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Carg19177 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19177
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr19:8227306..8227560
RNA-Seq ExpressionCarg19177
SyntenyCarg19177
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572302.1 hypothetical protein SDJN03_29030, partial [Cucurbita argyrosperma subsp. sororia]5.6e-39100Show/hide
Query:  MEKNAGADGVDPPLEDSSAGAQQQEQSGWTDYLVDYSSPENAVCSSTGSCSWDPNSVGKAVFEDDDDALEDTATSPIHSTKVST
        MEKNAGADGVDPPLEDSSAGAQQQEQSGWTDYLVDYSSPENAVCSSTGSCSWDPNSVGKAVFEDDDDALEDTATSPIHSTKVST
Subjt:  MEKNAGADGVDPPLEDSSAGAQQQEQSGWTDYLVDYSSPENAVCSSTGSCSWDPNSVGKAVFEDDDDALEDTATSPIHSTKVST

KAG7011915.1 hypothetical protein SDJN02_26823, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-39100Show/hide
Query:  MEKNAGADGVDPPLEDSSAGAQQQEQSGWTDYLVDYSSPENAVCSSTGSCSWDPNSVGKAVFEDDDDALEDTATSPIHSTKVST
        MEKNAGADGVDPPLEDSSAGAQQQEQSGWTDYLVDYSSPENAVCSSTGSCSWDPNSVGKAVFEDDDDALEDTATSPIHSTKVST
Subjt:  MEKNAGADGVDPPLEDSSAGAQQQEQSGWTDYLVDYSSPENAVCSSTGSCSWDPNSVGKAVFEDDDDALEDTATSPIHSTKVST

XP_008455422.1 PREDICTED: uncharacterized protein LOC103495585 [Cucumis melo]5.2e-0842.34Show/hide
Query:  PPLEDSSAGAQQQEQSGWTDYLVDYSSPE------NAVCSSTGSCS-WD-------PN-------SVGKAVFED-------------------DDDALED
        PP   S+AGA++QE+SGWTDYL DY + E      + +CSS GSCS WD       PN       +VG   ++D                   DDD+L+D
Subjt:  PPLEDSSAGAQQQEQSGWTDYLVDYSSPE------NAVCSSTGSCS-WD-------PN-------SVGKAVFED-------------------DDDALED

Query:  TATSPIHSTKV
        TATSPIHS KV
Subjt:  TATSPIHSTKV

XP_022930798.1 vascular-related unknown protein 1-like [Cucurbita moschata]8.8e-0840Show/hide
Query:  EKNAGADGVDPPLEDSSA---GAQQQEQSGWTDYLVDYSSPE------NAVCSSTGSCSWDPN--------------SVGKAVFED--------------
        +KNA A GVDPP E SS+   GA++  +SGWT+YL DY   E         CSS+GSCSWD +              SVG+ + +               
Subjt:  EKNAGADGVDPPLEDSSA---GAQQQEQSGWTDYLVDYSSPE------NAVCSSTGSCSWDPN--------------SVGKAVFED--------------

Query:  -DDDALEDTATSPIHSTKVS
         DDD+LEDTATSP+ + KV+
Subjt:  -DDDALEDTATSPIHSTKVS

XP_038888852.1 vascular-related unknown protein 1-like [Benincasa hispida]8.5e-1145.45Show/hide
Query:  MEK-NAGADGVDPPLEDSS--------AGAQQQEQSGWTDYLVDYSSPENA-VCSSTGSCS-WD------------PNSVGKAVFE--------------
        MEK NA A+G D P E+SS        AGA++QE+SGWTDYL DY S E++ +CSS GSCS WD             N +GK +F+              
Subjt:  MEK-NAGADGVDPPLEDSS--------AGAQQQEQSGWTDYLVDYSSPENA-VCSSTGSCS-WD------------PNSVGKAVFE--------------

Query:  -DDDDALEDTATSPIHSTKVS
          +DD+L+DTATSPIHS KV+
Subjt:  -DDDDALEDTATSPIHSTKVS

TrEMBL top hitse value%identityAlignment
A0A0A0K3L1 Uncharacterized protein5.7e-0536.36Show/hide
Query:  PLEDSSAGAQQQEQSGWTDYLVDYSSPE------NAVCSSTGSCS-WDPN--------------SVGKAVFED-------------------DDDALEDT
        P   S+   ++QE+SGWTDYL DY + E      + +CSS GSCS WD                ++G   ++D                   DDD+L+DT
Subjt:  PLEDSSAGAQQQEQSGWTDYLVDYSSPE------NAVCSSTGSCS-WDPN--------------SVGKAVFED-------------------DDDALEDT

Query:  ATSPIHSTKV
        ATSPIHS KV
Subjt:  ATSPIHSTKV

A0A1S3C0F7 uncharacterized protein LOC1034955852.5e-0842.34Show/hide
Query:  PPLEDSSAGAQQQEQSGWTDYLVDYSSPE------NAVCSSTGSCS-WD-------PN-------SVGKAVFED-------------------DDDALED
        PP   S+AGA++QE+SGWTDYL DY + E      + +CSS GSCS WD       PN       +VG   ++D                   DDD+L+D
Subjt:  PPLEDSSAGAQQQEQSGWTDYLVDYSSPE------NAVCSSTGSCS-WD-------PN-------SVGKAVFED-------------------DDDALED

Query:  TATSPIHSTKV
        TATSPIHS KV
Subjt:  TATSPIHSTKV

A0A6J1C2S1 uncharacterized protein LOC1110079248.0e-0739.52Show/hide
Query:  MEKNAGADGVDPPLEDSSA-------GAQQQEQSGWTDYLVDYSS------PENAVCSSTGSCSWDPN-----------SVGKAVFED------------
        MEKN  A    PPLE+ SA       G  ++E+SGWTDYL DY S       ++ +CSS GSCS D N           SVG+   +             
Subjt:  MEKNAGADGVDPPLEDSSA-------GAQQQEQSGWTDYLVDYSS------PENAVCSSTGSCSWDPN-----------SVGKAVFED------------

Query:  -----DDDALEDTATSPIHSTKVS
              DD+LEDTATSP+HS KV+
Subjt:  -----DDDALEDTATSPIHSTKVS

A0A6J1ESI7 Uncharacterized protein4.3e-0840Show/hide
Query:  EKNAGADGVDPPLEDSSA---GAQQQEQSGWTDYLVDYSSPE------NAVCSSTGSCSWDPN--------------SVGKAVFED--------------
        +KNA A GVDPP E SS+   GA++  +SGWT+YL DY   E         CSS+GSCSWD +              SVG+ + +               
Subjt:  EKNAGADGVDPPLEDSSA---GAQQQEQSGWTDYLVDYSSPE------NAVCSSTGSCSWDPN--------------SVGKAVFED--------------

Query:  -DDDALEDTATSPIHSTKVS
         DDD+LEDTATSP+ + KV+
Subjt:  -DDDALEDTATSPIHSTKVS

A0A6J1JN61 Uncharacterized protein4.7e-0740Show/hide
Query:  EKNAGADGVDPPLEDSSA---GAQQQEQSGWTDYLVDYSSPE------NAVCSSTGSCSWDPN--------------SVGKAVFED--------------
        +KNA   GVDPP E SS+   GA++ E+SGWT+YL DY   E         CSS+GSCSWD +              SVG+ + +               
Subjt:  EKNAGADGVDPPLEDSSA---GAQQQEQSGWTDYLVDYSSPE------NAVCSSTGSCSWDPN--------------SVGKAVFED--------------

Query:  -DDDALEDTATSPIHSTKVS
         DDD+LEDTATSP+ + KV+
Subjt:  -DDDALEDTATSPIHSTKVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAACGCCGGCGCTGACGGTGTTGATCCCCCGCTGGAAGATTCCTCCGCCGGAGCTCAACAGCAAGAACAGAGTGGTTGGACTGATTACTTGGTGGATTATTC
CTCGCCGGAAAATGCTGTATGTTCGAGCACTGGGAGCTGTTCTTGGGATCCCAATTCTGTTGGGAAAGCGGTTTTTGAGGATGATGATGATGCCTTAGAAGACACGGCTA
CTTCTCCTATTCACAGTACAAAAGTCAGCACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAACGCCGGCGCTGACGGTGTTGATCCCCCGCTGGAAGATTCCTCCGCCGGAGCTCAACAGCAAGAACAGAGTGGTTGGACTGATTACTTGGTGGATTATTC
CTCGCCGGAAAATGCTGTATGTTCGAGCACTGGGAGCTGTTCTTGGGATCCCAATTCTGTTGGGAAAGCGGTTTTTGAGGATGATGATGATGCCTTAGAAGACACGGCTA
CTTCTCCTATTCACAGTACAAAAGTCAGCACATAA
Protein sequenceShow/hide protein sequence
MEKNAGADGVDPPLEDSSAGAQQQEQSGWTDYLVDYSSPENAVCSSTGSCSWDPNSVGKAVFEDDDDALEDTATSPIHSTKVST