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Carg19067 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19067
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionThiF domain-containing protein
Genome locationCarg_Chr11:12186458..12186838
RNA-Seq ExpressionCarg19067
SyntenyCarg19067
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022864.1 hypothetical protein SDJN02_16600, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-62100Show/hide
Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLSSSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

XP_022135897.1 uncharacterized protein LOC111007734 [Momordica charantia]4.6e-5388.1Show/hide
Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSR F RS  S SE+FHKYLKPGALAQIRNSRMIARFNRVNL+SQIYS R SSLSPP+AP+DS LLQVNIVDASPCFAGRVYGP CLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLS SPTNL PDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

XP_022930695.1 uncharacterized protein LOC111437092 [Cucurbita moschata]7.1e-6298.41Show/hide
Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNL+SQIYSTR SSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLSSSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

XP_022989505.1 uncharacterized protein LOC111486563 [Cucurbita maxima]2.1e-6198.41Show/hide
Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNL+SQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLSSS TNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

XP_023530330.1 uncharacterized protein LOC111792933 [Cucurbita pepo subsp. pepo]1.2e-6198.41Show/hide
Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSRAF RSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNL+SQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLSSSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

TrEMBL top hitse value%identityAlignment
A0A6J1C424 uncharacterized protein LOC1110077342.2e-5388.1Show/hide
Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSR F RS  S SE+FHKYLKPGALAQIRNSRMIARFNRVNL+SQIYS R SSLSPP+AP+DS LLQVNIVDASPCFAGRVYGP CLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLS SPTNL PDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

A0A6J1EXJ2 uncharacterized protein LOC1114370923.4e-6298.41Show/hide
Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNL+SQIYSTR SSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLSSSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

A0A6J1GLZ8 uncharacterized protein LOC1114552016.5e-5389.76Show/hide
Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAK-
        MNRRSR   RS  SHSETFHKYLKPGALAQIRNSRMIARFNRVNL+SQIYSTRSSSLSP TAPI S LLQVNI DASPCFAGRVYGPLCLQRKKLLAAK 
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAK-

Query:  SLWFLSSSPTNLTPDSPPDPVIEVLGG
        SLWFL+SSPTNLTPDSPPDPVI VLGG
Subjt:  SLWFLSSSPTNLTPDSPPDPVIEVLGG

A0A6J1HVZ0 uncharacterized protein LOC1114683462.6e-4985.04Show/hide
Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAK-
        MNRRSR   RS  SHSETFHKYLKPGALAQIRNSRMIARFNRVNL+SQIYSTR SSLS  T P+ S LLQVN+ DASPCFAGRVYGPLCLQRKKLLAAK 
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAK-

Query:  SLWFLSSSPTNLTPDSPPDPVIEVLGG
        SLWFL+SS TNLTPDSPPDPVI VLGG
Subjt:  SLWFLSSSPTNLTPDSPPDPVIEVLGG

A0A6J1JMJ5 uncharacterized protein LOC1114865631.0e-6198.41Show/hide
Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNL+SQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLSSS TNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G26960.1 unknown protein1.7e-0834.55Show/hide
Query:  RAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDS---ALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKSLW
        +   RS    ++ FH+Y+KPGALAQIRN    AR N       +  + S  + PP++  +S   A  Q   +D  P    ++YGP  + RKKL  A+S  
Subjt:  RAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDS---ALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKSLW

Query:  F-LSSSPTNL
          L+ SP ++
Subjt:  F-LSSSPTNL

AT5G54970.1 unknown protein3.0e-1040.43Show/hide
Query:  RSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVN--IVDASPCFAGRVYGPLCLQRKKLLAAKSL
        +S    S+ FH+YLKPGALAQIRNSR+ AR     +     S     +SP    +D A        +D  P    ++YGP   QRKKL AA+S+
Subjt:  RSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVN--IVDASPCFAGRVYGPLCLQRKKLLAAKSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCGAAGATCCAGAGCGTTTCCCCGATCGTCCAAATCTCACTCCGAGACGTTCCATAAGTATCTAAAGCCCGGTGCTCTAGCGCAAATTCGGAATTCCCGGATGAT
CGCTCGATTCAATCGTGTCAATTTGATATCTCAGATCTACTCCACTCGTTCCTCATCGCTTTCGCCGCCGACTGCGCCGATCGACTCCGCTTTGCTTCAGGTGAACATTG
TTGATGCTTCTCCTTGCTTTGCTGGGAGGGTGTACGGTCCACTCTGCTTGCAGAGGAAGAAACTTTTGGCTGCTAAGTCGTTGTGGTTTCTTAGTTCTAGTCCGACGAAT
TTGACTCCTGATTCTCCGCCTGATCCGGTTATTGAAGTGTTAGGGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCGAAGATCCAGAGCGTTTCCCCGATCGTCCAAATCTCACTCCGAGACGTTCCATAAGTATCTAAAGCCCGGTGCTCTAGCGCAAATTCGGAATTCCCGGATGAT
CGCTCGATTCAATCGTGTCAATTTGATATCTCAGATCTACTCCACTCGTTCCTCATCGCTTTCGCCGCCGACTGCGCCGATCGACTCCGCTTTGCTTCAGGTGAACATTG
TTGATGCTTCTCCTTGCTTTGCTGGGAGGGTGTACGGTCCACTCTGCTTGCAGAGGAAGAAACTTTTGGCTGCTAAGTCGTTGTGGTTTCTTAGTTCTAGTCCGACGAAT
TTGACTCCTGATTCTCCGCCTGATCCGGTTATTGAAGTGTTAGGGGGGTGA
Protein sequenceShow/hide protein sequence
MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLISQIYSTRSSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKSLWFLSSSPTN
LTPDSPPDPVIEVLGG