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Carg19107 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19107
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSerine/arginine repetitive matrix protein 1-like
Genome locationCarg_Chr11:12400662..12401330
RNA-Seq ExpressionCarg19107
SyntenyCarg19107
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589204.1 hypothetical protein SDJN03_17769, partial [Cucurbita argyrosperma subsp. sororia]1.3e-11499.55Show/hide
Query:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSK
        MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSE SQVTEWCSNMSESVSMATTISEQREGDEASSK
Subjt:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSK

Query:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
        QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
Subjt:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA

Query:  GIQPPNESIENPLVSLECFIFL
        GIQPPNESIENPLVSLECFIFL
Subjt:  GIQPPNESIENPLVSLECFIFL

KAG7022904.1 hypothetical protein SDJN02_16640, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-115100Show/hide
Query:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSK
        MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSK
Subjt:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSK

Query:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
        QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
Subjt:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA

Query:  GIQPPNESIENPLVSLECFIFL
        GIQPPNESIENPLVSLECFIFL
Subjt:  GIQPPNESIENPLVSLECFIFL

XP_022930792.1 uncharacterized protein LOC111437167 [Cucurbita moschata]1.5e-11092.05Show/hide
Query:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSK
        MRSPLPGSIDTRVENIPGNGTLEDETVKEV LDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSE SQVTEWCSNMSESVSMATTISEQREGDEASSK
Subjt:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSK

Query:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
        QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
Subjt:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA

Query:  G-----------------IQPPNESIENPLVSLECFIFL
        G                 IQPPNESIENPLVSLECFIFL
Subjt:  G-----------------IQPPNESIENPLVSLECFIFL

XP_022988923.1 uncharacterized protein LOC111486133 [Cucurbita maxima]6.8e-10889.96Show/hide
Query:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSK
        MRSPLPGSIDT VENIPGNGTLEDETVKEVLL+TPISKPCDLQKPVPKFEEDKSP +EE GVPSVSE SQVTEWCSNMSESVSMATTISEQREGD+ASSK
Subjt:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSK

Query:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
        QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
Subjt:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA

Query:  -----------------GIQPPNESIENPLVSLECFIFL
                         GIQPPNESIENPLVSLECFIFL
Subjt:  -----------------GIQPPNESIENPLVSLECFIFL

XP_023531016.1 uncharacterized protein LOC111793398 [Cucurbita pepo subsp. pepo]7.6e-7596.2Show/hide
Query:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSK
        MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSES+SMATTISEQREGDEASSK
Subjt:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSK

Query:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHE
        QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCR+TQGR ESREARTRKKLS   E
Subjt:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHE

TrEMBL top hitse value%identityAlignment
A0A5D3C531 Serine/arginine repetitive matrix protein 1-like3.1e-5858.21Show/hide
Query:  RSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVE---------EGGVPSVSEISQVTEWCSNMSESVSMATTISEQR
        + P PG  DT VEN+P N T E+ETVKEVL +TPI+KPC +++  PK   ++  +           E  + SVSE SQVTEWCSNMSESVSMATTISEQR
Subjt:  RSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVE---------EGGVPSVSEISQVTEWCSNMSESVSMATTISEQR

Query:  EGDEASSKQSREIGRNTTPKIRRKRPYSGDPSCRREQR----------------CRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAAR
        EGDEASSK SREIGRN  PKIRRKRP SGD S RREQR                 RV+CR + G TESREARTRK     HEQQSGV HGRRSRSP AAR
Subjt:  EGDEASSKQSREIGRNTTPKIRRKRPYSGDPSCRREQR----------------CRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAAR

Query:  TVGGTNKMGGNVKSSAMKGSGRA----------------------AGIQPPNESIENPLVSLECFIFL
        TV  TNK  GN+KSS MK +G+A                        IQPPNESIENPLVSLECFIFL
Subjt:  TVGGTNKMGGNVKSSAMKGSGRA----------------------AGIQPPNESIENPLVSLECFIFL

A0A6J1ERM6 uncharacterized protein LOC1114371677.1e-11192.05Show/hide
Query:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSK
        MRSPLPGSIDTRVENIPGNGTLEDETVKEV LDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSE SQVTEWCSNMSESVSMATTISEQREGDEASSK
Subjt:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSK

Query:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
        QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
Subjt:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA

Query:  G-----------------IQPPNESIENPLVSLECFIFL
        G                 IQPPNESIENPLVSLECFIFL
Subjt:  G-----------------IQPPNESIENPLVSLECFIFL

A0A6J1GNG7 uncharacterized protein LOC1114555162.5e-6360.37Show/hide
Query:  RSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEED----KSPEVE------EGGVPSVSEISQVTEWCSNMSESVSMATTISEQ
        ++P PG   T V NIPG GT E+ETVKEVL +TPI+KPC++Q+  PK +      KS E++      E G  SVSE+SQVTEWCSNMSESVSMATTISEQ
Subjt:  RSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEED----KSPEVE------EGGVPSVSEISQVTEWCSNMSESVSMATTISEQ

Query:  REGDEASSKQSREIGRNTTPKIRRKRPYSGDPSCRREQR----------------CRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAA
        REGDEASSKQSRE+GRN  PKIRRKRPYSGDPS RREQR                 RV+CR T G TESREARTR KL+GG EQ+SGV HGRRSRSP A 
Subjt:  REGDEASSKQSREIGRNTTPKIRRKRPYSGDPSCRREQR----------------CRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAA

Query:  RTVGGTNKMGGNVKSSAMKGSGRA-----------------------AGIQPPNESIENPLVSLECFIFL
        RTV  TNK  GN+KSSA+K +G+A                       +  QPPNESIENPLVSLECFIFL
Subjt:  RTVGGTNKMGGNVKSSAMKGSGRA-----------------------AGIQPPNESIENPLVSLECFIFL

A0A6J1HYF2 uncharacterized protein LOC1114680628.5e-6460.37Show/hide
Query:  RSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEED----KSPEVE------EGGVPSVSEISQVTEWCSNMSESVSMATTISEQ
        ++P PG   T V NIPG GT E+ETVKEVL +TPI+KPC++Q+  PK +      KS E++      E G  SVSE+SQVTEWCSNMSESVSMATTISEQ
Subjt:  RSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEED----KSPEVE------EGGVPSVSEISQVTEWCSNMSESVSMATTISEQ

Query:  REGDEASSKQSREIGRNTTPKIRRKRPYSGDPSCRREQR----------------CRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAA
        REGDEASSKQSRE+GRN  PKIRRKRPYSGDPS RR+QR                 RV+CR T G TESREARTR KL+GG EQ+SGV HGRRSRSP A 
Subjt:  REGDEASSKQSREIGRNTTPKIRRKRPYSGDPSCRREQR----------------CRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAA

Query:  RTVGGTNKMGGNVKSSAMKGSGRA-----------------------AGIQPPNESIENPLVSLECFIFL
        +TV  TNK  GN+KSSA+K +G+A                       A IQPPNESIENPLVSLECFIFL
Subjt:  RTVGGTNKMGGNVKSSAMKGSGRA-----------------------AGIQPPNESIENPLVSLECFIFL

A0A6J1JNR3 uncharacterized protein LOC1114861333.3e-10889.96Show/hide
Query:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSK
        MRSPLPGSIDT VENIPGNGTLEDETVKEVLL+TPISKPCDLQKPVPKFEEDKSP +EE GVPSVSE SQVTEWCSNMSESVSMATTISEQREGD+ASSK
Subjt:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSK

Query:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
        QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
Subjt:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA

Query:  -----------------GIQPPNESIENPLVSLECFIFL
                         GIQPPNESIENPLVSLECFIFL
Subjt:  -----------------GIQPPNESIENPLVSLECFIFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGTCCGTTACCGGGGTCCATCGACACCCGTGTCGAAAACATCCCCGGCAATGGAACCCTGGAAGACGAAACCGTCAAAGAAGTCCTCTTAGATACTCCCATTTC
CAAGCCATGTGACCTGCAAAAACCAGTCCCAAAGTTTGAAGAAGACAAGTCTCCTGAGGTGGAGGAAGGGGGTGTCCCTTCAGTTTCAGAGATATCTCAGGTTACGGAAT
GGTGCAGCAATATGAGCGAAAGCGTGTCAATGGCGACCACCATTTCAGAGCAACGAGAAGGCGACGAAGCCTCAAGTAAACAGAGCAGAGAAATTGGTCGGAATACAACA
CCAAAGATTCGCAGAAAGCGTCCATATTCCGGCGACCCATCATGTAGAAGAGAACAGAGGTGTCGTGTTAGTTGCAGGAACACACAGGGAAGGACAGAATCAAGAGAAGC
GAGGACCAGGAAGAAGCTGAGTGGAGGGCACGAGCAGCAATCTGGAGTCGGCCATGGGCGGCGTTCGAGGTCACCAGCTGCTGCTCGAACAGTTGGAGGCACGAACAAGA
TGGGGGGGAATGTGAAAAGCAGTGCCATGAAAGGGAGTGGACGAGCTGCTGGAATTCAGCCCCCAAATGAATCCATTGAAAACCCACTTGTCTCACTTGAATGTTTCATC
TTTCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGTCCGTTACCGGGGTCCATCGACACCCGTGTCGAAAACATCCCCGGCAATGGAACCCTGGAAGACGAAACCGTCAAAGAAGTCCTCTTAGATACTCCCATTTC
CAAGCCATGTGACCTGCAAAAACCAGTCCCAAAGTTTGAAGAAGACAAGTCTCCTGAGGTGGAGGAAGGGGGTGTCCCTTCAGTTTCAGAGATATCTCAGGTTACGGAAT
GGTGCAGCAATATGAGCGAAAGCGTGTCAATGGCGACCACCATTTCAGAGCAACGAGAAGGCGACGAAGCCTCAAGTAAACAGAGCAGAGAAATTGGTCGGAATACAACA
CCAAAGATTCGCAGAAAGCGTCCATATTCCGGCGACCCATCATGTAGAAGAGAACAGAGGTGTCGTGTTAGTTGCAGGAACACACAGGGAAGGACAGAATCAAGAGAAGC
GAGGACCAGGAAGAAGCTGAGTGGAGGGCACGAGCAGCAATCTGGAGTCGGCCATGGGCGGCGTTCGAGGTCACCAGCTGCTGCTCGAACAGTTGGAGGCACGAACAAGA
TGGGGGGGAATGTGAAAAGCAGTGCCATGAAAGGGAGTGGACGAGCTGCTGGAATTCAGCCCCCAAATGAATCCATTGAAAACCCACTTGTCTCACTTGAATGTTTCATC
TTTCTGTAG
Protein sequenceShow/hide protein sequence
MRSPLPGSIDTRVENIPGNGTLEDETVKEVLLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSEISQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTT
PKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAAGIQPPNESIENPLVSLECFI
FL