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Carg19194 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19194
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLEA_2 domain-containing protein
Genome locationCarg_Chr19:8292045..8294435
RNA-Seq ExpressionCarg19194
SyntenyCarg19194
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595030.1 hypothetical protein SDJN03_11583, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2087.3Show/hide
Query:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGT
        + I FDKFVIQAGADFS VATDLA MNATVKF+FRNTA+FFGVHVTSTPL+LSYSQLTLASGT
Subjt:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGT

KAG6600176.1 hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2173.08Show/hide
Query:  SQLTLASGTPRDKPDIKIYVLAEESRTMNSYVSEICSSNREGKNNAVALDEVIAWTTEKQLVLSLRPVGFSHLLGILM
        S ++     P D PDI+IYVLAEESRT NSYV E CS NREGKN AV LDEVIAW TEKQ VLSLR VGFSHLLGIL+
Subjt:  SQLTLASGTPRDKPDIKIYVLAEESRTMNSYVSEICSSNREGKNNAVALDEVIAWTTEKQLVLSLRPVGFSHLLGILM

KAG7011932.1 hypothetical protein SDJN02_26840, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-86100Show/hide
Query:  MESSPHSHSVFCWQGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGTPRDKPDIKIYVLAEESRTMNSYVS
        MESSPHSHSVFCWQGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGTPRDKPDIKIYVLAEESRTMNSYVS
Subjt:  MESSPHSHSVFCWQGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGTPRDKPDIKIYVLAEESRTMNSYVS

Query:  EICSSNREGKNNAVALDEVIAWTTEKQLVLSLRPVGFSHLLGILMEVENMDGDNKDEGILQGSSE
        EICSSNREGKNNAVALDEVIAWTTEKQLVLSLRPVGFSHLLGILMEVENMDGDNKDEGILQGSSE
Subjt:  EICSSNREGKNNAVALDEVIAWTTEKQLVLSLRPVGFSHLLGILMEVENMDGDNKDEGILQGSSE

KAG7027054.1 hypothetical protein SDJN02_11063, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-2087.3Show/hide
Query:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGT
        + I FDKFVIQAGADFS VATDLA MNATVKF+FRNTA+FFGVHVTSTPL+LSYSQLTLASGT
Subjt:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGT

KAG7030840.1 hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2172.5Show/hide
Query:  SQLTLASGTPRDKPDIKIYVLAEESRTMNSYVSEICSSNREGKNNAVALDEVIAWTTEKQLVLSLRPVGFSHLLGILMEV
        S ++     P D PDI+IYVLAEESRT NSYV E CS NREGKN AV LDEVIAW TEKQ VLSLR VGFSHLLGIL+ V
Subjt:  SQLTLASGTPRDKPDIKIYVLAEESRTMNSYVSEICSSNREGKNNAVALDEVIAWTTEKQLVLSLRPVGFSHLLGILMEV

TrEMBL top hitse value%identityAlignment
A0A0A0KJK1 LEA_2 domain-containing protein1.1e-1884.13Show/hide
Query:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGT
        + I FDKFVIQAGADFS VAT L  MNATVKFIFRNTA+FFGV VTSTPL+LSYSQLTLASGT
Subjt:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGT

A0A5D3CN58 Late embryogenesis abundant protein, LEA-145.6e-2069.14Show/hide
Query:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGTPRDKPDIKIYVLAEESRT
        + I FDKFVIQAGADFS VAT L  MNATVKFIFRNTA+FFGV VTSTPL+LSYSQLTLASGT     ++K+Y ++ E ++
Subjt:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGTPRDKPDIKIYVLAEESRT

A0A6J1BTU7 uncharacterized protein LOC1110056326.2e-1980.3Show/hide
Query:  VFCWQGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASG
        V   + I FDKFVIQAGADFS VATDL  MNATVKFIFRNTA+FF VHVTSTPL++SYSQLTLASG
Subjt:  VFCWQGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASG

A0A6J1HE75 uncharacterized protein LOC1114631788.6e-2187.3Show/hide
Query:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGT
        + I FDKFVIQAGADFS VATDLA MNATVKF+FRNTA+FFGVHVTSTPL+LSYSQLTLASGT
Subjt:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGT

A0A6J1KNI5 uncharacterized protein LOC1114972488.6e-2187.3Show/hide
Query:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGT
        + I FDKFVIQAGADFS VATDLA MNATVKF+FRNTA+FFGVHVTSTPL+LSYSQLTLASGT
Subjt:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G45688.1 unknown protein2.9e-1344.19Show/hide
Query:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGTPRDKPDIKIYVLAEESRTMNSYV
        + I F+   IQAG D   V TD+  MNAT++ ++RNT +FFGVHVTSTP+ LS+SQ+ + SG+ +     K Y   +  RT+  +V
Subjt:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGTPRDKPDIKIYVLAEESRTMNSYV

AT1G45688.2 unknown protein5.9e-1448.15Show/hide
Query:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGTPRDKPDIKIYVLAEESRT
        + I F+   IQAG D   V TD+  MNAT++ ++RNT +FFGVHVTSTP+ LS+SQ+ + SG+    P  K+Y + EE  T
Subjt:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGTPRDKPDIKIYVLAEESRT

AT2G41990.1 CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864)8.8e-1046.77Show/hide
Query:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASG
        +G+      +QAG D S V TD+  +N+TV+  +RN ++FF VHVT++PL L YS L L+SG
Subjt:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASG

AT4G35170.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family1.2e-1160.38Show/hide
Query:  IQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASG
        +Q+G D S V TD+  +N+TV+ ++RN A+FF VHVTS PL+LSYSQL LASG
Subjt:  IQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASG

AT5G42860.1 unknown protein1.7e-1342.68Show/hide
Query:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGTPRDKPDIKIYVLAEESRTM
        + I F++  +QAG D   + TD+  MNAT++ ++RNT +FFGVHVTS+P+ LS+SQ+T+ SG+ +     K Y   +  RT+
Subjt:  QGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGTPRDKPDIKIYVLAEESRTM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCCTCCCCTCACTCGCACTCTGTTTTCTGTTGGCAGGGCATTTTCTTCGACAAGTTCGTGATCCAAGCGGGGGCGGATTTTTCAGAAGTGGCGACTGATCTGGC
GATGATGAATGCGACGGTGAAGTTCATATTTCGAAATACGGCCTCGTTTTTCGGCGTTCATGTCACTTCCACTCCGCTTCGGCTTTCGTATTCTCAGCTCACACTTGCCT
CTGGAACTCCAAGGGACAAACCTGATATTAAAATTTATGTGTTGGCAGAAGAGAGCAGGACGATGAACTCTTATGTCAGTGAGATCTGTTCCAGTAACAGAGAGGGGAAG
AACAATGCAGTTGCTCTTGATGAAGTGATTGCTTGGACAACAGAAAAGCAGTTGGTCTTGTCATTGAGGCCGGTTGGATTTTCGCATCTGCTAGGAATACTGATGGAGGT
GGAGAACATGGATGGAGATAATAAAGATGAGGGCATTCTACAAGGTAGTTCGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCCTCCCCTCACTCGCACTCTGTTTTCTGTTGGCAGGGCATTTTCTTCGACAAGTTCGTGATCCAAGCGGGGGCGGATTTTTCAGAAGTGGCGACTGATCTGGC
GATGATGAATGCGACGGTGAAGTTCATATTTCGAAATACGGCCTCGTTTTTCGGCGTTCATGTCACTTCCACTCCGCTTCGGCTTTCGTATTCTCAGCTCACACTTGCCT
CTGGAACTCCAAGGGACAAACCTGATATTAAAATTTATGTGTTGGCAGAAGAGAGCAGGACGATGAACTCTTATGTCAGTGAGATCTGTTCCAGTAACAGAGAGGGGAAG
AACAATGCAGTTGCTCTTGATGAAGTGATTGCTTGGACAACAGAAAAGCAGTTGGTCTTGTCATTGAGGCCGGTTGGATTTTCGCATCTGCTAGGAATACTGATGGAGGT
GGAGAACATGGATGGAGATAATAAAGATGAGGGCATTCTACAAGGTAGTTCGGAATAG
Protein sequenceShow/hide protein sequence
MESSPHSHSVFCWQGIFFDKFVIQAGADFSEVATDLAMMNATVKFIFRNTASFFGVHVTSTPLRLSYSQLTLASGTPRDKPDIKIYVLAEESRTMNSYVSEICSSNREGK
NNAVALDEVIAWTTEKQLVLSLRPVGFSHLLGILMEVENMDGDNKDEGILQGSSE