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Carg19258 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19258
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosomal protein L22p/L17e family protein isoform 1
Genome locationCarg_Chr03:9655535..9656227
RNA-Seq ExpressionCarg19258
SyntenyCarg19258
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR035204 - NADH-ubiquinone oxidoreductase 11kDa subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601597.1 hypothetical protein SDJN03_06830, partial [Cucurbita argyrosperma subsp. sororia]2.4e-27100Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHN
        MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHN
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHN
KAG7034709.1 hypothetical protein SDJN02_04439, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-46100Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRMFGRALKSVVVSGKLPSNCLNVYFVVV
        MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRMFGRALKSVVVSGKLPSNCLNVYFVVV
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRMFGRALKSVVVSGKLPSNCLNVYFVVV
XP_022151828.1 uncharacterized protein LOC111019716 [Momordica charantia]1.8e-2790.62Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
        MKF+MEFAENLV+RLMEDPKERDRKFREH+YAVKDRCQKTKEMWSYP+RPYGFWTFERHN QL+
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
XP_022956462.1 uncharacterized protein LOC111458190 [Cucurbita moschata]4.0e-30100Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
        MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
XP_038891434.1 uncharacterized protein LOC120080854 [Benincasa hispida]6.3e-2892.19Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
        MKF+MEFAENLVLRLMEDPKERDRKFREH+YAVKDRCQKTKEMWSYP+RPYGFWTFERHN QL+
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
TrEMBL top hitse value%identityAlignment
A0A2N9HET1 Uncharacterized protein2.6e-2792.19Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
        M FIMEFAENLVL+LMEDPKERDRKFREHVYAVKDRC KTKEMWSYP+RPYGFWTFERHN QLR
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
A0A5N6R2K3 Uncharacterized protein2.6e-2792.19Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
        M FIMEFAENLVLRLMEDPKERDRKFREH+YAVKDRC KTKEMWSYP+RPYGFWTFERHN QLR
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
A0A6J1DD92 uncharacterized protein LOC1110197168.9e-2890.62Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
        MKF+MEFAENLV+RLMEDPKERDRKFREH+YAVKDRCQKTKEMWSYP+RPYGFWTFERHN QL+
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
A0A6J1GWE2 uncharacterized protein LOC1114581901.9e-30100Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
        MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
A0A6J1K907 uncharacterized protein LOC1114933471.9e-30100Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
        MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67350.1 unknown protein1.1e-2578.12Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
        M FIMEFAENLVLRLME+P+ERDRK REH+Y + +RC+K KEMW+ PIRPYGFWTFERHN QLR
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
AT1G67350.2 unknown protein1.1e-2578.12Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR
        M FIMEFAENLVLRLME+P+ERDRK REH+Y + +RC+K KEMW+ PIRPYGFWTFERHN QLR
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCATCATGGAGTTTGCTGAGAATTTGGTACTAAGACTTATGGAGGATCCAAAAGAGAGGGATCGGAAGTTCCGAGAGCACGTGTACGCGGTGAAGGATCGATG
CCAAAAGACGAAGGAGATGTGGAGCTATCCAATCCGTCCTTACGGATTTTGGACATTTGAGCGCCACAATTGTCAGCTGCGGATGTTTGGTAGAGCTCTGAAATCTGTGG
TGGTATCTGGGAAGCTCCCAAGCAATTGTTTGAACGTTTATTTTGTTGTTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTCATCATGGAGTTTGCTGAGAATTTGGTACTAAGACTTATGGAGGATCCAAAAGAGAGGGATCGGAAGTTCCGAGAGCACGTGTACGCGGTGAAGGATCGATG
CCAAAAGACGAAGGAGATGTGGAGCTATCCAATCCGTCCTTACGGATTTTGGACATTTGAGCGCCACAATTGTCAGCTGCGGATGTTTGGTAGAGCTCTGAAATCTGTGG
TGGTATCTGGGAAGCTCCCAAGCAATTGTTTGAACGTTTATTTTGTTGTTGTTTAAACTCGAGAAGTACCTTGTGGTTTGTATTGTCAAACGGAGATTTTGGTGCTGGAA
TAAACGTGCTTTTTAGCTCATAAGATATATTTCAAGCTGGTGAATTTGAGTACATTGTTTTTCTAGTGCCCTGATCGGATGCATTTTTCATTATCTATATCCAAATTTGT
TGCAAACTATCATAGCTCCGC
Protein sequenceShow/hide protein sequence
MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRMFGRALKSVVVSGKLPSNCLNVYFVVV