hide mRNA sequence

ATTTAATCCGTGTTCTTCGTGTCTCCAAAATGGCCGTCAATGGATGTTCTCGCATCTGGAACTCGATTTTCCAATCGTTTTTGCTGCCACCAGATCTGTACGCTTTATAC
TCTGAAACGATTCTGCCTTTTCCTCCTCTTCATCGCTCTCTTCTCGATCATCGCAATCGCGATCGCCGCATTGCCTGTAATCTTCCTATTAAAGCCTCGACAGCCGATCT
TTTCTCTCGAATCACTGCGATTGGATTGGTACAACATTAGCCTCAACTCTGCCTCTCCATTTATTTCTTCGGTTTTCACCTTGACTCTCAAATCTCAAAACCCTAACAAA
ATCGGCATTAAGTATAGTCCGTCGAGGCTTCTCCTGATCCACGATGGAAACGCCATGATCGGAACCATACGAGTCCCCGAAGTGTTCCAGCCCGCTCGTAGTGACGATCG
GAGTGTTCGAACTCGTCTTCTGCTGCATCGATTCAATGTCGATTTGTTCAATGCGACGCCAGAGTTTGTTGAGATGAAAATCATTGGCGATGTTGGTGTAGAGCTGTTTG
TGCTTCATATGGCTGTGATCAAGATGAAGGTTGCTCTGAACTGCAATGTGGATGTTCATTACAGAGGGCTTAATTTCAAAGAAGAATTACTCGGCAATGGAGCAACCGTT
GCAAAAGCTTTGGATTCATTTCCTTCCAACTCCAACACAACGGCCACAAAGTGTGGCGTGGCTTTTTACTTATGAAGATGCTTAACTCGCTAATTAAGTAATTAATGGTT
AAGTGTTTTGTTTAATCTCTTTTTGGATTTGTTTGTTTTATTTACTAATTTCCTTCCTCACCCAATTATTTGGATTTTTCTTTTTCT

Protein sequence

Show/hide protein sequence

MDVLASGTRFSNRFCCHQICTLYTLKRFCLFLLFIALFSIIAIAIAALPVIFLLKPRQPIFSLESLRLDWYNISLNSASPFISSVFTLTLKSQNPNKIGIKYSPSRLLLI
HDGNAMIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFNATPEFVEMKIIGDVGVELFVLHMAVIKMKVALNCNVDVHYRGLNFKEELLGNGATVAKALDSFPSNSNT
TATKCGVAFYL

Carg18954 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome