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Carg19097 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19097
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor MYB102-like
Genome locationCarg_Chr11:12345430..12345768
RNA-Seq ExpressionCarg19097
SyntenyCarg19097
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589192.1 putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. sororia]2.7e-5299.09Show/hide
Query:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTPLNSSSTCINNSSNEDERDSFCSNFLQF
        MDTLSQLLQPNEEFNNNTNSSMI ITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTPLNSSSTCINNSSNEDERDSFCSNFLQF
Subjt:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTPLNSSSTCINNSSNEDERDSFCSNFLQF

Query:  EIPEGLDFND
        EIPEGLDFND
Subjt:  EIPEGLDFND

KAG7022894.1 hypothetical protein SDJN02_16630, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-54100Show/hide
Query:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTPLNSSSTCINNSSNEDERDSFCSNFLQF
        MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTPLNSSSTCINNSSNEDERDSFCSNFLQF
Subjt:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTPLNSSSTCINNSSNEDERDSFCSNFLQF

Query:  EIPEGLDFNDLM
        EIPEGLDFNDLM
Subjt:  EIPEGLDFNDLM

XP_022930698.1 transcription factor MYB102-like [Cucurbita moschata]2.7e-5297.32Show/hide
Query:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTPLNSSSTCINNSSNEDERDSFCSNFLQF
        MDTLSQLLQPNEEFNNNTNSSMI ITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVI+TPKSSPTPLNSSSTCINNSS+EDERDSFCSNFLQF
Subjt:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTPLNSSSTCINNSSNEDERDSFCSNFLQF

Query:  EIPEGLDFNDLM
        EIPEGLDFNDLM
Subjt:  EIPEGLDFNDLM

XP_022989033.1 transcription factor MYB41-like [Cucurbita maxima]2.1e-3372.03Show/hide
Query:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTP------LNSSSTCINNSSNEDERDSFC
        MDTLSQLLQPNEEFNNNTNSSMI ITNFVE SNSQE+MNFLA NLSGDD L+   +D+  +   + PK+S  P       NSSSTC+NNSSNEDERDSFC
Subjt:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTP------LNSSSTCINNSSNEDERDSFC

Query:  SNFLQFEIPEGLDFNDLM
        SNFLQFEIP+GLDF+D M
Subjt:  SNFLQFEIPEGLDFNDLM

XP_023531401.1 transcription factor MYB41-like [Cucurbita pepo subsp. pepo]3.9e-4383.19Show/hide
Query:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSG-------DDGLIPMASDLGFESVITTPKSSPTPLNSSSTCINNSSNEDERDSF
        MDTLSQLLQPN+E NNNTNSSMI ITNFVE SNSQE+MNFLA NLSG       DDGL P ASD GFESVITTPKSSPTPLNSSSTCINNS NEDERDSF
Subjt:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSG-------DDGLIPMASDLGFESVITTPKSSPTPLNSSSTCINNSSNEDERDSF

Query:  CSNFLQFEIPEGLDFNDLM
        CSNFLQFEIP+GLDF D M
Subjt:  CSNFLQFEIPEGLDFNDLM

TrEMBL top hitse value%identityAlignment
A0A5A7SQ60 Transcription factor MYB394.0e-2255Show/hide
Query:  MDTLSQLLQPNEEFNNNTNSSMISITN-FVEYSN-SQEHMNFLAPNLS--------------GDDGLIPMASD-----------LGFESVITTPKSSPTP
        MD+LSQLLQPN+  NN  +SS++ I++ FV+ SN SQE++NFL  NL+              G DG  P AS+           LGF+SV    KSSPTP
Subjt:  MDTLSQLLQPNEEFNNNTNSSMISITN-FVEYSN-SQEHMNFLAPNLS--------------GDDGLIPMASD-----------LGFESVITTPKSSPTP

Query:  LNSSSTCINN-SSNEDERDSFCSNFLQFEIPEGLDFNDLM
        LNSSST +NN SSNEDE+DSFCSNFLQFEIPEGLDF D +
Subjt:  LNSSSTCINN-SSNEDERDSFCSNFLQFEIPEGLDFNDLM

A0A6J1EW33 transcription factor MYB102-like1.3e-5297.32Show/hide
Query:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTPLNSSSTCINNSSNEDERDSFCSNFLQF
        MDTLSQLLQPNEEFNNNTNSSMI ITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVI+TPKSSPTPLNSSSTCINNSS+EDERDSFCSNFLQF
Subjt:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTPLNSSSTCINNSSNEDERDSFCSNFLQF

Query:  EIPEGLDFNDLM
        EIPEGLDFNDLM
Subjt:  EIPEGLDFNDLM

A0A6J1GMR8 transcription factor MYB411.3e-2859.85Show/hide
Query:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLI-------------PMASD-----------LGFESVITTPKSSPTPLNS
        MDTLSQLLQPN+   N+ N+S + I+ F E+  SQE++NFL  NLSG D L+             P ASD           LGF+ VI+TPKSSPTPLNS
Subjt:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLI-------------PMASD-----------LGFESVITTPKSSPTPLNS

Query:  SSTCINN-SSNEDERDSFCSNFLQFEIPEGLDFNDLM
        SSTC+NN SSNEDERDS+CSNFLQFEIPEGLDF DLM
Subjt:  SSTCINN-SSNEDERDSFCSNFLQFEIPEGLDFNDLM

A0A6J1I1S0 transcription factor MYB41-like1.2e-2960.58Show/hide
Query:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLI-------------PMAS-----------DLGFESVITTPKSSPTPLNS
        MDTLSQLLQPN+   NN N+S + I+ FVE  NSQE++NFL  NLSG+D L+             P AS           +LGF+ VI+TPKSSPTPLNS
Subjt:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLI-------------PMAS-----------DLGFESVITTPKSSPTPLNS

Query:  SSTCINN-SSNEDERDSFCSNFLQFEIPEGLDFNDLM
        SSTC+NN SSNEDERDS+CSNF QFEIPEGLDF DLM
Subjt:  SSTCINN-SSNEDERDSFCSNFLQFEIPEGLDFNDLM

A0A6J1JP23 transcription factor MYB41-like1.0e-3372.03Show/hide
Query:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTP------LNSSSTCINNSSNEDERDSFC
        MDTLSQLLQPNEEFNNNTNSSMI ITNFVE SNSQE+MNFLA NLSGDD L+   +D+  +   + PK+S  P       NSSSTC+NNSSNEDERDSFC
Subjt:  MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTP------LNSSSTCINNSSNEDERDSFC

Query:  SNFLQFEIPEGLDFNDLM
        SNFLQFEIP+GLDF+D M
Subjt:  SNFLQFEIPEGLDFNDLM

SwissProt top hitse value%identityAlignment
Q9LDR8 Transcription factor MYB1025.1e-0648.44Show/hide
Query:  LIPMASDLGF---ESVITTPKSSPTPLNSSSTCINNS--SNEDERDSFCSNFLQFEIPEGLDFN
        L P  SD  F    SV+ TP SSP+P   +S+ IN+S  S EDE +S+CSN ++F+IP+ LD N
Subjt:  LIPMASDLGF---ESVITTPKSSPTPLNSSSTCINNS--SNEDERDSFCSNFLQFEIPEGLDFN

Arabidopsis top hitse value%identityAlignment
AT4G05100.1 myb domain protein 741.7e-0441.3Show/hide
Query:  SITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTPLN-SSSTCINNS--SNEDERDSFCSN-----------FLQFE
        ++ N + Y +     NF+         L P  SD  F SV+TTP SSPTPLN SSST IN+S  S EDE++S+ S+           FLQF+
Subjt:  SITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTPLN-SSSTCINNS--SNEDERDSFCSN-----------FLQFE

AT4G21440.1 MYB-like 1023.6e-0748.44Show/hide
Query:  LIPMASDLGF---ESVITTPKSSPTPLNSSSTCINNS--SNEDERDSFCSNFLQFEIPEGLDFN
        L P  SD  F    SV+ TP SSP+P   +S+ IN+S  S EDE +S+CSN ++F+IP+ LD N
Subjt:  LIPMASDLGF---ESVITTPKSSPTPLNSSSTCINNS--SNEDERDSFCSNFLQFEIPEGLDFN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACATTATCACAACTCTTACAGCCCAACGAGGAATTCAATAATAACACAAACTCTTCAATGATATCCATCACAAACTTCGTTGAGTACTCAAATTCTCAAGAACA
TATGAATTTCTTAGCTCCAAATTTGAGTGGTGATGATGGCTTGATACCTATGGCTTCAGATTTAGGGTTTGAATCGGTTATAACAACGCCAAAATCAAGCCCCACGCCGT
TGAATTCTTCATCTACTTGCATAAACAACAGCAGCAATGAGGATGAGAGAGACAGTTTTTGTAGTAACTTTTTGCAGTTTGAAATTCCTGAAGGCTTGGACTTTAATGAT
CTCATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACACATTATCACAACTCTTACAGCCCAACGAGGAATTCAATAATAACACAAACTCTTCAATGATATCCATCACAAACTTCGTTGAGTACTCAAATTCTCAAGAACA
TATGAATTTCTTAGCTCCAAATTTGAGTGGTGATGATGGCTTGATACCTATGGCTTCAGATTTAGGGTTTGAATCGGTTATAACAACGCCAAAATCAAGCCCCACGCCGT
TGAATTCTTCATCTACTTGCATAAACAACAGCAGCAATGAGGATGAGAGAGACAGTTTTTGTAGTAACTTTTTGCAGTTTGAAATTCCTGAAGGCTTGGACTTTAATGAT
CTCATGTAA
Protein sequenceShow/hide protein sequence
MDTLSQLLQPNEEFNNNTNSSMISITNFVEYSNSQEHMNFLAPNLSGDDGLIPMASDLGFESVITTPKSSPTPLNSSSTCINNSSNEDERDSFCSNFLQFEIPEGLDFND
LM