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Carg19083 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19083
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionB box-type domain-containing protein
Genome locationCarg_Chr11:12291085..12291486
RNA-Seq ExpressionCarg19083
SyntenyCarg19083
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572307.1 B-box domain protein 30, partial [Cucurbita argyrosperma subsp. sororia]6.2e-4065.94Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGV QEE  Q  V++RR T+   A GGGG+P  CELCGSRAS+YCQADEAYLC KCDK VH ANFLA RHVRCLLC+TCQ  T+RYLLGAS  ME++L
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIV-RSLVERNYRNYPCHPRDFEDN----LVTRCLFL
        PSIV  SL+ERN++NY C   D++ N    L T CLFL
Subjt:  PSIV-RSLVERNYRNYPCHPRDFEDN----LVTRCLFL

KAG6589180.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia]2.1e-72100Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPCHPRDFEDNLVTRCLFL
        PSIVRSLVERNYRNYPCHPRDFEDNLVTRCLFL
Subjt:  PSIVRSLVERNYRNYPCHPRDFEDNLVTRCLFL

KGN43541.1 hypothetical protein Csa_020490 [Cucumis sativus]2.3e-4270.07Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQEE  Q AV QRR TD    A GGG+PV CELCGSRAS+YC+ADEAYLCGKCDKSVH ANFLA RHVRCLLC+TCQSHTQRYLLGASME+ +L 
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPCHPRDFEDN----LVTRCLFL
        PS+V    ERN+ NY C    F  N    L T CLFL
Subjt:  PSIVRSLVERNYRNYPCHPRDFEDN----LVTRCLFL

XP_022989503.1 B-box domain protein 30-like [Cucurbita maxima]6.1e-6495.24Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQEEPPQ AVEQRRRTDK TA GGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCS CQSH+QRYLLG SMEMEILL
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPCHPRDFEDNL
        PSIVRSLVERNYRNYPCHPRDFEDNL
Subjt:  PSIVRSLVERNYRNYPCHPRDFEDNL

XP_023530332.1 B-box domain protein 30-like [Cucurbita pepo subsp. pepo]2.2e-6996.24Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQE PPQPAVE+RRR DKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVH ANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPCHPRDFEDNLVTRCLFL
        PSIVR LVERNYRNYPCHPRDFEDNLVTRCLFL
Subjt:  PSIVRSLVERNYRNYPCHPRDFEDNLVTRCLFL

TrEMBL top hitse value%identityAlignment
A0A0A0K6V9 B box-type domain-containing protein1.1e-4270.07Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQEE  Q AV QRR TD    A GGG+PV CELCGSRAS+YC+ADEAYLCGKCDKSVH ANFLA RHVRCLLC+TCQSHTQRYLLGASME+ +L 
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPCHPRDFEDN----LVTRCLFL
        PS+V    ERN+ NY C    F  N    L T CLFL
Subjt:  PSIVRSLVERNYRNYPCHPRDFEDN----LVTRCLFL

A0A1S3C0U6 B-box zinc finger protein 211.5e-3967.88Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQEE   P V QR  TD   A   GG+PV CELCGSRAS+YC+ADEAYLCGKCDKSVH ANFLA RHVRCLLC+TCQSHTQRYLLGAS  ME+++
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPCHPRDFEDN----LVTRCLFL
        PSIV    ERN+ NY C    F  N    L T CLFL
Subjt:  PSIVRSLVERNYRNYPCHPRDFEDN----LVTRCLFL

A0A5A7TAC0 B-box zinc finger protein 211.5e-3967.88Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQEE   P V QR  TD   A   GG+PV CELCGSRAS+YC+ADEAYLCGKCDKSVH ANFLA RHVRCLLC+TCQSHTQRYLLGAS  ME+++
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPCHPRDFEDN----LVTRCLFL
        PSIV    ERN+ NY C    F  N    L T CLFL
Subjt:  PSIVRSLVERNYRNYPCHPRDFEDN----LVTRCLFL

A0A6J1GNE7 B-box domain protein 309.3e-3468.14Show/hide
Query:  AAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILLPSIV-RSLVERNYRNYPCHPRDFED
        A GGGG+P  CELCGSRAS+YCQADEAYLC KCDK VH ANFLA RHVRCLLC+TCQ  T+RYLLGAS  ME++LPSIV  S +ERN++NY C   D++ 
Subjt:  AAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILLPSIV-RSLVERNYRNYPCHPRDFED

Query:  N----LVTRCLFL
        N    L T CLFL
Subjt:  N----LVTRCLFL

A0A6J1JQG3 B-box domain protein 30-like3.0e-6495.24Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQEEPPQ AVEQRRRTDK TA GGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCS CQSH+QRYLLG SMEMEILL
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPCHPRDFEDNL
        PSIVRSLVERNYRNYPCHPRDFEDNL
Subjt:  PSIVRSLVERNYRNYPCHPRDFEDNL

SwissProt top hitse value%identityAlignment
O22800 Zinc finger protein CONSTANS-LIKE 142.9e-0853.06Show/hide
Query:  VACELCGSR-ASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTC
        VACE CG R A ++C+AD A LC  CD+ VH AN L+++HVR  +C  C
Subjt:  VACELCGSR-ASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTC

Q1G3I2 B-box domain protein 309.0e-1843.93Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTD----KTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEM
        MC+G E+EE         RR+D    +         PV+CELCG  A++YC+AD A+LC KCD+ VH ANFLA+RH+R ++C+TC+  T+R L+G +   
Subjt:  MCKGVEQEEPPQPAVEQRRRTD----KTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEM

Query:  EILLPSI
         ++LP I
Subjt:  EILLPSI

Q96502 Zinc finger protein CONSTANS-LIKE 22.2e-0847.46Show/hide
Query:  ACELCGSRA-SMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGA
        AC+ C S A ++YC+AD AYLC  CD  VH AN +A RH R  +C +C+S    +L  A
Subjt:  ACELCGSRA-SMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGA

Q9LJB7 B-box zinc finger protein 326.3e-1148.21Show/hide
Query:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLG
        CELCG+ A ++C AD A+LC  CD   H +NFL  RH R ++C  C+S TQ ++ G
Subjt:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLG

Q9LRM4 B-box domain protein 316.9e-1845.95Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGG--------GEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGA
        MC+G+  EE         RR+D     GGG          PV CELC   AS++C+AD A+LC KCD+ VHGANFLA RHVR +LC++CQ  T+R L+G 
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGG--------GEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGA

Query:  SMEMEILLPSI
          +  ++LPS+
Subjt:  SMEMEILLPSI

Arabidopsis top hitse value%identityAlignment
AT3G21150.1 B-box 324.5e-1248.21Show/hide
Query:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLG
        CELCG+ A ++C AD A+LC  CD   H +NFL  RH R ++C  C+S TQ ++ G
Subjt:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLG

AT3G21890.1 B-box type zinc finger family protein4.9e-1945.95Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGG--------GEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGA
        MC+G+  EE         RR+D     GGG          PV CELC   AS++C+AD A+LC KCD+ VHGANFLA RHVR +LC++CQ  T+R L+G 
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGG--------GEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGA

Query:  SMEMEILLPSI
          +  ++LPS+
Subjt:  SMEMEILLPSI

AT4G15248.1 B-box type zinc finger family protein6.4e-1943.93Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTD----KTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEM
        MC+G E+EE         RR+D    +         PV+CELCG  A++YC+AD A+LC KCD+ VH ANFLA+RH+R ++C+TC+  T+R L+G +   
Subjt:  MCKGVEQEEPPQPAVEQRRRTD----KTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEM

Query:  EILLPSI
         ++LP I
Subjt:  EILLPSI

AT4G27310.1 B-box type zinc finger family protein6.2e-1462Show/hide
Query:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHT
        C+LC   A MYC++D+A LC  CD  VHGANFL  +H RCLLCS CQS T
Subjt:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHT

AT5G54470.1 B-box type zinc finger family protein1.1e-1549.37Show/hide
Query:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILLPSIVRSLVERNYRN
        CELC   A MYC++D+A LC  CD  VHGANFL  +H+RCLLCS CQSHT     G ++   +   SI  S + R   N
Subjt:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILLPSIVRSLVERNYRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAAAGGAGTAGAGCAAGAAGAACCACCCCAACCCGCCGTCGAGCAGCGGCGGAGAACCGACAAGACGACGGCGGCGGGCGGGGGAGGCGAGCCAGTGGCGTGCGA
GCTCTGCGGTTCGAGGGCGTCGATGTACTGCCAAGCCGACGAAGCGTACTTGTGCGGAAAGTGCGACAAGTCGGTTCATGGCGCTAATTTCTTAGCGCAGCGGCACGTGC
GGTGCCTTCTGTGCAGCACGTGCCAGAGCCATACGCAGAGATATCTGTTGGGAGCTTCCATGGAAATGGAGATCCTGCTTCCTAGTATTGTGAGAAGTTTGGTGGAGAGG
AATTACCGAAATTATCCCTGTCATCCACGTGATTTTGAGGACAATTTGGTAACTCGTTGCCTGTTTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAAAGGAGTAGAGCAAGAAGAACCACCCCAACCCGCCGTCGAGCAGCGGCGGAGAACCGACAAGACGACGGCGGCGGGCGGGGGAGGCGAGCCAGTGGCGTGCGA
GCTCTGCGGTTCGAGGGCGTCGATGTACTGCCAAGCCGACGAAGCGTACTTGTGCGGAAAGTGCGACAAGTCGGTTCATGGCGCTAATTTCTTAGCGCAGCGGCACGTGC
GGTGCCTTCTGTGCAGCACGTGCCAGAGCCATACGCAGAGATATCTGTTGGGAGCTTCCATGGAAATGGAGATCCTGCTTCCTAGTATTGTGAGAAGTTTGGTGGAGAGG
AATTACCGAAATTATCCCTGTCATCCACGTGATTTTGAGGACAATTTGGTAACTCGTTGCCTGTTTCTTTGA
Protein sequenceShow/hide protein sequence
MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILLPSIVRSLVER
NYRNYPCHPRDFEDNLVTRCLFL