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Carg18972 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18972
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS
Genome locationCarg_Chr17:5964335..5964834
RNA-Seq ExpressionCarg18972
SyntenyCarg18972
Gene Ontology termsGO:0009630 - gravitropism (biological process)
GO:0040008 - regulation of growth (biological process)
InterPro domainsIPR044683 - LAZY family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575434.1 hypothetical protein SDJN03_26073, partial [Cucurbita argyrosperma subsp. sororia]3.2e-6599.22Show/hide
Query:  EHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP
        +HNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP
Subjt:  EHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP

Query:  LCSDSDDKDEDIERTIGLIIGKCKDIWAD
        LCSDSDDKDEDIERTIGLIIGKCKDIWAD
Subjt:  LCSDSDDKDEDIERTIGLIIGKCKDIWAD

KAG7013977.1 hypothetical protein SDJN02_24147, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-66100Show/hide
Query:  MEHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISN
        MEHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISN
Subjt:  MEHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISN

Query:  PLCSDSDDKDEDIERTIGLIIGKCKDIWAD
        PLCSDSDDKDEDIERTIGLIIGKCKDIWAD
Subjt:  PLCSDSDDKDEDIERTIGLIIGKCKDIWAD

XP_022953613.1 uncharacterized protein LOC111456096 [Cucurbita moschata]3.2e-6599.22Show/hide
Query:  EHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP
        +HNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP
Subjt:  EHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP

Query:  LCSDSDDKDEDIERTIGLIIGKCKDIWAD
        LCSDSDDKDEDIERTIGLIIGKCKDIWAD
Subjt:  LCSDSDDKDEDIERTIGLIIGKCKDIWAD

XP_022992360.1 uncharacterized protein LOC111488695 [Cucurbita maxima]7.8e-6496.9Show/hide
Query:  EHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP
        +H KQESREEFSDWPHGLLAIGTFGNN+IKDEQDIQEEEDPSSSE+IVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP
Subjt:  EHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP

Query:  LCSDSDDKDEDIERTIGLIIGKCKDIWAD
        LCSDSDDKDEDIERTIGLIIGKCKDIWAD
Subjt:  LCSDSDDKDEDIERTIGLIIGKCKDIWAD

XP_023547536.1 uncharacterized protein LOC111806450 [Cucurbita pepo subsp. pepo]7.8e-6497.67Show/hide
Query:  EHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP
        +H KQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP
Subjt:  EHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP

Query:  LCSDSDDKDEDIERTIGLIIGKCKDIWAD
        LCSD DDKDEDIERTIGLIIGKCKDIWAD
Subjt:  LCSDSDDKDEDIERTIGLIIGKCKDIWAD

TrEMBL top hitse value%identityAlignment
A0A0A0K7Q1 Uncharacterized protein1.7e-5690.08Show/hide
Query:  HNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQ---EEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRIS
        H KQESREEFSDWPHGLLAIGTFGNNEIKD+ D +   EEE+PSSSEEIVD SPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRIS
Subjt:  HNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQ---EEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRIS

Query:  NPLCSDSDDKDEDIERTIGLIIGKCKDIWAD
        NPL SDSDDKDEDIERTI LIIGKCKDI AD
Subjt:  NPLCSDSDDKDEDIERTIGLIIGKCKDIWAD

A0A1S3CI43 uncharacterized protein LOC103500678 isoform X23.8e-5690Show/hide
Query:  HNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQ--EEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISN
        H KQESREEFSDWPHGLLAIGTFGNNEIKD+ + +  EEE+PSSSEEIVD SPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISN
Subjt:  HNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQ--EEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISN

Query:  PLCSDSDDKDEDIERTIGLIIGKCKDIWAD
        PL SDSDDKDEDIERTI LIIGKCKDI AD
Subjt:  PLCSDSDDKDEDIERTIGLIIGKCKDIWAD

A0A5A7UYW4 Uncharacterized protein3.8e-5690Show/hide
Query:  HNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQ--EEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISN
        H KQESREEFSDWPHGLLAIGTFGNNEIKD+ + +  EEE+PSSSEEIVD SPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISN
Subjt:  HNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQ--EEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISN

Query:  PLCSDSDDKDEDIERTIGLIIGKCKDIWAD
        PL SDSDDKDEDIERTI LIIGKCKDI AD
Subjt:  PLCSDSDDKDEDIERTIGLIIGKCKDIWAD

A0A6J1GNT0 uncharacterized protein LOC1114560961.5e-6599.22Show/hide
Query:  EHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP
        +HNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP
Subjt:  EHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP

Query:  LCSDSDDKDEDIERTIGLIIGKCKDIWAD
        LCSDSDDKDEDIERTIGLIIGKCKDIWAD
Subjt:  LCSDSDDKDEDIERTIGLIIGKCKDIWAD

A0A6J1JVH6 uncharacterized protein LOC1114886953.8e-6496.9Show/hide
Query:  EHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP
        +H KQESREEFSDWPHGLLAIGTFGNN+IKDEQDIQEEEDPSSSE+IVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP
Subjt:  EHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP

Query:  LCSDSDDKDEDIERTIGLIIGKCKDIWAD
        LCSDSDDKDEDIERTIGLIIGKCKDIWAD
Subjt:  LCSDSDDKDEDIERTIGLIIGKCKDIWAD

SwissProt top hitse value%identityAlignment
A0A072TLV8 Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS5.5e-4470.77Show/hide
Query:  KQESREEFSDWPHGLLAIGTFG-NNEIKD--EQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP
        K E REEFSDWPH LLAIGTFG NNEI    E    ++EDPSSSEE+ D +PEE+GKLQKELT+LL RKPN EK++++LPLDRFLNCPSSLEVDRRISN 
Subjt:  KQESREEFSDWPHGLLAIGTFG-NNEIKD--EQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNP

Query:  LCSDS-DDKDEDIERTIGLIIGKCKDIWAD
        LCS+S  DKDEDIE+T+ +I+ KCKDI A+
Subjt:  LCSDS-DDKDEDIERTIGLIIGKCKDIWAD

A0A251PW43 Protein DEEPER ROOTING 11.2e-4674.44Show/hide
Query:  KQESREEFSDWPHGLLAIGTFGNNEIK----DEQDIQEEEDPSSSEEIVD-ISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRIS
        KQE REEFSDWPHGLLAIGTFGNN++K    + QDIQ  EDP+SSEEI+D  +PEEVGKL KELTKLL+RKPN EK++ADLPLDRFLNCPSSLEVDRR S
Subjt:  KQESREEFSDWPHGLLAIGTFGNNEIK----DEQDIQEEEDPSSSEEIVD-ISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRIS

Query:  NPLCSDS--DDKDEDIERTIGLIIGKCKDIWAD
        N LCSDS  D KDEDIE+TI +I+G+CK+I  D
Subjt:  NPLCSDS--DDKDEDIERTIGLIIGKCKDIWAD

Q58G53 Protein LAZY 21.7e-3254.61Show/hide
Query:  HNKQESREEFSDWPHGLLAIGTFG--------------NNEIKDEQ----DIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQV-----AD
        H KQE REEFSDWPH LLAIGTFG              + EI+ E+      ++EE+PSSS  + D +PEEVGKLQKEL KLLSR    +  V      +
Subjt:  HNKQESREEFSDWPHGLLAIGTFG--------------NNEIKDEQ----DIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQV-----AD

Query:  LPLDRFLNCPSSLEVDRRISNPLC----SDSDDKDEDIERTIGLIIGKCKDI
        LPLDRFLNCPSSLEVDRRISN L     S  ++K+ED+ERTI +I+G+CK+I
Subjt:  LPLDRFLNCPSSLEVDRRISNPLC----SDSDDKDEDIERTIGLIIGKCKDI

Q5XVG3 Protein LAZY 41.7e-3256.55Show/hide
Query:  REEFSDWPHGLLAIGTFGNN----EIKDEQDIQEE----------------EDPSSSEEI-VDISPEEVGKLQKELTKLLS-----RKPNAEKQVADLPL
        REEF+DWPHGLLAIGTFGN     +  D++ IQEE                ++ SSS+++  D +PEEVGKLQKELTKLL+     RK +  +++A+LPL
Subjt:  REEFSDWPHGLLAIGTFGNN----EIKDEQDIQEE----------------EDPSSSEEI-VDISPEEVGKLQKELTKLLS-----RKPNAEKQVADLPL

Query:  DRFLNCPSSLEVDRRISNPLCSDSDDKDEDIERTIGLIIGKCKDI
        DRFLNCPSSLEVDRRISN LC   D+K+EDIERTI +I+G+CK I
Subjt:  DRFLNCPSSLEVDRRISNPLCSDSDDKDEDIERTIGLIIGKCKDI

Q69P88 Protein DEEPER ROOTING 11.1e-0744.93Show/hide
Query:  REEFSDWPHGLLAIGTFGNNEIKDEQDIQEEED-PSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQ
        ++EFSDWP  LLAIGTFGN +I++   ++   D   S ++ V  + EEV K++KE   LL+ K  AE Q
Subjt:  REEFSDWPHGLLAIGTFGNNEIKDEQDIQEEED-PSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQ

Arabidopsis top hitse value%identityAlignment
AT1G17400.1 unknown protein1.2e-3354.61Show/hide
Query:  HNKQESREEFSDWPHGLLAIGTFG--------------NNEIKDEQ----DIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQV-----AD
        H KQE REEFSDWPH LLAIGTFG              + EI+ E+      ++EE+PSSS  + D +PEEVGKLQKEL KLLSR    +  V      +
Subjt:  HNKQESREEFSDWPHGLLAIGTFG--------------NNEIKDEQ----DIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQV-----AD

Query:  LPLDRFLNCPSSLEVDRRISNPLC----SDSDDKDEDIERTIGLIIGKCKDI
        LPLDRFLNCPSSLEVDRRISN L     S  ++K+ED+ERTI +I+G+CK+I
Subjt:  LPLDRFLNCPSSLEVDRRISNPLC----SDSDDKDEDIERTIGLIIGKCKDI

AT1G72490.1 unknown protein1.2e-3356.55Show/hide
Query:  REEFSDWPHGLLAIGTFGNN----EIKDEQDIQEE----------------EDPSSSEEI-VDISPEEVGKLQKELTKLLS-----RKPNAEKQVADLPL
        REEF+DWPHGLLAIGTFGN     +  D++ IQEE                ++ SSS+++  D +PEEVGKLQKELTKLL+     RK +  +++A+LPL
Subjt:  REEFSDWPHGLLAIGTFGNN----EIKDEQDIQEE----------------EDPSSSEEI-VDISPEEVGKLQKELTKLLS-----RKPNAEKQVADLPL

Query:  DRFLNCPSSLEVDRRISNPLCSDSDDKDEDIERTIGLIIGKCKDI
        DRFLNCPSSLEVDRRISN LC   D+K+EDIERTI +I+G+CK I
Subjt:  DRFLNCPSSLEVDRRISNPLCSDSDDKDEDIERTIGLIIGKCKDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCATAATAAACAAGAGTCTCGTGAAGAGTTCAGCGATTGGCCTCATGGATTGCTAGCAATTGGAACTTTTGGCAACAATGAGATTAAAGATGAACAAGACATACA
AGAGGAGGAGGATCCATCTTCTTCAGAAGAGATAGTTGATATCTCTCCTGAAGAAGTTGGTAAATTACAGAAAGAGTTAACGAAGCTTTTATCTCGAAAACCGAACGCCG
AAAAGCAGGTTGCAGATCTTCCATTGGATAGATTTCTCAACTGTCCTTCAAGCTTGGAGGTTGACAGAAGAATCAGCAATCCACTTTGCAGTGATTCAGATGATAAAGAT
GAAGATATTGAAAGAACCATTGGTCTTATCATTGGGAAATGCAAAGACATTTGGGCTGAT
mRNA sequenceShow/hide mRNA sequence
ATGGAGCATAATAAACAAGAGTCTCGTGAAGAGTTCAGCGATTGGCCTCATGGATTGCTAGCAATTGGAACTTTTGGCAACAATGAGATTAAAGATGAACAAGACATACA
AGAGGAGGAGGATCCATCTTCTTCAGAAGAGATAGTTGATATCTCTCCTGAAGAAGTTGGTAAATTACAGAAAGAGTTAACGAAGCTTTTATCTCGAAAACCGAACGCCG
AAAAGCAGGTTGCAGATCTTCCATTGGATAGATTTCTCAACTGTCCTTCAAGCTTGGAGGTTGACAGAAGAATCAGCAATCCACTTTGCAGTGATTCAGATGATAAAGAT
GAAGATATTGAAAGAACCATTGGTCTTATCATTGGGAAATGCAAAGACATTTGGGCTGAT
Protein sequenceShow/hide protein sequence
MEHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNPLCSDSDDKD
EDIERTIGLIIGKCKDIWAD