; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18959 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18959
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiondormancy-associated protein homolog 4-like
Genome locationCarg_Chr17:5876123..5877889
RNA-Seq ExpressionCarg18959
SyntenyCarg18959
Gene Ontology termsNA
InterPro domainsIPR008406 - Dormancy/auxin associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575424.1 Trihelix transcription factor ASIL2, partial [Cucurbita argyrosperma subsp. sororia]3.9e-22100Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILR
        MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILR
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILR

KAG6593570.1 Dormancy-associated protein-like 4, partial [Cucurbita argyrosperma subsp. sororia]2.1e-1575Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSDF
        M   LHKLWD TLAGP  DTG G LRK+DS SV+ESP VKIS DIPVTRS+ ILRSNSDF
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSDF

KAG7013965.1 Dormancy-associated protein-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-43100Show/hide
Query:  MRTFKGGSFVVLRCCRGKIGISEEIMTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSDFLELLG
        MRTFKGGSFVVLRCCRGKIGISEEIMTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSDFLELLG
Subjt:  MRTFKGGSFVVLRCCRGKIGISEEIMTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSDFLELLG

XP_022999999.1 dormancy-associated protein homolog 4-like [Cucurbita maxima]4.7e-1573.33Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSDF
        M   LHKLWD TLAGP  DTG G LRK+DS S +ESP VKIS DIPVTRS+ ILRSNSDF
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSDF

XP_023514880.1 dormancy-associated protein homolog 4-like [Cucurbita pepo subsp. pepo]4.7e-1573.33Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSDF
        M   LHKLWD TLAGP  DTG G LRK+DS S +ESP VKIS DIPVTRS+ ILRSNSDF
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSDF

TrEMBL top hitse value%identityAlignment
A0A0A0K9D5 Uncharacterized protein3.0e-1264.06Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFIL-RSNSDFLEL
        M++ LHKLWD TLAGP  D G G LRK+D  S SES  VKISGD+PVTRS+ IL R N DF  L
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFIL-RSNSDFLEL

A0A5A7UTX0 Dormancy-associated protein-like protein 4 isoform X24.0e-1267.27Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILR
        MT  LHK+WD TLAGP  D G G LRK+D  S SESP VKI+GD+PVTRS+ ILR
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILR

A0A6J1DF61 dormancy-associated protein homolog 4-like4.3e-1468.33Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSDF
        MT+ LHKLWD T+AGP  DTG G LRK+DS S SE P +KIS +IPVTRS+ ILR NSDF
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSDF

A0A6J1HKD6 dormancy-associated protein homolog 4-like5.0e-1574.58Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSD
        M   LHKLWD TLAGP  DTG G LRK+DS SV+ESP VKIS DIPVTRS+ ILRSNSD
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSD

A0A6J1KIP1 dormancy-associated protein homolog 4-like2.3e-1573.33Show/hide
Query:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSDF
        M   LHKLWD TLAGP  DTG G LRK+DS S +ESP VKIS DIPVTRS+ ILRSNSDF
Subjt:  MTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSDF

SwissProt top hitse value%identityAlignment
F4HV65 Dormancy-associated protein homolog 42.0e-0850.91Show/hide
Query:  LHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSD
        LHKLWD T+AGP  D G G LRKHDS S   S    +S D  VTRS+ + + N++
Subjt:  LHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSD

Arabidopsis top hitse value%identityAlignment
AT1G54070.1 Dormancy/auxin associated family protein1.4e-0950.91Show/hide
Query:  LHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSD
        LHKLWD T+AGP  D G G LRKHDS S   S    +S D  VTRS+ + + N++
Subjt:  LHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSD

AT1G56220.1 Dormancy/auxin associated family protein3.0e-0435.82Show/hide
Query:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKISGD-------IPVTRSVFILR
        +L  LWD T+AGP  + G G LRKH +FS         SE+   +  G+       + VTRS+ I++
Subjt:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKISGD-------IPVTRSVFILR

AT1G56220.2 Dormancy/auxin associated family protein3.0e-0435.82Show/hide
Query:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKISGD-------IPVTRSVFILR
        +L  LWD T+AGP  + G G LRKH +FS         SE+   +  G+       + VTRS+ I++
Subjt:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKISGD-------IPVTRSVFILR

AT1G56220.3 Dormancy/auxin associated family protein3.0e-0435.82Show/hide
Query:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKISGD-------IPVTRSVFILR
        +L  LWD T+AGP  + G G LRKH +FS         SE+   +  G+       + VTRS+ I++
Subjt:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKISGD-------IPVTRSVFILR

AT1G56220.4 Dormancy/auxin associated family protein3.0e-0435.82Show/hide
Query:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKISGD-------IPVTRSVFILR
        +L  LWD T+AGP  + G G LRKH +FS         SE+   +  G+       + VTRS+ I++
Subjt:  VLHKLWDGTLAGPMSDTGFGMLRKHDSFSV--------SESPLVKISGD-------IPVTRSVFILR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCACGTTTAAAGGTGGCAGTTTTGTGGTTTTGAGATGCTGTAGGGGTAAAATTGGCATTTCAGAGGAAATCATGACTGCTGTTCTTCATAAGCTATGGGACGGAAC
GCTTGCAGGCCCTATGTCAGACACCGGCTTCGGAATGCTTCGCAAGCATGATTCCTTTTCGGTATCGGAATCGCCTCTAGTTAAGATTTCCGGTGACATTCCTGTAACTC
GGAGCGTCTTCATTCTCAGGAGTAACTCCGATTTTCTGGAGCTTCTCGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCACGTTTAAAGGTGGCAGTTTTGTGGTTTTGAGATGCTGTAGGGGTAAAATTGGCATTTCAGAGGAAATCATGACTGCTGTTCTTCATAAGCTATGGGACGGAAC
GCTTGCAGGCCCTATGTCAGACACCGGCTTCGGAATGCTTCGCAAGCATGATTCCTTTTCGGTATCGGAATCGCCTCTAGTTAAGATTTCCGGTGACATTCCTGTAACTC
GGAGCGTCTTCATTCTCAGGAGTAACTCCGATTTTCTGGAGCTTCTCGGATGA
Protein sequenceShow/hide protein sequence
MRTFKGGSFVVLRCCRGKIGISEEIMTAVLHKLWDGTLAGPMSDTGFGMLRKHDSFSVSESPLVKISGDIPVTRSVFILRSNSDFLELLG