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Carg18957 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18957
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAuxin responsive SAUR protein
Genome locationCarg_Chr17:5866809..5867183
RNA-Seq ExpressionCarg18957
SyntenyCarg18957
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575422.1 Auxin-responsive protein SAUR78, partial [Cucurbita argyrosperma subsp. sororia]5.9e-6199.19Show/hide
Query:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEH
        MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAV+VSCEVVMFEH
Subjt:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEH

Query:  LLWMLENAATQLGSTEELVEFYTC
        LLWMLENAATQLGSTEELVEFYTC
Subjt:  LLWMLENAATQLGSTEELVEFYTC

KAG7013963.1 hypothetical protein SDJN02_24132, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-61100Show/hide
Query:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEH
        MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEH
Subjt:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEH

Query:  LLWMLENAATQLGSTEELVEFYTC
        LLWMLENAATQLGSTEELVEFYTC
Subjt:  LLWMLENAATQLGSTEELVEFYTC

XP_022953657.1 uncharacterized protein LOC111456121 [Cucurbita moschata]2.8e-5895.97Show/hide
Query:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEH
        MVKAGGTLTKLKSAIKRWPSISKLGRSSSS+SVAAVS+ ANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKS SDNDGAV+VSCEVVMFEH
Subjt:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEH

Query:  LLWMLENAATQLGSTEELVEFYTC
        LLWMLENAATQLGSTEELVEFYTC
Subjt:  LLWMLENAATQLGSTEELVEFYTC

XP_022992444.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]4.7e-5895.16Show/hide
Query:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEH
        MVKAGGTLTKLKSAIKRWPSISKLGRSSSS+SVAAVSDGANI E+ISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKS+SDND AV+VSCEVVMFEH
Subjt:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEH

Query:  LLWMLENAATQLGSTEELVEFYTC
        LLWMLENAATQLGSTEELVEFYTC
Subjt:  LLWMLENAATQLGSTEELVEFYTC

XP_023548428.1 uncharacterized protein LOC111807083 [Cucurbita pepo subsp. pepo]2.6e-5697.5Show/hide
Query:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEH
        MVKAGGTLTKLKSAIKRWPSISKLGRSSSS+SVAAVSDGANI EDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAV+VSCEVVMFEH
Subjt:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEH

Query:  LLWMLENAATQLGSTEELVE
        LLWMLENAATQLGSTEELVE
Subjt:  LLWMLENAATQLGSTEELVE

TrEMBL top hitse value%identityAlignment
A0A0A0KAQ4 Uncharacterized protein2.1e-5188.1Show/hide
Query:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDI-SKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSAS-DNDGAVIVSCEVVMF
        MVKA GTLTKLKSAIKRWPSI+KLGRSSSS+SVAAVSDGAN+GE+I SKEL TVYVGKSRRPYFVSLDV+ HPLFQELVDKS+S D DG ++VSCEVVMF
Subjt:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDI-SKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSAS-DNDGAVIVSCEVVMF

Query:  EHLLWMLENAATQLGSTEELVEFYTC
        EHLLWMLENAATQLGSTEELVEFYTC
Subjt:  EHLLWMLENAATQLGSTEELVEFYTC

A0A1S3CI22 uncharacterized protein LOC1035006615.1e-5085.71Show/hide
Query:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDI-SKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSAS-DNDGAVIVSCEVVMF
        MVKA GTLTKLKSAIKRWPSI+KLGRSSSS+SVAAVSDG N+G++  SKEL TVYVGKSRRPYFVSLDV+ HPLFQELVDKS+S D DG ++VSCEVVMF
Subjt:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDI-SKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSAS-DNDGAVIVSCEVVMF

Query:  EHLLWMLENAATQLGSTEELVEFYTC
        EHLLWMLENAATQLGSTEELVEFYTC
Subjt:  EHLLWMLENAATQLGSTEELVEFYTC

A0A5D3BXT3 Auxin responsive SAUR protein5.1e-5085.71Show/hide
Query:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDI-SKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSAS-DNDGAVIVSCEVVMF
        MVKA GTLTKLKSAIKRWPSI+KLGRSSSS+SVAAVSDG N+G++  SKEL TVYVGKSRRPYFVSLDV+ HPLFQELVDKS+S D DG ++VSCEVVMF
Subjt:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDI-SKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSAS-DNDGAVIVSCEVVMF

Query:  EHLLWMLENAATQLGSTEELVEFYTC
        EHLLWMLENAATQLGSTEELVEFYTC
Subjt:  EHLLWMLENAATQLGSTEELVEFYTC

A0A6J1GNV0 uncharacterized protein LOC1114561211.3e-5895.97Show/hide
Query:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEH
        MVKAGGTLTKLKSAIKRWPSISKLGRSSSS+SVAAVS+ ANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKS SDNDGAV+VSCEVVMFEH
Subjt:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEH

Query:  LLWMLENAATQLGSTEELVEFYTC
        LLWMLENAATQLGSTEELVEFYTC
Subjt:  LLWMLENAATQLGSTEELVEFYTC

A0A6J1JXK2 auxin-responsive protein SAUR50-like2.3e-5895.16Show/hide
Query:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEH
        MVKAGGTLTKLKSAIKRWPSISKLGRSSSS+SVAAVSDGANI E+ISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKS+SDND AV+VSCEVVMFEH
Subjt:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEH

Query:  LLWMLENAATQLGSTEELVEFYTC
        LLWMLENAATQLGSTEELVEFYTC
Subjt:  LLWMLENAATQLGSTEELVEFYTC

SwissProt top hitse value%identityAlignment
P0DKL1 Auxin-responsive protein SAUR509.0e-0431.82Show/hide
Query:  SDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASD----NDGAVIVSCEVVMF
        +D + +  D+ K    VYVG+ R  Y V +  + HP FQ+L+ +S  +    +D  +I+ C+ V F
Subjt:  SDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASD----NDGAVIVSCEVVMF

Q29PU2 Auxin-responsive protein SAUR761.3e-2146.51Show/hide
Query:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQEL--VDKSASDNDGAVIVSCEVVMF
        M K G  L KLKS +K+  S +   + +   +    S  + +    S++L TVYVG++RR Y VS DV++HPLFQ+L  VD      DG++ VSCEVV+F
Subjt:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQEL--VDKSASDNDGAVIVSCEVVMF

Query:  EHLLWMLENA---ATQLGSTEELVEFYTC
        EHLLWMLENA    ++  S  ELVEFY C
Subjt:  EHLLWMLENA---ATQLGSTEELVEFYTC

Q9C9E1 Auxin-responsive protein SAUR783.4e-2756.2Show/hide
Query:  GTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSAS---DNDGAVIVSCEVVMFEHLL
        G LTKLKSA+K+WPS +K      S S AAVSD   + ED    LH VYVG++RRPY +  D+I+HPLFQELVD+S+S   + D  ++V+CEVV+FEHLL
Subjt:  GTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSAS---DNDGAVIVSCEVVMFEHLL

Query:  WMLENAATQLGSTEELVEFYT
        WML+ +  + GS EEL EFYT
Subjt:  WMLENAATQLGSTEELVEFYT

Q9LQI6 Auxin-responsive protein SAUR777.6e-2751.15Show/hide
Query:  GTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSA-----SDNDGAVIVSCEVVMFEH
        G LTKLKSAIK+WPS++K   S+   +  AVS+ +       ++LH VYVGKSRRPY +S  VIAHPLFQEL+D+S+       +   V+V+CEVV+FEH
Subjt:  GTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSA-----SDNDGAVIVSCEVVMFEH

Query:  LLWMLENAAT--------QLGSTEELVEFYT
        LLWML+N+++        + GS EEL EFYT
Subjt:  LLWMLENAAT--------QLGSTEELVEFYT

Arabidopsis top hitse value%identityAlignment
AT1G16510.1 SAUR-like auxin-responsive protein family5.4e-0429.27Show/hide
Query:  VYVGKSRRPYFVSLDVIAHPLFQELVDKSASD----NDGAVIVSCEVVMFEHLLWM-----------LENAATQLGSTEELV
        VYVG+    + VS +++ HP+F  L+++SA +      G + + C V++FE ++             LEN    L S +EL+
Subjt:  VYVGKSRRPYFVSLDVIAHPLFQELVDKSASD----NDGAVIVSCEVVMFEHLLWM-----------LENAATQLGSTEELV

AT1G17345.1 SAUR-like auxin-responsive protein family5.4e-2851.15Show/hide
Query:  GTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSA-----SDNDGAVIVSCEVVMFEH
        G LTKLKSAIK+WPS++K   S+   +  AVS+ +       ++LH VYVGKSRRPY +S  VIAHPLFQEL+D+S+       +   V+V+CEVV+FEH
Subjt:  GTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSA-----SDNDGAVIVSCEVVMFEH

Query:  LLWMLENAAT--------QLGSTEELVEFYT
        LLWML+N+++        + GS EEL EFYT
Subjt:  LLWMLENAAT--------QLGSTEELVEFYT

AT1G72430.1 SAUR-like auxin-responsive protein family2.4e-2856.2Show/hide
Query:  GTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSAS---DNDGAVIVSCEVVMFEHLL
        G LTKLKSA+K+WPS +K      S S AAVSD   + ED    LH VYVG++RRPY +  D+I+HPLFQELVD+S+S   + D  ++V+CEVV+FEHLL
Subjt:  GTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSAS---DNDGAVIVSCEVVMFEHLL

Query:  WMLENAATQLGSTEELVEFYT
        WML+ +  + GS EEL EFYT
Subjt:  WMLENAATQLGSTEELVEFYT

AT3G12955.1 SAUR-like auxin-responsive protein family8.7e-1037.17Show/hide
Query:  KLKSAIKRWPSIS-KLGRSSSSMSVAAVS---DGANIGEDISKE-----LHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSA-----SDNDGAVI--VSC
        +L   ++R  S+S +LGRS S  S+ + S   D  +  +D+ +        TV VG++++PY +S   + HPL   LV+K        + DG+ I  V C
Subjt:  KLKSAIKRWPSIS-KLGRSSSSMSVAAVS---DGANIGEDISKE-----LHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSA-----SDNDGAVI--VSC

Query:  EVVMFEHLLWMLE
        EVV+F+HLLWMLE
Subjt:  EVVMFEHLLWMLE

AT5G20820.1 SAUR-like auxin-responsive protein family8.9e-2346.51Show/hide
Query:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQEL--VDKSASDNDGAVIVSCEVVMF
        M K G  L KLKS +K+  S +   + +   +    S  + +    S++L TVYVG++RR Y VS DV++HPLFQ+L  VD      DG++ VSCEVV+F
Subjt:  MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQEL--VDKSASDNDGAVIVSCEVVMF

Query:  EHLLWMLENA---ATQLGSTEELVEFYTC
        EHLLWMLENA    ++  S  ELVEFY C
Subjt:  EHLLWMLENA---ATQLGSTEELVEFYTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAAGCTGGAGGAACTCTCACCAAGCTCAAGTCCGCCATTAAACGATGGCCCTCGATCTCCAAGCTCGGTCGGAGCTCCAGCTCCATGTCGGTTGCTGCCGTGAG
CGACGGTGCCAATATTGGCGAGGACATCTCTAAGGAGCTTCACACGGTCTACGTCGGTAAGTCTCGACGTCCGTATTTCGTCAGCTTAGATGTCATAGCACACCCTCTAT
TTCAAGAGTTGGTCGATAAGTCAGCGTCTGACAACGACGGTGCAGTGATCGTCTCTTGTGAAGTGGTCATGTTTGAACATTTGTTGTGGATGTTGGAAAATGCCGCGACC
CAATTGGGGTCGACGGAGGAACTCGTCGAGTTTTACACTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAAGCTGGAGGAACTCTCACCAAGCTCAAGTCCGCCATTAAACGATGGCCCTCGATCTCCAAGCTCGGTCGGAGCTCCAGCTCCATGTCGGTTGCTGCCGTGAG
CGACGGTGCCAATATTGGCGAGGACATCTCTAAGGAGCTTCACACGGTCTACGTCGGTAAGTCTCGACGTCCGTATTTCGTCAGCTTAGATGTCATAGCACACCCTCTAT
TTCAAGAGTTGGTCGATAAGTCAGCGTCTGACAACGACGGTGCAGTGATCGTCTCTTGTGAAGTGGTCATGTTTGAACATTTGTTGTGGATGTTGGAAAATGCCGCGACC
CAATTGGGGTCGACGGAGGAACTCGTCGAGTTTTACACTTGTTGA
Protein sequenceShow/hide protein sequence
MVKAGGTLTKLKSAIKRWPSISKLGRSSSSMSVAAVSDGANIGEDISKELHTVYVGKSRRPYFVSLDVIAHPLFQELVDKSASDNDGAVIVSCEVVMFEHLLWMLENAAT
QLGSTEELVEFYTC