; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18995 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18995
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionglycine-rich RNA-binding protein GRP1A-like
Genome locationCarg_Chr18:9671516..9672811
RNA-Seq ExpressionCarg18995
SyntenyCarg18995
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573889.1 hypothetical protein SDJN03_27776, partial [Cucurbita argyrosperma subsp. sororia]3.9e-4794.02Show/hide
Query:  ESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQRRRGRPVNAGTRHE
        ESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGA  G    GGARGGGGVSSPHTGGSAVIPIYVAGSAQAQRRRGRPVNAG RHE
Subjt:  ESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQRRRGRPVNAGTRHE

Query:  NNMWLLVAAALAAIAHL
        NNMWLLVAAALAAIAHL
Subjt:  NNMWLLVAAALAAIAHL

KAG7012953.1 hypothetical protein SDJN02_25707, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-60100Show/hide
Query:  MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQ
        MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQ
Subjt:  MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQ

Query:  RRRGRPVNAGTRHENNMWLLVAAALAAIAHL
        RRRGRPVNAGTRHENNMWLLVAAALAAIAHL
Subjt:  RRRGRPVNAGTRHENNMWLLVAAALAAIAHL

XP_022945097.1 uncharacterized protein LOC111449437 isoform X1 [Cucurbita moschata]2.2e-5392.37Show/hide
Query:  MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQ
        MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAH          GGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQ
Subjt:  MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQ

Query:  RRRGRPVNAGTRHENNMWLLVAAALAAIAHL
        RRRGRPVNAGTRHENNMWLLVAAALAAIAHL
Subjt:  RRRGRPVNAGTRHENNMWLLVAAALAAIAHL

XP_022945098.1 uncharacterized protein LOC111449437 isoform X2 [Cucurbita moschata]7.7e-5188.55Show/hide
Query:  MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQ
        MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHG               GGARGGGGVSSPHTGGSAVIPIYVAGSAQAQ
Subjt:  MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQ

Query:  RRRGRPVNAGTRHENNMWLLVAAALAAIAHL
        RRRGRPVNAGTRHENNMWLLVAAALAAIAHL
Subjt:  RRRGRPVNAGTRHENNMWLLVAAALAAIAHL

XP_022968347.1 uncharacterized protein LOC111467612 isoform X2 [Cucurbita maxima]1.3e-4586.05Show/hide
Query:  IASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHT-GGSAVIPIYVAGSAQAQRR
        IASSLQEIL TESNCHQKTNTEKHGEDGATNQIGRRN ACAITVSQAVAH          GGGASRGGA  GGGVSSPHT GGSAVIPIYVAGSAQAQRR
Subjt:  IASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHT-GGSAVIPIYVAGSAQAQRR

Query:  RGRPVNAGTRHENNMWLLVAAALAAIAHL
        RGRPVNAG RHEN+MWLLVAAALAA AHL
Subjt:  RGRPVNAGTRHENNMWLLVAAALAAIAHL

TrEMBL top hitse value%identityAlignment
A0A6J1FZV5 uncharacterized protein LOC111449437 isoform X23.7e-5188.55Show/hide
Query:  MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQ
        MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHG               GGARGGGGVSSPHTGGSAVIPIYVAGSAQAQ
Subjt:  MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQ

Query:  RRRGRPVNAGTRHENNMWLLVAAALAAIAHL
        RRRGRPVNAGTRHENNMWLLVAAALAAIAHL
Subjt:  RRRGRPVNAGTRHENNMWLLVAAALAAIAHL

A0A6J1G000 uncharacterized protein LOC111449437 isoform X11.0e-5392.37Show/hide
Query:  MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQ
        MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAH          GGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQ
Subjt:  MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQ

Query:  RRRGRPVNAGTRHENNMWLLVAAALAAIAHL
        RRRGRPVNAGTRHENNMWLLVAAALAAIAHL
Subjt:  RRRGRPVNAGTRHENNMWLLVAAALAAIAHL

A0A6J1HTB9 uncharacterized protein LOC111467612 isoform X26.1e-4686.05Show/hide
Query:  IASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHT-GGSAVIPIYVAGSAQAQRR
        IASSLQEIL TESNCHQKTNTEKHGEDGATNQIGRRN ACAITVSQAVAH          GGGASRGGA  GGGVSSPHT GGSAVIPIYVAGSAQAQRR
Subjt:  IASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHT-GGSAVIPIYVAGSAQAQRR

Query:  RGRPVNAGTRHENNMWLLVAAALAAIAHL
        RGRPVNAG RHEN+MWLLVAAALAA AHL
Subjt:  RGRPVNAGTRHENNMWLLVAAALAAIAHL

A0A6J1HUL7 uncharacterized protein LOC111467612 isoform X11.8e-4586.92Show/hide
Query:  IASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGA-RGGGARGGGASRGGARGGGGVSSPHT-GGSAVIPIYVAGSAQAQR
        IASSLQEIL TESNCHQKTNTEKHGEDGATNQIGRRN ACAITVSQAVAHGGGA RGGG        GGA  GGGVSSPHT GGSAVIPIYVAGSAQAQR
Subjt:  IASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGA-RGGGARGGGASRGGARGGGGVSSPHT-GGSAVIPIYVAGSAQAQR

Query:  RRGRPVNAGTRHENNMWLLVAAALAAIAHL
        RRGRPVNAG RHEN+MWLLVAAALAA AHL
Subjt:  RRGRPVNAGTRHENNMWLLVAAALAAIAHL

A0A6J1JB47 uncharacterized protein LOC1114851592.5e-2360Show/hide
Query:  AIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQR
        AI ++  Q+ILPTE N HQKTN EKHG+DG TN+I    SA AITVSQ + HG  A GGG  GGG   G  + GG       GG+AVIP+Y AGSAQA  
Subjt:  AIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQR

Query:  RRGRPVNAGTRHENNMWLLVAAALAAIAHL
        R+GRP NAG  +ENNM LLVA+ LAAIAHL
Subjt:  RRGRPVNAGTRHENNMWLLVAAALAAIAHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATAATAGCATCTTCTCTGCAAGAAATCTTGCCAACAGAGTCCAATTGCCACCAGAAAACTAACACAGAAAAACATGGCGAAGATGGGGCTACTAACCAGATTGG
CAGAAGAAACAGTGCATGTGCGATCACCGTTTCTCAGGCGGTTGCTCATGGAGGTGGTGCAAGGGGAGGTGGTGCCAGGGGAGGTGGTGCCAGCAGAGGTGGTGCCAGGG
GAGGTGGTGGTGTTAGTAGTCCTCATACAGGAGGTAGTGCCGTAATCCCCATTTACGTAGCTGGTTCAGCGCAAGCACAACGCCGCCGAGGTCGACCAGTCAATGCAGGA
ACTCGCCATGAGAACAACATGTGGCTTCTGGTAGCTGCAGCTTTGGCTGCCATTGCACATCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATAATAGCATCTTCTCTGCAAGAAATCTTGCCAACAGAGTCCAATTGCCACCAGAAAACTAACACAGAAAAACATGGCGAAGATGGGGCTACTAACCAGATTGG
CAGAAGAAACAGTGCATGTGCGATCACCGTTTCTCAGGCGGTTGCTCATGGAGGTGGTGCAAGGGGAGGTGGTGCCAGGGGAGGTGGTGCCAGCAGAGGTGGTGCCAGGG
GAGGTGGTGGTGTTAGTAGTCCTCATACAGGAGGTAGTGCCGTAATCCCCATTTACGTAGCTGGTTCAGCGCAAGCACAACGCCGCCGAGGTCGACCAGTCAATGCAGGA
ACTCGCCATGAGAACAACATGTGGCTTCTGGTAGCTGCAGCTTTGGCTGCCATTGCACATCTGTAA
Protein sequenceShow/hide protein sequence
MAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACAITVSQAVAHGGGARGGGARGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQRRRGRPVNAG
TRHENNMWLLVAAALAAIAHL