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Carg19151 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19151
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr11:12616104..12620303
RNA-Seq ExpressionCarg19151
SyntenyCarg19151
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589249.1 hypothetical protein SDJN03_17814, partial [Cucurbita argyrosperma subsp. sororia]4.6e-67100Show/hide
Query:  TCHLKVYLLALLKLISYLDSIYFFDVHYDRSKYDKNSRISLNEAHKLPSNYGLFYSIISRFVTSAGHVTHHDRHVTSLSVSYQNQLSLAEFNLKKGCEWG
        TCHLKVYLLALLKLISYLDSIYFFDVHYDRSKYDKNSRISLNEAHKLPSNYGLFYSIISRFVTSAGHVTHHDRHVTSLSVSYQNQLSLAEFNLKKGCEWG
Subjt:  TCHLKVYLLALLKLISYLDSIYFFDVHYDRSKYDKNSRISLNEAHKLPSNYGLFYSIISRFVTSAGHVTHHDRHVTSLSVSYQNQLSLAEFNLKKGCEWG

Query:  NGWRLIMPTCSPLHLTCAATLCTNDL
        NGWRLIMPTCSPLHLTCAATLCTNDL
Subjt:  NGWRLIMPTCSPLHLTCAATLCTNDL

KAG7022948.1 hypothetical protein SDJN02_16684, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-166100Show/hide
Query:  MAPHSPHNPVRFRSIRESSMARIRYTSSSSTRLLPDAIDAALLDEASLRTVRSNKGVVITSSFGWKSSRQTAHLLPSSSFSPLLLSFAIFCSSDVSVEFP
        MAPHSPHNPVRFRSIRESSMARIRYTSSSSTRLLPDAIDAALLDEASLRTVRSNKGVVITSSFGWKSSRQTAHLLPSSSFSPLLLSFAIFCSSDVSVEFP
Subjt:  MAPHSPHNPVRFRSIRESSMARIRYTSSSSTRLLPDAIDAALLDEASLRTVRSNKGVVITSSFGWKSSRQTAHLLPSSSFSPLLLSFAIFCSSDVSVEFP

Query:  SDLGVGLYSSAGLELASICLGLEWLSDYPTISNNLAIIAPPVGRHGIGSSSLVGRDGTGSIPPVGRDGIGFTCHLKVYLLALLKLISYLDSIYFFDVHYD
        SDLGVGLYSSAGLELASICLGLEWLSDYPTISNNLAIIAPPVGRHGIGSSSLVGRDGTGSIPPVGRDGIGFTCHLKVYLLALLKLISYLDSIYFFDVHYD
Subjt:  SDLGVGLYSSAGLELASICLGLEWLSDYPTISNNLAIIAPPVGRHGIGSSSLVGRDGTGSIPPVGRDGIGFTCHLKVYLLALLKLISYLDSIYFFDVHYD

Query:  RSKYDKNSRISLNEAHKLPSNYGLFYSIISRFVTSAGHVTHHDRHVTSLSVSYQNQLSLAEFNLKKGCEWGNGWRLIMPTCSPLHLTCAATLCTNDL
        RSKYDKNSRISLNEAHKLPSNYGLFYSIISRFVTSAGHVTHHDRHVTSLSVSYQNQLSLAEFNLKKGCEWGNGWRLIMPTCSPLHLTCAATLCTNDL
Subjt:  RSKYDKNSRISLNEAHKLPSNYGLFYSIISRFVTSAGHVTHHDRHVTSLSVSYQNQLSLAEFNLKKGCEWGNGWRLIMPTCSPLHLTCAATLCTNDL

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCTCATTCTCCCCACAATCCGGTCAGATTTCGCAGCATCAGAGAATCTTCCATGGCTCGTATTAGGTACACGAGCTCGTCGTCGACTAGGTTACTACCCGACGC
TATTGATGCAGCGTTGTTGGACGAAGCTTCTCTTCGCACTGTTCGTTCGAACAAGGGCGTCGTCATCACTTCCTCTTTCGGCTGGAAATCTTCAAGGCAAACGGCGCATC
TCTTGCCGTCTTCATCATTTTCACCGTTGCTCCTTTCATTCGCCATATTTTGTTCTTCAGATGTTAGCGTGGAGTTTCCTTCGGATCTTGGAGTTGGCCTGTACAGTTCT
GCCGGTCTTGAACTGGCCTCGATCTGCCTCGGTCTGGAGTGGTTATCTGATTACCCGACAATTTCTAACAATCTTGCAATCATTGCTCCCCCGGTTGGCCGCCATGGAAT
TGGATCTAGCTCCCTAGTAGGCCGAGATGGAACGGGATCTATCCCCCCAGTAGGCCGCGATGGAATTGGGTTTACCTGCCATTTGAAAGTTTATCTCTTAGCTTTGCTAA
AGCTAATTTCATATCTGGATAGTATTTATTTCTTCGACGTTCATTACGATCGATCTAAATATGACAAGAATTCTCGAATAAGTTTGAATGAAGCCCACAAGTTACCCTCA
AATTACGGGCTATTCTATTCTATTATATCGAGATTTGTGACCTCTGCTGGCCACGTGACCCATCATGACAGACATGTGACATCTCTATCGGTTTCGTATCAAAATCAGCT
TAGCTTAGCTGAATTCAATCTGAAAAAAGGCTGTGAATGGGGCAACGGGTGGCGCCTAATAATGCCCACTTGTAGCCCTCTACACCTAACTTGCGCAGCAACCCTCTGCA
CAAATGACCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCTCATTCTCCCCACAATCCGGTCAGATTTCGCAGCATCAGAGAATCTTCCATGGCTCGTATTAGGTACACGAGCTCGTCGTCGACTAGGTTACTACCCGACGC
TATTGATGCAGCGTTGTTGGACGAAGCTTCTCTTCGCACTGTTCGTTCGAACAAGGGCGTCGTCATCACTTCCTCTTTCGGCTGGAAATCTTCAAGGCAAACGGCGCATC
TCTTGCCGTCTTCATCATTTTCACCGTTGCTCCTTTCATTCGCCATATTTTGTTCTTCAGATGTTAGCGTGGAGTTTCCTTCGGATCTTGGAGTTGGCCTGTACAGTTCT
GCCGGTCTTGAACTGGCCTCGATCTGCCTCGGTCTGGAGTGGTTATCTGATTACCCGACAATTTCTAACAATCTTGCAATCATTGCTCCCCCGGTTGGCCGCCATGGAAT
TGGATCTAGCTCCCTAGTAGGCCGAGATGGAACGGGATCTATCCCCCCAGTAGGCCGCGATGGAATTGGGTTTACCTGCCATTTGAAAGTTTATCTCTTAGCTTTGCTAA
AGCTAATTTCATATCTGGATAGTATTTATTTCTTCGACGTTCATTACGATCGATCTAAATATGACAAGAATTCTCGAATAAGTTTGAATGAAGCCCACAAGTTACCCTCA
AATTACGGGCTATTCTATTCTATTATATCGAGATTTGTGACCTCTGCTGGCCACGTGACCCATCATGACAGACATGTGACATCTCTATCGGTTTCGTATCAAAATCAGCT
TAGCTTAGCTGAATTCAATCTGAAAAAAGGCTGTGAATGGGGCAACGGGTGGCGCCTAATAATGCCCACTTGTAGCCCTCTACACCTAACTTGCGCAGCAACCCTCTGCA
CAAATGACCTGTAAGTCCTCCTGCCTCTTTTTAGCTTTATATTTTTACCTATAAAATTAATTATTACCAAAAAAAACCCTAAAATTTCATTAATTATT
Protein sequenceShow/hide protein sequence
MAPHSPHNPVRFRSIRESSMARIRYTSSSSTRLLPDAIDAALLDEASLRTVRSNKGVVITSSFGWKSSRQTAHLLPSSSFSPLLLSFAIFCSSDVSVEFPSDLGVGLYSS
AGLELASICLGLEWLSDYPTISNNLAIIAPPVGRHGIGSSSLVGRDGTGSIPPVGRDGIGFTCHLKVYLLALLKLISYLDSIYFFDVHYDRSKYDKNSRISLNEAHKLPS
NYGLFYSIISRFVTSAGHVTHHDRHVTSLSVSYQNQLSLAEFNLKKGCEWGNGWRLIMPTCSPLHLTCAATLCTNDL