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Carg18956 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18956
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCCAAT/enhancer-binding protein zeta
Genome locationCarg_Chr17:5860268..5863595
RNA-Seq ExpressionCarg18956
SyntenyCarg18956
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013962.1 hypothetical protein SDJN02_24131, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-88100Show/hide
Query:  MLIFANKALSSQSNTQKNLNELQSKIPPKPRIQKLPIRKAVVIYEVDSSLFRPRLGLRAKYHVILHELLKENEEEKEEAADDLVSESDDNDNAAEDLFDI
        MLIFANKALSSQSNTQKNLNELQSKIPPKPRIQKLPIRKAVVIYEVDSSLFRPRLGLRAKYHVILHELLKENEEEKEEAADDLVSESDDNDNAAEDLFDI
Subjt:  MLIFANKALSSQSNTQKNLNELQSKIPPKPRIQKLPIRKAVVIYEVDSSLFRPRLGLRAKYHVILHELLKENEEEKEEAADDLVSESDDNDNAAEDLFDI

Query:  DMVGGDETENEEMETVTTSTMTRIKLPMKTTKTWFITSVISSDDDIGQRAENKTSSFASLEDYKHLMNKNGVHKKQVY
        DMVGGDETENEEMETVTTSTMTRIKLPMKTTKTWFITSVISSDDDIGQRAENKTSSFASLEDYKHLMNKNGVHKKQVY
Subjt:  DMVGGDETENEEMETVTTSTMTRIKLPMKTTKTWFITSVISSDDDIGQRAENKTSSFASLEDYKHLMNKNGVHKKQVY

KAG7025918.1 CCAAT/enhancer-binding protein zeta [Cucurbita argyrosperma subsp. argyrosperma]1.2e-0635.1Show/hide
Query:  KENEEEKEEAADDLVSESDDNDNAAEDLFDIDMVGGDETENEEMETVTTS-----------------------------TMTRIKLPMKTT--------K
        K+ +   EEAA+DLV E+D ND+AAEDL D+DMVGGDE++NEE+E +  S                              M+  ++ + +          
Subjt:  KENEEEKEEAADDLVSESDDNDNAAEDLFDIDMVGGDETENEEMETVTTS-----------------------------TMTRIKLPMKTT--------K

Query:  TWFITSVISSDDDIGQ--------RAENKTSSFASLEDYKHLMNKNGVHKK
        +  + S    DDDIGQ        + + K S FASLEDY+HL+N++  HKK
Subjt:  TWFITSVISSDDDIGQ--------RAENKTSSFASLEDYKHLMNKNGVHKK

XP_022964285.1 CCAAT/enhancer-binding protein zeta [Cucurbita moschata]5.4e-0735.14Show/hide
Query:  KENEEEKEEAADDLVSESDDNDNAAEDLFDIDMVGGDETENEEMETVTTS-----------------------------TMTRIKLPMKTT-----KTWF
        K+ +   EEAA+DLV E+D ND+AAEDL D+DMVGGDE++NEE+E +  S                              M+  ++ + +          
Subjt:  KENEEEKEEAADDLVSESDDNDNAAEDLFDIDMVGGDETENEEMETVTTS-----------------------------TMTRIKLPMKTT-----KTWF

Query:  ITSVISSDDDIG--------QRAENKTSSFASLEDYKHLMNKNGVHKK
           ++S DDDIG        ++ + K S FASLEDY+HL+N++  HKK
Subjt:  ITSVISSDDDIG--------QRAENKTSSFASLEDYKHLMNKNGVHKK

XP_022999988.1 CCAAT/enhancer-binding protein zeta [Cucurbita maxima]1.0e-0533.77Show/hide
Query:  KENEEEKEEAADDLVSESDDNDNAAEDLFDIDMVGGDETENEEMETVTTST--------------MTRIK-------LPMKTTKTWFITSVISSDDDIG-
        K+ +   EEAA+DLV E+D ND+AAEDL D+DMVGGDE++NEE+E +  S               + +I        +   + +   I S I+  +D+G 
Subjt:  KENEEEKEEAADDLVSESDDNDNAAEDLFDIDMVGGDETENEEMETVTTST--------------MTRIK-------LPMKTTKTWFITSVISSDDDIG-

Query:  -----------------------QRAENKTSSFASLEDYKHLMNKNGVHKK
                               ++ + K S FASLEDY+HL+N++  HKK
Subjt:  -----------------------QRAENKTSSFASLEDYKHLMNKNGVHKK

XP_023514706.1 CCAAT/enhancer-binding protein zeta [Cucurbita pepo subsp. pepo]1.2e-0635.57Show/hide
Query:  KENEEEKEEAADDLVSESDDNDNAAEDLFDIDMVGGDETENEEMETVTTST--------------MTRIK-------LPMKTTKTWFITSVIS-------
        K+ +   EEAA+DLV E+D ND+A+EDL D+DMVGGDE++NEE+E +  S               + ++        +   + +   I S I+       
Subjt:  KENEEEKEEAADDLVSESDDNDNAAEDLFDIDMVGGDETENEEMETVTTST--------------MTRIK-------LPMKTTKTWFITSVIS-------

Query:  -------SDDDIGQ--------RAENKTSSFASLEDYKHLMNKNGVHKK
                DDD+GQ        + + K S FASLEDY+HL+N++G HKK
Subjt:  -------SDDDIGQ--------RAENKTSSFASLEDYKHLMNKNGVHKK

TrEMBL top hitse value%identityAlignment
A0A1S3CH26 CCAAT/enhancer-binding protein zeta7.9e-0432.26Show/hide
Query:  KENEEEKEEAADDLVS---ESDDNDNAAEDLFDIDMVGGDETENEEMETVTTST--------------MTRIK-------LPMKTTKTWFITSVISSDDD
        K+ +   +EAA+DL     E DDND+ AEDL DIDMVGGDE++NEE+E +  S               + R+        +   + +   I S I+  +D
Subjt:  KENEEEKEEAADDLVS---ESDDNDNAAEDLFDIDMVGGDETENEEMETVTTST--------------MTRIK-------LPMKTTKTWFITSVISSDDD

Query:  IGQRAEN------------------------KTSSFASLEDYKHLMNKNGVHKKQ
        +G  ++                         K S FASLEDY+H++NK+  HKK+
Subjt:  IGQRAEN------------------------KTSSFASLEDYKHLMNKNGVHKKQ

A0A5A7UW80 CCAAT/enhancer-binding protein zeta7.9e-0432.26Show/hide
Query:  KENEEEKEEAADDLVS---ESDDNDNAAEDLFDIDMVGGDETENEEMETVTTST--------------MTRIK-------LPMKTTKTWFITSVISSDDD
        K+ +   +EAA+DL     E DDND+ AEDL DIDMVGGDE++NEE+E +  S               + R+        +   + +   I S I+  +D
Subjt:  KENEEEKEEAADDLVS---ESDDNDNAAEDLFDIDMVGGDETENEEMETVTTST--------------MTRIK-------LPMKTTKTWFITSVISSDDD

Query:  IGQRAEN------------------------KTSSFASLEDYKHLMNKNGVHKKQ
        +G  ++                         K S FASLEDY+H++NK+  HKK+
Subjt:  IGQRAEN------------------------KTSSFASLEDYKHLMNKNGVHKKQ

A0A5D3C0I6 CCAAT/enhancer-binding protein zeta7.9e-0432.26Show/hide
Query:  KENEEEKEEAADDLVS---ESDDNDNAAEDLFDIDMVGGDETENEEMETVTTST--------------MTRIK-------LPMKTTKTWFITSVISSDDD
        K+ +   +EAA+DL     E DDND+ AEDL DIDMVGGDE++NEE+E +  S               + R+        +   + +   I S I+  +D
Subjt:  KENEEEKEEAADDLVS---ESDDNDNAAEDLFDIDMVGGDETENEEMETVTTST--------------MTRIK-------LPMKTTKTWFITSVISSDDD

Query:  IGQRAEN------------------------KTSSFASLEDYKHLMNKNGVHKKQ
        +G  ++                         K S FASLEDY+H++NK+  HKK+
Subjt:  IGQRAEN------------------------KTSSFASLEDYKHLMNKNGVHKKQ

A0A6J1HKD5 CCAAT/enhancer-binding protein zeta2.6e-0735.14Show/hide
Query:  KENEEEKEEAADDLVSESDDNDNAAEDLFDIDMVGGDETENEEMETVTTS-----------------------------TMTRIKLPMKTT-----KTWF
        K+ +   EEAA+DLV E+D ND+AAEDL D+DMVGGDE++NEE+E +  S                              M+  ++ + +          
Subjt:  KENEEEKEEAADDLVSESDDNDNAAEDLFDIDMVGGDETENEEMETVTTS-----------------------------TMTRIKLPMKTT-----KTWF

Query:  ITSVISSDDDIG--------QRAENKTSSFASLEDYKHLMNKNGVHKK
           ++S DDDIG        ++ + K S FASLEDY+HL+N++  HKK
Subjt:  ITSVISSDDDIG--------QRAENKTSSFASLEDYKHLMNKNGVHKK

A0A6J1KLA3 CCAAT/enhancer-binding protein zeta4.9e-0633.77Show/hide
Query:  KENEEEKEEAADDLVSESDDNDNAAEDLFDIDMVGGDETENEEMETVTTST--------------MTRIK-------LPMKTTKTWFITSVISSDDDIG-
        K+ +   EEAA+DLV E+D ND+AAEDL D+DMVGGDE++NEE+E +  S               + +I        +   + +   I S I+  +D+G 
Subjt:  KENEEEKEEAADDLVSESDDNDNAAEDLFDIDMVGGDETENEEMETVTTST--------------MTRIK-------LPMKTTKTWFITSVISSDDDIG-

Query:  -----------------------QRAENKTSSFASLEDYKHLMNKNGVHKK
                               ++ + K S FASLEDY+HL+N++  HKK
Subjt:  -----------------------QRAENKTSSFASLEDYKHLMNKNGVHKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72440.1 CCAAT-binding factor2.7e-0450.98Show/hide
Query:  PIRKAVVIYEVDSSLFRPRLGLRAKYHVI--LHELLKENEEEKEEAADDLV
        P  KAVVI EVDS LFRP LGLRAKYH +  L ++   ++ E  + A  L+
Subjt:  PIRKAVVIYEVDSSLFRPRLGLRAKYHVI--LHELLKENEEEKEEAADDLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATTTTCGCAAACAAGGCCCTCTCAAGCCAATCAAACACCCAAAAAAACCTAAACGAACTCCAGAGCAAGATCCCACCAAAACCTAGAATCCAGAAGCTCCCAAT
CCGAAAAGCTGTGGTAATTTACGAGGTGGACTCTTCCCTTTTTCGGCCTCGTTTGGGGTTACGAGCCAAGTATCACGTTATCTTGCATGAACTCCTCAAAGAAAACGAAG
AAGAAAAAGAGGAGGCTGCTGATGATTTGGTCAGTGAGTCTGACGACAACGACAATGCTGCCGAAGATCTGTTCGACATTGACATGGTTGGTGGGGATGAGACTGAAAAT
GAAGAAATGGAGACGGTGACTACGTCTACGATGACTAGGATCAAGTTACCAATGAAGACAACAAAGACTTGGTTCATAACATCAGTGATTAGCAGTGACGACGACATAGG
ACAAAGAGCGGAAAACAAAACATCATCATTTGCAAGCCTCGAAGATTACAAGCACTTGATGAACAAGAACGGTGTTCATAAAAAACAAGTCTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGATTTTCGCAAACAAGGCCCTCTCAAGCCAATCAAACACCCAAAAAAACCTAAACGAACTCCAGAGCAAGATCCCACCAAAACCTAGAATCCAGAAGCTCCCAAT
CCGAAAAGCTGTGGTAATTTACGAGGTGGACTCTTCCCTTTTTCGGCCTCGTTTGGGGTTACGAGCCAAGTATCACGTTATCTTGCATGAACTCCTCAAAGAAAACGAAG
AAGAAAAAGAGGAGGCTGCTGATGATTTGGTCAGTGAGTCTGACGACAACGACAATGCTGCCGAAGATCTGTTCGACATTGACATGGTTGGTGGGGATGAGACTGAAAAT
GAAGAAATGGAGACGGTGACTACGTCTACGATGACTAGGATCAAGTTACCAATGAAGACAACAAAGACTTGGTTCATAACATCAGTGATTAGCAGTGACGACGACATAGG
ACAAAGAGCGGAAAACAAAACATCATCATTTGCAAGCCTCGAAGATTACAAGCACTTGATGAACAAGAACGGTGTTCATAAAAAACAAGTCTACTAA
Protein sequenceShow/hide protein sequence
MLIFANKALSSQSNTQKNLNELQSKIPPKPRIQKLPIRKAVVIYEVDSSLFRPRLGLRAKYHVILHELLKENEEEKEEAADDLVSESDDNDNAAEDLFDIDMVGGDETEN
EEMETVTTSTMTRIKLPMKTTKTWFITSVISSDDDIGQRAENKTSSFASLEDYKHLMNKNGVHKKQVY