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Carg19077 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19077
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMelanoma inhibitory activity protein 3, putative
Genome locationCarg_Chr11:12247985..12248772
RNA-Seq ExpressionCarg19077
SyntenyCarg19077
Gene Ontology termsGO:0010089 - xylem development (biological process)
InterPro domainsIPR039280 - VASCULAR-RELATED UNKNOWN PROTEIN


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589172.1 Vascular-related unknown protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-62100Show/hide
Query:  MDKKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
        MDKKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
Subjt:  MDKKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ

Query:  TAFDDDSLEDTATSPVLTPKVADLNV
        TAFDDDSLEDTATSPVLTPKVADLNV
Subjt:  TAFDDDSLEDTATSPVLTPKVADLNV

XP_022136166.1 uncharacterized protein LOC111007924 [Momordica charantia]3.3e-1956.25Show/hide
Query:  KKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYL-WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSP-FCSVGEVILDAPNKL-SFKK-TT
        +KN  A  ++ P   ++++  G  E  ESGWT+YLEDY   S+IER+ SFL CSS GSCS D         N LSP  CSVGEV LD+P KL  FKK T 
Subjt:  KKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYL-WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSP-FCSVGEVILDAPNKL-SFKK-TT

Query:  TQTAFDDDSLEDTATSPVLTPKVADLNV
        TQ  F DDSLEDTATSPV +PKVADL V
Subjt:  TQTAFDDDSLEDTATSPVLTPKVADLNV

XP_022930798.1 vascular-related unknown protein 1-like [Cucurbita moschata]1.8e-6097.62Show/hide
Query:  MDKKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
        MDKKNAAAAGVD PPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
Subjt:  MDKKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ

Query:  TAFDDDSLEDTATSPVLTPKVADLNV
          FDDDSLEDTATSPVLTPKVADLNV
Subjt:  TAFDDDSLEDTATSPVLTPKVADLNV

XP_022989009.1 vascular-related unknown protein 1-like [Cucurbita maxima]8.4e-5591.27Show/hide
Query:  MDKKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
        MDKKN   AGVD PPEKSSSAATGAEE  ESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKIN L+PFCSVGEVILDAPNKLS KKTTTQ
Subjt:  MDKKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ

Query:  TAFDDDSLEDTATSPVLTPKVADLNV
        T FDDDSLEDTATSPVLTPKVAD NV
Subjt:  TAFDDDSLEDTATSPVLTPKVADLNV

XP_038888852.1 vascular-related unknown protein 1-like [Benincasa hispida]1.7e-2356.06Show/hide
Query:  MDKKNAAAAGVDLPPEKSS-----SAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCS-WDISEANKEKINGLSPFCSVGEVILDAPNKLSF
        M+K NA A G D PPE SS     +AA GAEE  ESGWT+YLEDY  SE    SS+L CSS GSCS WD + +N      ++    +G++I D PNKL+F
Subjt:  MDKKNAAAAGVDLPPEKSS-----SAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCS-WDISEANKEKINGLSPFCSVGEVILDAPNKLSF

Query:  KKTTTQTAFDDDSLEDTATSPVLTPKVADLNV
        KKT TQ  F+DDSL+DTATSP+ +PKVADL V
Subjt:  KKTTTQTAFDDDSLEDTATSPVLTPKVADLNV

TrEMBL top hitse value%identityAlignment
A0A0A0K3L1 Uncharacterized protein7.0e-1552.89Show/hide
Query:  DLPPEKSSSAATGAEEPSESGWTEYLEDYLWSE-IERKSSFLCCSSSGSCS-WDISEANKEKINGLSPFCSVGEVILD---APNKLSFKKTTTQTAF-DD
        D  PE SS  A   EE  ESGWT+YLEDY  SE +ER+SSFL CSS GSCS WD           ++   ++G V  D     N L+FKKT TQ  F DD
Subjt:  DLPPEKSSSAATGAEEPSESGWTEYLEDYLWSE-IERKSSFLCCSSSGSCS-WDISEANKEKINGLSPFCSVGEVILD---APNKLSFKKTTTQTAF-DD

Query:  DSLEDTATSPVLTPKVADLNV
        DSL+DTATSP+ +PKV DL V
Subjt:  DSLEDTATSPVLTPKVADLNV

A0A1S3C0F7 uncharacterized protein LOC1034955856.8e-1853.44Show/hide
Query:  DKKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYLWSE-IERKSSFLCCSSSGSCS-WDISEANKEKINGLSPFCSVGEVILD---APNKLSFKK
        +  NA     D PPE SS+A  GAEE  ESGWT+YLEDY  SE +ER+SSFL CSS GSCS WD           ++   +VG V  D     N L+FKK
Subjt:  DKKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYLWSE-IERKSSFLCCSSSGSCS-WDISEANKEKINGLSPFCSVGEVILD---APNKLSFKK

Query:  TTTQTAF-DDDSLEDTATSPVLTPKVADLNV
        T TQ  F DDDSL+DTATSP+ +PKV DL V
Subjt:  TTTQTAF-DDDSLEDTATSPVLTPKVADLNV

A0A6J1C2S1 uncharacterized protein LOC1110079241.6e-1956.25Show/hide
Query:  KKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYL-WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSP-FCSVGEVILDAPNKL-SFKK-TT
        +KN  A  ++ P   ++++  G  E  ESGWT+YLEDY   S+IER+ SFL CSS GSCS D         N LSP  CSVGEV LD+P KL  FKK T 
Subjt:  KKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYL-WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSP-FCSVGEVILDAPNKL-SFKK-TT

Query:  TQTAFDDDSLEDTATSPVLTPKVADLNV
        TQ  F DDSLEDTATSPV +PKVADL V
Subjt:  TQTAFDDDSLEDTATSPVLTPKVADLNV

A0A6J1ESI7 Uncharacterized protein8.5e-6197.62Show/hide
Query:  MDKKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
        MDKKNAAAAGVD PPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
Subjt:  MDKKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ

Query:  TAFDDDSLEDTATSPVLTPKVADLNV
          FDDDSLEDTATSPVLTPKVADLNV
Subjt:  TAFDDDSLEDTATSPVLTPKVADLNV

A0A6J1JN61 Uncharacterized protein4.1e-5591.27Show/hide
Query:  MDKKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
        MDKKN   AGVD PPEKSSSAATGAEE  ESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKIN L+PFCSVGEVILDAPNKLS KKTTTQ
Subjt:  MDKKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ

Query:  TAFDDDSLEDTATSPVLTPKVADLNV
        T FDDDSLEDTATSPVLTPKVAD NV
Subjt:  TAFDDDSLEDTATSPVLTPKVADLNV

SwissProt top hitse value%identityAlignment
Q9LSZ3 Vascular-related unknown protein 14.9e-0534.26Show/hide
Query:  GAEEPSESGWTEYLEDYL---------WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQTAFDDDSLEDTATS
        G +   ESGWT YL+D+           ++ + KSS+   ++S S    +S+A     +G S         ++ P KL F +  T+   +DDSLEDTA+S
Subjt:  GAEEPSESGWTEYLEDYL---------WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQTAFDDDSLEDTATS

Query:  PVLTPKVA
        PV +PKV+
Subjt:  PVLTPKVA

Arabidopsis top hitse value%identityAlignment
AT3G21710.1 unknown protein3.5e-0634.26Show/hide
Query:  GAEEPSESGWTEYLEDYL---------WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQTAFDDDSLEDTATS
        G +   ESGWT YL+D+           ++ + KSS+   ++S S    +S+A     +G S         ++ P KL F +  T+   +DDSLEDTA+S
Subjt:  GAEEPSESGWTEYLEDYL---------WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQTAFDDDSLEDTATS

Query:  PVLTPKVA
        PV +PKV+
Subjt:  PVLTPKVA

AT3G21710.2 unknown protein3.5e-0634.26Show/hide
Query:  GAEEPSESGWTEYLEDYL---------WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQTAFDDDSLEDTATS
        G +   ESGWT YL+D+           ++ + KSS+   ++S S    +S+A     +G S         ++ P KL F +  T+   +DDSLEDTA+S
Subjt:  GAEEPSESGWTEYLEDYL---------WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQTAFDDDSLEDTATS

Query:  PVLTPKVA
        PV +PKV+
Subjt:  PVLTPKVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGAAGAACGCCGCTGCAGCCGGTGTTGATCTGCCGCCGGAGAAATCCTCCTCCGCCGCCACAGGAGCTGAAGAACCGTCGGAGAGTGGGTGGACGGAGTATCT
AGAGGATTATTTGTGGTCGGAAATTGAGAGAAAAAGCAGTTTTTTGTGTTGTTCAAGTAGTGGGAGCTGTAGTTGGGACATTTCAGAAGCCAACAAGGAAAAAATCAATG
GTTTAAGCCCATTTTGTAGCGTTGGGGAGGTGATTTTGGATGCCCCAAACAAGCTAAGCTTCAAAAAAACAACAACTCAGACGGCCTTTGACGATGATTCCTTAGAAGAT
ACGGCCACTTCTCCTGTTCTAACTCCAAAAGTTGCTGATTTGAACGTATGA
mRNA sequenceShow/hide mRNA sequence
TTGAATGGACAAGAAGAACGCCGCTGCAGCCGGTGTTGATCTGCCGCCGGAGAAATCCTCCTCCGCCGCCACAGGAGCTGAAGAACCGTCGGAGAGTGGGTGGACGGAGT
ATCTAGAGGATTATTTGTGGTCGGAAATTGAGAGAAAAAGCAGTTTTTTGTGTTGTTCAAGTAGTGGGAGCTGTAGTTGGGACATTTCAGAAGCCAACAAGGAAAAAATC
AATGGTTTAAGCCCATTTTGTAGCGTTGGGGAGGTGATTTTGGATGCCCCAAACAAGCTAAGCTTCAAAAAAACAACAACTCAGACGGCCTTTGACGATGATTCCTTAGA
AGATACGGCCACTTCTCCTGTTCTAACTCCAAAAGTTGCTGATTTGAACGTATGAACAACCCATCTAAATCCTAGGATTGATGAACATGTCGTGATCGGTAACTCCACGG
GCACCAATGGCCATCGGGGAATTATGATTCAAACCCAGAAAAAGCTGCAGAGAAGCAAAGGAAAAAAGGGCTGTGTTTGAGTCCAATTTACATGTAATTTTAGCTCTCAA
ACTCGCTATTATAATCTATAATTCTCTCGTTTCGTT
Protein sequenceShow/hide protein sequence
MDKKNAAAAGVDLPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQTAFDDDSLED
TATSPVLTPKVADLNV