; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg19058 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19058
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionacyl-acyl carrier protein thioesterase ATL3, chloroplastic-like
Genome locationCarg_Chr18:10039054..10039946
RNA-Seq ExpressionCarg19058
SyntenyCarg19058
Gene Ontology termsNA
InterPro domainsIPR029069 - HotDog domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013015.1 Acyl-acyl carrier protein thioesterase ATL4, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-71100Show/hide
Query:  MTTPKCSPPRTSDLNTNPTIQPSPYRMDGFVDYEMKVRGYELDSSGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQK
        MTTPKCSPPRTSDLNTNPTIQPSPYRMDGFVDYEMKVRGYELDSSGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQK
Subjt:  MTTPKCSPPRTSDLNTNPTIQPSPYRMDGFVDYEMKVRGYELDSSGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQK

Query:  YLSKLAQFIHDHNQSNRLTVGIKDDDKDGANIQHG
        YLSKLAQFIHDHNQSNRLTVGIKDDDKDGANIQHG
Subjt:  YLSKLAQFIHDHNQSNRLTVGIKDDDKDGANIQHG

XP_022945226.1 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Cucurbita moschata]9.3e-6068.82Show/hide
Query:  MTTPKCSPPRTSDLNTNPTIQPSPYRMDGFVDYEMKVRGYELDS----------------------------------------------------SGDR
        MTTPKCSPPRT DLNTNPTIQPSPYRMDGFVDYEMKVRGYELD                                                     SGDR
Subjt:  MTTPKCSPPRTSDLNTNPTIQPSPYRMDGFVDYEMKVRGYELDS----------------------------------------------------SGDR

Query:  FVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHNQSNRLTVGIKDDDKDGANIQH
        FVLKMRFLDISKAR+YLEHKIFKLPNMEAILEAQVTGVWLSKN RPMRIPQKYLSK AQFIHDHNQSNR TVGIKDDDKDGANIQH
Subjt:  FVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHNQSNRLTVGIKDDDKDGANIQH

XP_022967991.1 acyl-acyl carrier protein thioesterase ATL4, chloroplastic-like [Cucurbita maxima]5.5e-3689.53Show/hide
Query:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHNQSNRLTVGIKDDDKDGA
        SG RFVLKMRFLDISKAR+Y+EHKIFKLPNMEAILEAQVT VWL+KNHRPM+IPQKYLSK AQFIHDHNQSNR TVGIKDD+KDGA
Subjt:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHNQSNRLTVGIKDDDKDGA

XP_023541638.1 acyl-acyl carrier protein thioesterase ATL4, chloroplastic-like [Cucurbita pepo subsp. pepo]3.7e-5665.78Show/hide
Query:  MTTPKCSPPRTSDLNTNPTIQPSPYRMDGFVDYEMKVRGYELDS----------------------------------------------------SGDR
        MTTPKCS PRT DLNTNP IQPSPYRMDGFVDYEMKVRGYELD                                                     SGDR
Subjt:  MTTPKCSPPRTSDLNTNPTIQPSPYRMDGFVDYEMKVRGYELDS----------------------------------------------------SGDR

Query:  FVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHNQSNRLTVGIKDDDKDGANIQHG
        FVLKMRFLDISKA +YLEHKIFKLPNMEAIL AQVT VWLSKNHRPMRIP KYLSK AQFIHDHNQSNR  VGIKDDDKDGANIQHG
Subjt:  FVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHNQSNRLTVGIKDDDKDGANIQHG

XP_038893138.1 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Benincasa hispida]1.6e-1940.88Show/hide
Query:  CSPPRTSDLNTNPTIQPSPYRMDGFVDYEMKVRGYELDS----------------------------------------------------SGDRFVLKM
        C+  +TS   T    Q   Y+MD F ++E+KVR YELD                                                     SGDRFVLK+
Subjt:  CSPPRTSDLNTNPTIQPSPYRMDGFVDYEMKVRGYELDS----------------------------------------------------SGDRFVLKM

Query:  RFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDH
        RF  IS+AR+Y+EH IFKLPNME ILEA  T VWL+K++RP+RIPQ++LSKL QF+ DH
Subjt:  RFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDH

TrEMBL top hitse value%identityAlignment
A0A1S3BG49 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like4.7e-1764.71Show/hide
Query:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDH
        SGD+FV+K+R   IS AR Y++H IFKLPNME ILEA+ T VWL+KN+RP+RIPQ++LSK  QF+ DH
Subjt:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDH

A0A5A7SVA0 Acyl-acyl carrier protein thioesterase ATL34.7e-1764.71Show/hide
Query:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDH
        SGD+FV+K+R   IS AR Y++H IFKLPNME ILEA+ T VWL+KN+RP+RIPQ++LSK  QF+ DH
Subjt:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDH

A0A6J1G097 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like4.5e-6068.82Show/hide
Query:  MTTPKCSPPRTSDLNTNPTIQPSPYRMDGFVDYEMKVRGYELDS----------------------------------------------------SGDR
        MTTPKCSPPRT DLNTNPTIQPSPYRMDGFVDYEMKVRGYELD                                                     SGDR
Subjt:  MTTPKCSPPRTSDLNTNPTIQPSPYRMDGFVDYEMKVRGYELDS----------------------------------------------------SGDR

Query:  FVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHNQSNRLTVGIKDDDKDGANIQH
        FVLKMRFLDISKAR+YLEHKIFKLPNMEAILEAQVTGVWLSKN RPMRIPQKYLSK AQFIHDHNQSNR TVGIKDDDKDGANIQH
Subjt:  FVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHNQSNRLTVGIKDDDKDGANIQH

A0A6J1HST6 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like8.1e-1762.32Show/hide
Query:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHN
        SGDRFV+K+R   +S AR Y++H IFKLPNME ILEA+ T VWL+K++RP+RIPQ++ SK AQF+ DH+
Subjt:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHN

A0A6J1HTM2 acyl-acyl carrier protein thioesterase ATL4, chloroplastic-like2.7e-3689.53Show/hide
Query:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHNQSNRLTVGIKDDDKDGA
        SG RFVLKMRFLDISKAR+Y+EHKIFKLPNMEAILEAQVT VWL+KNHRPM+IPQKYLSK AQFIHDHNQSNR TVGIKDD+KDGA
Subjt:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHNQSNRLTVGIKDDDKDGA

SwissProt top hitse value%identityAlignment
F4HX80 Acyl-acyl carrier protein thioesterase ATL4, chloroplastic3.1e-1349.28Show/hide
Query:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHN
        SGD+FV+K+     S AR+Y +H I KLPN E ILEA+ T VWL   HRP+RIP    SK   F+  ++
Subjt:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHN

Q8W583 Acyl-acyl carrier protein thioesterase ATL3, chloroplastic1.5e-1252.31Show/hide
Query:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFI
        SGD+FV+K R    S AR+Y +H IFKLPN E ILEA+   VWL   +RP+RIP    SK   F+
Subjt:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFI

Q9C7I8 Acyl-acyl carrier protein thioesterase ATL2, chloroplastic1.9e-1050Show/hide
Query:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDH
        SG RFV+K R   IS  R+Y E  IFKLPN E ILEA+ T VWL   +RP R+P    S    F   H
Subjt:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDH

S4TE15 Acyl-acyl carrier protein thioesterase TE3, chloroplastic3.3e-1556.72Show/hide
Query:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHD
        SGD+FV+K+R    S AR+Y +H IFKLPN E IL+A+ T VWL KN+RP+RIP +  SKL QF+ +
Subjt:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHD

S4TEF7 Acyl-acyl carrier protein thioesterase TE1, chloroplastic6.1e-1445.68Show/hide
Query:  DGFVDYEMKVRGYELDSSGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQF
        D     E+ ++       GD+FV+K+R+  IS  R Y EHKIFKLPN E ILEA+ T +WL+K +RP R+P +  S L +F
Subjt:  DGFVDYEMKVRGYELDSSGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQF

Arabidopsis top hitse value%identityAlignment
AT1G35250.1 Thioesterase superfamily protein1.3e-1150Show/hide
Query:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDH
        SG RFV+K R   IS  R+Y E  IFKLPN E ILEA+ T VWL   +RP R+P    S    F   H
Subjt:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDH

AT1G35290.1 Thioesterase superfamily protein1.5e-1047.06Show/hide
Query:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDH
        SG +FV+K R    S  R+Y E  IFKLPN E ILEA+   VWL K +RP+ IP    S    F   H
Subjt:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDH

AT1G68260.1 Thioesterase superfamily protein1.1e-1352.31Show/hide
Query:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFI
        SGD+FV+K R    S AR+Y +H IFKLPN E ILEA+   VWL   +RP+RIP    SK   F+
Subjt:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFI

AT1G68280.1 Thioesterase superfamily protein2.2e-1449.28Show/hide
Query:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHN
        SGD+FV+K+     S AR+Y +H I KLPN E ILEA+ T VWL   HRP+RIP    SK   F+  ++
Subjt:  SGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIHDHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTCCCAAATGCTCTCCCCCACGAACATCTGATCTCAATACTAACCCTACTATTCAACCTAGCCCTTATCGAATGGATGGGTTCGTAGACTATGAGATGAAAGT
TCGTGGTTATGAGTTGGATTCAAGCGGAGATCGATTTGTTCTTAAGATGAGGTTTTTGGACATCTCAAAAGCTCGGGTCTACCTCGAGCACAAAATTTTCAAGCTACCAA
ATATGGAGGCAATCTTAGAGGCACAGGTGACGGGAGTTTGGCTTAGCAAAAATCATCGTCCAATGCGGATCCCACAAAAATATTTATCCAAATTGGCTCAATTTATTCAT
GATCATAATCAATCTAACAGATTAACGGTCGGGATTAAAGACGATGACAAAGATGGAGCCAATATACAGCACGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGACAACTCCCAAATGCTCTCCCCCACGAACATCTGATCTCAATACTAACCCTACTATTCAACCTAGCCCTTATCGAATGGATGGGTTCGTAGACTATGAGATGAAAGT
TCGTGGTTATGAGTTGGATTCAAGCGGAGATCGATTTGTTCTTAAGATGAGGTTTTTGGACATCTCAAAAGCTCGGGTCTACCTCGAGCACAAAATTTTCAAGCTACCAA
ATATGGAGGCAATCTTAGAGGCACAGGTGACGGGAGTTTGGCTTAGCAAAAATCATCGTCCAATGCGGATCCCACAAAAATATTTATCCAAATTGGCTCAATTTATTCAT
GATCATAATCAATCTAACAGATTAACGGTCGGGATTAAAGACGATGACAAAGATGGAGCCAATATACAGCACGGATAG
Protein sequenceShow/hide protein sequence
MTTPKCSPPRTSDLNTNPTIQPSPYRMDGFVDYEMKVRGYELDSSGDRFVLKMRFLDISKARVYLEHKIFKLPNMEAILEAQVTGVWLSKNHRPMRIPQKYLSKLAQFIH
DHNQSNRLTVGIKDDDKDGANIQHG