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Carg19197 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19197
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionActin cytoskeleton-regulatory complex protein
Genome locationCarg_Chr19:8319307..8319612
RNA-Seq ExpressionCarg19197
SyntenyCarg19197
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031619.1 hypothetical protein E6C27_scaffold139G003870 [Cucumis melo var. makuwa]1.3e-2978.43Show/hide
Query:  MAKISLL-SLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDS
        MAK  LL  LI+A+ILLIQAM S ATTT   +SAAPEP+E    EG  +AEAPEIRRLGKHH DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVDS
Subjt:  MAKISLL-SLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDS

Query:  VH
        VH
Subjt:  VH

KAE8645753.1 hypothetical protein Csa_020263 [Cucumis sativus]1.7e-1871.43Show/hide
Query:  MAKISLL-SLILAQILLIQAM-ASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIR
        MAKI LL  LI+ +I LIQA+  S ATTT   +S APE SE    EG  +AEAPEIRRLGKHH DKS+AGGGVIIGGLVTAVFAAVFCYIR
Subjt:  MAKISLL-SLILAQILLIQAM-ASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIR

KAF7805845.1 Actin cytoskeleton-regulatory complex protein [Senna tora]1.5e-1766.67Show/hide
Query:  LLSLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHV-DKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKR
        ++ L+L QIL+++AMA T T   +H   A +P  +  V G G+AEAPEIRRLGKHH  DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKR
Subjt:  LLSLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHV-DKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKR

KAG6572323.1 hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia]2.7e-4399.01Show/hide
Query:  MAKISLLSLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSV
        MAKISLL LILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSV
Subjt:  MAKISLLSLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSV

Query:  H
        H
Subjt:  H

KAG7011935.1 hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-44100Show/hide
Query:  MAKISLLSLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSV
        MAKISLLSLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSV
Subjt:  MAKISLLSLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSV

Query:  H
        H
Subjt:  H

TrEMBL top hitse value%identityAlignment
A0A061E2I4 Uncharacterized protein7.9e-1756.64Show/hide
Query:  KISLLSLILAQILLIQAMASTATTTTSHVSA-----------------APEPSETDNVEGPGLAEAPEIRRLGKHHV-DKSVAGGGVIIGGLVTAVFAAV
        K+ L+SL+L +I L+QAMA  +    S + A                 A  P+E+ N E  G A+APEIRRLGKHH+ DKSVAGGGVIIGGLVTA+FAAV
Subjt:  KISLLSLILAQILLIQAMASTATTTTSHVSA-----------------APEPSETDNVEGPGLAEAPEIRRLGKHHV-DKSVAGGGVIIGGLVTAVFAAV

Query:  FCYIRVTRKRDGV
        F YIRVTRKRDGV
Subjt:  FCYIRVTRKRDGV

A0A0A0K3N0 Uncharacterized protein2.4e-2674.76Show/hide
Query:  MAKISLL-SLILAQILLIQAM-ASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVD
        MAKI LL  LI+ +I LIQA+  S ATTT   +S APE SE    EG  +AEAPEIRRLGKHH DKS+AGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVD
Subjt:  MAKISLL-SLILAQILLIQAM-ASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVD

Query:  SVH
        SVH
Subjt:  SVH

A0A5D3C590 Uncharacterized protein6.2e-3078.43Show/hide
Query:  MAKISLL-SLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDS
        MAK  LL  LI+A+ILLIQAM S ATTT   +SAAPEP+E    EG  +AEAPEIRRLGKHH DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVDS
Subjt:  MAKISLL-SLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDS

Query:  VH
        VH
Subjt:  VH

A5BAN6 Uncharacterized protein2.3e-1657.29Show/hide
Query:  MAKISLLSLILAQILLIQAMA--STATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKR
        M ++ L+ L+LA+IL++QA+A  S      S V  A +PS     E   +AEAP  RRLGKHHVD+S+AGGGVIIGGL TA+FAAVFCYIR+TR+R
Subjt:  MAKISLLSLILAQILLIQAMA--STATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKR

W9R8T9 Uncharacterized protein3.0e-1655.36Show/hide
Query:  MAKISLLSLILAQILLIQAMASTA---------TTTTSHVSAAPEPSETDNVEG------PGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVF
        MA+I LL LIL  IL+IQ +A+ +         +   S V+  P  S  +  EG         AEAP IRRLGKHH DKS+AGGGVIIGGLVTA+FAAVF
Subjt:  MAKISLLSLILAQILLIQAMASTA---------TTTTSHVSAAPEPSETDNVEG------PGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVF

Query:  CYIRVTRKRDGV
        CYIRVTRKR+ V
Subjt:  CYIRVTRKRDGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein2.5e-0741.05Show/hide
Query:  AKISLLSLILAQILLIQAMASTATTTTSHVSAAPE-PSETDNVEGPGLAEAPEIRRLGKHH--VDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRK
        AK  +L  +L  +  + A +S A    +      E P E    E P ++   E  R G HH  V++SVAGGGVI+GGL T     VFCYIR TRK
Subjt:  AKISLLSLILAQILLIQAMASTATTTTSHVSAAPE-PSETDNVEGPGLAEAPEIRRLGKHH--VDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAATTTCCCTTCTTTCCCTCATTCTGGCCCAGATCTTGCTGATTCAAGCAATGGCTTCGACTGCCACAACCACAACGAGCCATGTGTCGGCGGCCCCGGAGCC
ATCGGAGACCGACAACGTAGAAGGGCCTGGACTGGCGGAGGCGCCGGAGATCCGACGCCTGGGAAAGCATCACGTGGATAAGTCCGTGGCCGGCGGGGGAGTCATCATTG
GCGGCCTTGTTACGGCAGTTTTTGCAGCTGTTTTTTGTTACATTCGGGTTACTAGAAAAAGAGATGGAGTTGATTCGGTTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAAATTTCCCTTCTTTCCCTCATTCTGGCCCAGATCTTGCTGATTCAAGCAATGGCTTCGACTGCCACAACCACAACGAGCCATGTGTCGGCGGCCCCGGAGCC
ATCGGAGACCGACAACGTAGAAGGGCCTGGACTGGCGGAGGCGCCGGAGATCCGACGCCTGGGAAAGCATCACGTGGATAAGTCCGTGGCCGGCGGGGGAGTCATCATTG
GCGGCCTTGTTACGGCAGTTTTTGCAGCTGTTTTTTGTTACATTCGGGTTACTAGAAAAAGAGATGGAGTTGATTCGGTTCATTGA
Protein sequenceShow/hide protein sequence
MAKISLLSLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSVH