CuGenDBv2

Gene ID	Carg19075
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	sigma intracellular receptor 2-like
Genome location	Carg_Chr11:12233999..12236080
RNA-Seq Expression	Carg19075
Synteny	Carg19075
Gene Ontology terms	GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR016964 - Sigma intracellular receptor 2 IPR033118 - EXPERA domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6589170.1 Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia]

6.7e-84

99.4

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Query:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
        M ALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
Subjt:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY

Query:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
        GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
Subjt:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA

XP_022930653.1 sigma intracellular receptor 2-like [Cucurbita moschata]

1.3e-84

100

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Query:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
        MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
Subjt:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY

Query:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
        GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
Subjt:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA

XP_022952624.1 sigma intracellular receptor 2-like [Cucurbita moschata]

4.8e-66

78.31

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Query:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
        MGALLKLVD LLFLAFLLLA+V PLIDFQ +FP++ +P F+IDLK WY+ QSGDY+MA++PHFVVGL+W ELLFQWPLL LNLYAFL++K WY TTCLIY
Subjt:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY

Query:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
        GVSLV+SMSA +GE+VGSNRASNTL+TIY+PF+GLGVLA LRGLV CSSKA I G RPSNGRKKRA
Subjt:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA

XP_022988976.1 sigma intracellular receptor 2-like [Cucurbita maxima]

2.6e-80

95.78

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Query:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
        MGALLKLVD LLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLK WYVAQSGDYLM EAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAW+ TTCLIY
Subjt:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY

Query:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
        GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLA LRGLVPCSSKA INGPRPSNGRKKRA
Subjt:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA

XP_023530196.1 sigma intracellular receptor 2-like [Cucurbita pepo subsp. pepo]

4.2e-78

93.37

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Query:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
        MGALLKLVD LLFLAFL+LAVVVPLIDFQEV PKS YPD VIDLKRWYVA+SGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAF SSKAWY+TTCLIY
Subjt:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY

Query:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
        GVSLVSSMSA MGEVVGSNRASNTLLTIYWPFMGLGVLA LRGLVPCSSKA INGPRPSNGRKKRA
Subjt:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K5K2 EXPERA domain-containing protein

5.9e-62

74.7

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Query:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
        MGA LKL+DVLLFL FL+LA++ PLIDFQ +FP + +PDF+IDLK  Y  Q GDYLMAE+P F+VGL+W EL FQWP++ LNLYAFL+SK WY TTCLIY
Subjt:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY

Query:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
        GVS+VSSMSA +GE+VGSNRAS TLLTIY+PF+GLGVLA LRGLVPCSSKA I G RPSNGRKKRA
Subjt:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA

A0A6J1EVW1 sigma intracellular receptor 2-like

6.5e-85

100

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Query:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
        MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
Subjt:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY

Query:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
        GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
Subjt:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA

A0A6J1GM86 sigma intracellular receptor 2-like

2.3e-66

78.31

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Query:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
        MGALLKLVD LLFLAFLLLA+V PLIDFQ +FP++ +P F+IDLK WY+ QSGDY+MA++PHFVVGL+W ELLFQWPLL LNLYAFL++K WY TTCLIY
Subjt:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY

Query:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
        GVSLV+SMSA +GE+VGSNRASNTL+TIY+PF+GLGVLA LRGLV CSSKA I G RPSNGRKKRA
Subjt:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA

A0A6J1HVX1 sigma intracellular receptor 2-like

2.0e-65

77.71

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Query:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
        MGALLKLVD LLFLAFLLLA+V PLIDFQ +FP++ +P F+IDLK WY+ QSGDY+MA++PHFVV L+W ELLFQWPLL LNLYAFL++K WY TTCLIY
Subjt:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY

Query:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
        GVSLV+SMSA +GE+VGSNRASNTL+TIY+PF+GLGVLA LRGLV CSSKA I G RPSNGRKKRA
Subjt:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA

A0A6J1JIQ0 sigma intracellular receptor 2-like

1.3e-80

95.78

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Query:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
        MGALLKLVD LLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLK WYVAQSGDYLM EAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAW+ TTCLIY
Subjt:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY

Query:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
        GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLA LRGLVPCSSKA INGPRPSNGRKKRA
Subjt:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA

SwissProt top hits

e value

%identity

Alignment

Q6DFQ5 Sigma intracellular receptor 2

5.2e-07

25.32

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Query:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKA-WYKTTCLI
        M    +L++ + F  F     +  L+D Q V P S YP  ++DL +WY     D+LMA  P +    ++ E + Q P   +  YAF      W +   ++
Subjt:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKA-WYKTTCLI

Query:  YGVSLVSSMSATMGEVVG------------SNRASNTLLTIYWPFMGLGVLATL
        Y   + +++ A +G ++             + +   TL++IY P++ + VL  L
Subjt:  YGVSLVSSMSATMGEVVG------------SNRASNTLLTIYWPFMGLGVLATL

Arabidopsis top hits

e value

%identity

Alignment

AT1G05210.1 Transmembrane protein 97, predicted

1.0e-42

56.67

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Query:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
        MGAL KL+DV LF+ F+ +A++ PLID Q   P   YP F+ DLK  Y+A  GDYL+ E PHF+VGL+W ELLF WPL   N+YA L+ K+W+ TTCL+Y
Subjt:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY

Query:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSK
        G SLV+SM+A +G+++GS +AS+ LL +Y PFMG G+LA LRGLV  S+K
Subjt:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSK

AT1G05220.1 Transmembrane protein 97, predicted

1.2e-35

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Query:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
        MGAL KL+++ LF  F L+A+ VPL++ Q +FP   YP  + DLK WY ++  DYL  E P F VGL+W E++F  PL  +N+YA L+SK+W+ TT L+Y
Subjt:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY

Query:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSK
        G S ++SM+A +G+++GS + +N LL  Y PF+GL +LA LRGLV CS+K
Subjt:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSK

AT1G05220.2 Transmembrane protein 97, predicted

1.2e-35

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Query:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
        MGAL KL+++ LF  F L+A+ VPL++ Q +FP   YP  + DLK WY ++  DYL  E P F VGL+W E++F  PL  +N+YA L+SK+W+ TT L+Y
Subjt:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY

Query:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSK
        G S ++SM+A +G+++GS + +N LL  Y PF+GL +LA LRGLV CS+K
Subjt:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSK

AT2G32380.1 Transmembrane protein 97, predicted

8.0e-43

52.38

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Query:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY
        MGA  KL+D +LFL F L+AV+ PLID Q   P   +P F++DL RWY+ + GDYL+ E PHF+VGL+W ELL  WPL  +N+YA L+ K+W+ TT ++Y
Subjt:  MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIY

Query:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKA-PINGPRPS-NGRKKRA
        G S+V+SM+A +GE++GS +AS  LL +Y PFMG+G+LA LRGL+  S+K+    G RP+   R+KRA
Subjt:  GVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKA-PINGPRPS-NGRKKRA

Sequences

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CDS sequence

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ATGGGCGCTCTTCTCAAGCTCGTTGACGTTCTACTGTTCCTCGCCTTTCTCCTACTTGCAGTTGTAGTGCCTTTAATCGATTTCCAGGAGGTATTCCCTAAAAGCTTTTA
TCCTGATTTTGTAATCGATCTCAAGAGATGGTACGTCGCCCAATCGGGGGATTATTTAATGGCCGAGGCTCCTCATTTCGTCGTTGGCCTTATTTGGTTCGAGCTTCTTT
TTCAATGGCCTCTCTTGTTTCTCAATCTCTATGCCTTCTTGAGCTCCAAGGCTTGGTACAAGACCACTTGCTTGATCTATGGCGTTTCTCTCGTGTCTTCCATGTCTGCT
ACGATGGGTGAAGTGGTTGGATCAAACCGGGCGTCTAATACTCTGTTGACAATCTACTGGCCCTTCATGGGTTTGGGGGTGTTGGCCACGCTACGCGGGCTCGTGCCATG
CTCGAGCAAGGCTCCGATCAACGGACCCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGA

mRNA sequence

Show/hide mRNA sequence

AAATTGAGCAGCCCAGCCCAAGATCCGATCAATTGCTCTGCTCAGAGACTCTGGGAAGAAAGCTCTGTGGAACCATGGGCGCTCTTCTCAAGCTCGTTGACGTTCTACTG
TTCCTCGCCTTTCTCCTACTTGCAGTTGTAGTGCCTTTAATCGATTTCCAGGAGGTATTCCCTAAAAGCTTTTATCCTGATTTTGTAATCGATCTCAAGAGATGGTACGT
CGCCCAATCGGGGGATTATTTAATGGCCGAGGCTCCTCATTTCGTCGTTGGCCTTATTTGGTTCGAGCTTCTTTTTCAATGGCCTCTCTTGTTTCTCAATCTCTATGCCT
TCTTGAGCTCCAAGGCTTGGTACAAGACCACTTGCTTGATCTATGGCGTTTCTCTCGTGTCTTCCATGTCTGCTACGATGGGTGAAGTGGTTGGATCAAACCGGGCGTCT
AATACTCTGTTGACAATCTACTGGCCCTTCATGGGTTTGGGGGTGTTGGCCACGCTACGCGGGCTCGTGCCATGCTCGAGCAAGGCTCCGATCAACGGACCCAGACCATC
AAATGGCAGGAAAAAGAGGGCTTGAAGTGCCATCCTAGATCGCCAATGGTCTGTCCCGACTGAGCGTATCACATTGTCGGACTGAGGATGTTGGTTCTTTAGGTAATGGT
GCAACTCTCTCTTTTAACCTTCTAGTAGTCTTTCATTGTATGAGTGGTAGTGGTTCAATATTTGATCGTTTTAAGAATAAAATTGAGTTAAACCGAATCGAATTACATGA
ATGGTATTAATCCTTTTTTTAGCA

Protein sequence

Show/hide protein sequence

MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSA
TMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA

Carg19075 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome