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Carg19017 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19017
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr18:9789268..9791564
RNA-Seq ExpressionCarg19017
SyntenyCarg19017
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573909.1 hypothetical protein SDJN03_27796, partial [Cucurbita argyrosperma subsp. sororia]8.2e-1046.34Show/hide
Query:  MGNANADVEMER----------SRSPAAPPPSFDQDESPV---ACLAAA--------------PTYLFLRHWPPARPLTTSSF------AVGSILFSKAT
        MGNANADVEMER             P+ P P      + V   +C +AA                YLF+      R  +   F       VGSILFSKAT
Subjt:  MGNANADVEMER----------SRSPAAPPPSFDQDESPV---ACLAAA--------------PTYLFLRHWPPARPLTTSSF------AVGSILFSKAT

Query:  FEEDNMKTTISEDIDTIFVSLHI
        FEEDNMKTTISEDIDTIFVSLHI
Subjt:  FEEDNMKTTISEDIDTIFVSLHI
KAG7012975.1 hypothetical protein SDJN02_25729, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-62100Show/hide
Query:  MGNANADVEMERSRSPAAPPPSFDQDESPVACLAAAPTYLFLRHWPPARPLTTSSFAVGSILFSKATFEEDNMKTTISEDIDTIFVSLHISSKCRRRPLL
        MGNANADVEMERSRSPAAPPPSFDQDESPVACLAAAPTYLFLRHWPPARPLTTSSFAVGSILFSKATFEEDNMKTTISEDIDTIFVSLHISSKCRRRPLL
Subjt:  MGNANADVEMERSRSPAAPPPSFDQDESPVACLAAAPTYLFLRHWPPARPLTTSSFAVGSILFSKATFEEDNMKTTISEDIDTIFVSLHISSKCRRRPLL

Query:  LAMLIRSYLLFFNQVCDIISPRVDS
        LAMLIRSYLLFFNQVCDIISPRVDS
Subjt:  LAMLIRSYLLFFNQVCDIISPRVDS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATGCAAATGCCGACGTTGAGATGGAACGGTCGCGCTCTCCTGCAGCTCCGCCGCCGTCGTTCGACCAAGACGAATCGCCGGTCGCTTGTCTCGCCGCCGCGCC
TACCTATTTGTTCCTTCGTCATTGGCCACCCGCACGGCCTCTAACCACTTCTTCCTTCGCTGTTGGGTCGATATTATTTTCGAAAGCTACTTTTGAAGAAGATAACATGA
AGACAACAATATCTGAAGACATCGACACCATTTTCGTTAGCTTGCATATATCTAGTAAATGTCGACGCCGCCCCCTACTGCTGGCAATGTTAATTCGAAGTTACCTCCTT
TTTTTTAATCAAGTCTGTGATATTATAAGTCCAAGAGTGGACTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATGCAAATGCCGACGTTGAGATGGAACGGTCGCGCTCTCCTGCAGCTCCGCCGCCGTCGTTCGACCAAGACGAATCGCCGGTCGCTTGTCTCGCCGCCGCGCC
TACCTATTTGTTCCTTCGTCATTGGCCACCCGCACGGCCTCTAACCACTTCTTCCTTCGCTGTTGGGTCGATATTATTTTCGAAAGCTACTTTTGAAGAAGATAACATGA
AGACAACAATATCTGAAGACATCGACACCATTTTCGTTAGCTTGCATATATCTAGTAAATGTCGACGCCGCCCCCTACTGCTGGCAATGTTAATTCGAAGTTACCTCCTT
TTTTTTAATCAAGTCTGTGATATTATAAGTCCAAGAGTGGACTCTTAA
Protein sequenceShow/hide protein sequence
MGNANADVEMERSRSPAAPPPSFDQDESPVACLAAAPTYLFLRHWPPARPLTTSSFAVGSILFSKATFEEDNMKTTISEDIDTIFVSLHISSKCRRRPLLLAMLIRSYLL
FFNQVCDIISPRVDS