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Carg19266 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19266
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPrefoldin subunit 6
Genome locationCarg_Chr03:9689270..9691490
RNA-Seq ExpressionCarg19266
SyntenyCarg19266
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0043622 - cortical microtubule organization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002777 - Prefoldin beta-like
IPR009053 - Prefoldin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9684167.1 hypothetical protein SADUNF_Sadunf04G0089500 [Salix dunnii]1.0e-0652.24Show/hide
Query:  EALRRITKQERSVIQSYVKTK-SALKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE
        E LRRI K  +S + S  +T  S+ +ELDLL +DA VYKL+G +LVKQDL+  N NVR R  Y++ E
Subjt:  EALRRITKQERSVIQSYVKTK-SALKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE

KAG7034717.1 hypothetical protein SDJN02_04447, partial [Cucurbita argyrosperma subsp. argyrosperma]9.0e-56100Show/hide
Query:  MPVLNWGDFGLVRSAVYKSLLYYLPRGTYIVPVVIVPTKEGEERSRSNEALRRITKQERSVIQSYVKTKSALKELDLLKEDATVYKLVGHILVKQDLSWP
        MPVLNWGDFGLVRSAVYKSLLYYLPRGTYIVPVVIVPTKEGEERSRSNEALRRITKQERSVIQSYVKTKSALKELDLLKEDATVYKLVGHILVKQDLSWP
Subjt:  MPVLNWGDFGLVRSAVYKSLLYYLPRGTYIVPVVIVPTKEGEERSRSNEALRRITKQERSVIQSYVKTKSALKELDLLKEDATVYKLVGHILVKQDLSWP

Query:  NENVRMRTGYLADE
        NENVRMRTGYLADE
Subjt:  NENVRMRTGYLADE

KAG9135344.1 hypothetical protein Leryth_007124 [Lithospermum erythrorhizon]8.5e-0641.25Show/hide
Query:  KEGEERSRSNEALRRITKQERSVIQSYV----KTKSALKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE
        +E E ++     L++ + +   + + Y     + +  LKELDLL EDA VYKL+G +LVKQDL+  N NVR R  Y++DE
Subjt:  KEGEERSRSNEALRRITKQERSVIQSYV----KTKSALKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE

KDP37967.1 hypothetical protein JCGZ_04610 [Jatropha curcas]1.9e-0567.44Show/hide
Query:  LKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE
        LKELDLLKEDA VYKL+G +LVKQDL+  N NVR R  Y++ E
Subjt:  LKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE

XP_007137462.1 hypothetical protein PHAVU_009G128800g [Phaseolus vulgaris]1.5e-0556.86Show/hide
Query:  SYVKTKSALKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE
        S+ + +  LKELDLL+EDA VYKL+G +LVKQDL+  N NVR R  Y++ E
Subjt:  SYVKTKSALKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE

TrEMBL top hitse value%identityAlignment
A0A067KPA0 Uncharacterized protein9.2e-0667.44Show/hide
Query:  LKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE
        LKELDLLKEDA VYKL+G +LVKQDL+  N NVR R  Y++ E
Subjt:  LKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE

A0A6J1KNW9 prefoldin subunit 6-like isoform X29.2e-0662.5Show/hide
Query:  KTKSALKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE
        ++K  L+ELDLLKED+ VYKL G ILV+QD + PN NVR R GYL  E
Subjt:  KTKSALKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE

A0A6J1KRG5 probable prefoldin subunit 6 isoform X19.2e-0662.5Show/hide
Query:  KTKSALKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE
        ++K  L+ELDLLKED+ VYKL G ILV+QD + PN NVR R GYL  E
Subjt:  KTKSALKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE

A0A7I8KKX4 Hypothetical protein9.2e-0667.44Show/hide
Query:  LKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE
        LKELDLLKEDA VYKL+G +LVKQDL+  N NVR R  Y++ E
Subjt:  LKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE

V7AYY6 Uncharacterized protein7.1e-0656.86Show/hide
Query:  SYVKTKSALKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE
        S+ + +  LKELDLL+EDA VYKL+G +LVKQDL+  N NVR R  Y++ E
Subjt:  SYVKTKSALKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE

SwissProt top hitse value%identityAlignment
Q9VW56 Probable prefoldin subunit 66.4e-0442.37Show/hide
Query:  QERSVIQSYV-KTKSALKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE
        ++R+V++S + + K  L EL+LL  D  VYKL G +LVKQ+L    +NV  R  Y++ E
Subjt:  QERSVIQSYV-KTKSALKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE

Arabidopsis top hitse value%identityAlignment
AT1G29990.1 prefoldin 66.7e-0965.12Show/hide
Query:  LKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE
        LKELDLL+EDA VYKL+G +LVKQDL+  N NVR R  Y++ E
Subjt:  LKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGYLADE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGTCTTGAATTGGGGCGATTTTGGGCTTGTGAGATCAGCGGTATATAAATCGCTACTGTACTATTTGCCGCGAGGGACGTATATCGTACCAGTTGTTATTGTTCC
GACTAAGGAAGGCGAAGAAAGAAGCCGAAGCAACGAAGCCTTGCGAAGAATTACTAAGCAAGAGCGAAGTGTGATACAGAGCTATGTGAAAACGAAGTCTGCTCTCAAGG
AATTGGATTTGCTGAAAGAGGATGCAACTGTTTACAAATTAGTTGGCCATATTCTTGTGAAGCAAGATCTATCATGGCCAAATGAAAATGTTCGGATGAGAACTGGTTAT
CTCGCTGATGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAGTCTTGAATTGGGGCGATTTTGGGCTTGTGAGATCAGCGGTATATAAATCGCTACTGTACTATTTGCCGCGAGGGACGTATATCGTACCAGTTGTTATTGTTCC
GACTAAGGAAGGCGAAGAAAGAAGCCGAAGCAACGAAGCCTTGCGAAGAATTACTAAGCAAGAGCGAAGTGTGATACAGAGCTATGTGAAAACGAAGTCTGCTCTCAAGG
AATTGGATTTGCTGAAAGAGGATGCAACTGTTTACAAATTAGTTGGCCATATTCTTGTGAAGCAAGATCTATCATGGCCAAATGAAAATGTTCGGATGAGAACTGGTTAT
CTCGCTGATGAATAGAAACGCGCTGGTGCAATTATCGAAGATTTGGAAGAGAAGCAAATGAGCAAAAGAGACAAGGTTAGCATTTATTTATCATGCATTTTAGATATAGG
ACATGCCTTCAGATCGAATACGACGATTTGCCCCGATTTTTATGAGTCGGTGATGAAATTTTCTGAACTCAAATTCTTGCATTACGAATGATGAAATTTTCTGAACTCAA
ATTCTTGCATTACGAAGTTCAAGTATTGATGATCACTTTATTATTTATTTTTATTTTTTTTGGACATAATAGTAATTTACGATTAGTGCTTTATCTTTTTCGTTGGTATA
TGACGATTTGCCCCGATTTTTATGGATCGTTGATGAAATTTTCTGAATTCAAATCCTTGCATTACGAGACGAGGTTCAAATATTGATGGTCACTTTGTTTTTATTTTTCT
TTTTTTTTTCTTTTTTTTTTTGAAAAAGG
Protein sequenceShow/hide protein sequence
MPVLNWGDFGLVRSAVYKSLLYYLPRGTYIVPVVIVPTKEGEERSRSNEALRRITKQERSVIQSYVKTKSALKELDLLKEDATVYKLVGHILVKQDLSWPNENVRMRTGY
LADE