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Carg18987 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18987
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr18:9627667..9630458
RNA-Seq ExpressionCarg18987
SyntenyCarg18987
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573882.1 hypothetical protein SDJN03_27769, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1646.27Show/hide
Query:  MPFIPRHEQVRHPLS---------------------------------------------------------------------RMIENVDGLKVAPTSR
        MPFIPRHEQVRHPLS                                                                     RMIENVDGLKVAPTSR
Subjt:  MPFIPRHEQVRHPLS---------------------------------------------------------------------RMIENVDGLKVAPTSR

Query:  AIQSLLPPYDVEKLIEKLAFVSHVQQVFDEGICS
        AIQSLLPPYDVEKLIEKLAFVSHVQQVFDE + S
Subjt:  AIQSLLPPYDVEKLIEKLAFVSHVQQVFDEGICS
KAG7012947.1 hypothetical protein SDJN02_25700, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-81100Show/hide
Query:  MENSAAEDLVNPESALTPRDLSCNLSCRLPAIVNSAAEDLESPESWKVADSRSLIGCFVRLFRILANAYRCIIYIEHVVVVKQPEMPFIPRHEQVRHPLS
        MENSAAEDLVNPESALTPRDLSCNLSCRLPAIVNSAAEDLESPESWKVADSRSLIGCFVRLFRILANAYRCIIYIEHVVVVKQPEMPFIPRHEQVRHPLS
Subjt:  MENSAAEDLVNPESALTPRDLSCNLSCRLPAIVNSAAEDLESPESWKVADSRSLIGCFVRLFRILANAYRCIIYIEHVVVVKQPEMPFIPRHEQVRHPLS

Query:  RMIENVDGLKVAPTSRAIQSLLPPYDVEKLIEKLAFVSHVQQVFDEGICSEHSGG
        RMIENVDGLKVAPTSRAIQSLLPPYDVEKLIEKLAFVSHVQQVFDEGICSEHSGG
Subjt:  RMIENVDGLKVAPTSRAIQSLLPPYDVEKLIEKLAFVSHVQQVFDEGICSEHSGG
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACTCTGCAGCAGAGGATCTCGTAAATCCTGAGTCAGCCTTAACTCCTAGAGATTTATCATGCAATCTGAGTTGTCGATTACCTGCGATCGTTAACTCTGCAGC
AGAGGATCTCGAAAGTCCTGAGTCATGGAAGGTCGCCGACTCTCGATCGTTGATCGGTTGCTTCGTGAGGCTTTTCAGAATCCTTGCAAACGCCTATCGATGCATAATCT
ACATTGAGCACGTAGTGGTGGTGAAGCAGCCTGAAATGCCTTTTATTCCTCGTCATGAGCAAGTTCGTCATCCCCTTTCTCGAATGATCGAGAATGTCGATGGACTGAAA
GTTGCACCAACAAGCAGAGCTATACAATCTCTTTTGCCTCCCTATGACGTTGAAAAGTTAATAGAAAAACTAGCATTCGTCTCGCATGTGCAGCAGGTCTTCGACGAAGG
TATTTGCTCTGAACATAGCGGAGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACTCTGCAGCAGAGGATCTCGTAAATCCTGAGTCAGCCTTAACTCCTAGAGATTTATCATGCAATCTGAGTTGTCGATTACCTGCGATCGTTAACTCTGCAGC
AGAGGATCTCGAAAGTCCTGAGTCATGGAAGGTCGCCGACTCTCGATCGTTGATCGGTTGCTTCGTGAGGCTTTTCAGAATCCTTGCAAACGCCTATCGATGCATAATCT
ACATTGAGCACGTAGTGGTGGTGAAGCAGCCTGAAATGCCTTTTATTCCTCGTCATGAGCAAGTTCGTCATCCCCTTTCTCGAATGATCGAGAATGTCGATGGACTGAAA
GTTGCACCAACAAGCAGAGCTATACAATCTCTTTTGCCTCCCTATGACGTTGAAAAGTTAATAGAAAAACTAGCATTCGTCTCGCATGTGCAGCAGGTCTTCGACGAAGG
TATTTGCTCTGAACATAGCGGAGGGTAAATTTAAAAAATACC
Protein sequenceShow/hide protein sequence
MENSAAEDLVNPESALTPRDLSCNLSCRLPAIVNSAAEDLESPESWKVADSRSLIGCFVRLFRILANAYRCIIYIEHVVVVKQPEMPFIPRHEQVRHPLSRMIENVDGLK
VAPTSRAIQSLLPPYDVEKLIEKLAFVSHVQQVFDEGICSEHSGG