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Carg19272 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19272
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionVQ domain-containing protein
Genome locationCarg_Chr03:9723821..9724120
RNA-Seq ExpressionCarg19272
SyntenyCarg19272
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039608 - VQ motif-containing protein 1/10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052539.1 VQ motif-containing protein 1-like [Cucumis melo var. makuwa]1.4e-2056.99Show/hide
Query:  VKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRVEVEKS-----YMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD
        V+VVLIEYHH+ TD S+FKSVVQ+LTGKHSS  E GG  CRKR RV    +      +N++   +H+ SFKDLDR L+L LP++EDL+WI  D
Subjt:  VKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRVEVEKS-----YMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD

KAG6581431.1 hypothetical protein SDJN03_21433, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4897.98Show/hide
Query:  MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRVEVEKSYMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD
        MADSKNTPAGGVKVVLIEYHHVHTDVS+FKSVVQTLTGKHSSAVEGGGGTC KRPRVEVEKSYMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD
Subjt:  MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRVEVEKSYMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD

KAG7034723.1 hypothetical protein SDJN02_04453, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-49100Show/hide
Query:  MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRVEVEKSYMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD
        MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRVEVEKSYMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD
Subjt:  MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRVEVEKSYMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD

KGN49401.1 hypothetical protein Csa_003856 [Cucumis sativus]1.2e-1954.72Show/hide
Query:  MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGG-TCRKRPRVEVEK------SYMNRTASFLHSTSFKDLDRFLNLHLPALEDL
        M +SK T    V+VVLIEYHH+ TD S+FKSVVQ+LTGKHS A E  GG  CRKR RV  +       + +N+    +H+ SFKDLDR L L LP++EDL
Subjt:  MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGG-TCRKRPRVEVEK------SYMNRTASFLHSTSFKDLDRFLNLHLPALEDL

Query:  NWIWAD
        NWI  D
Subjt:  NWIWAD

XP_038881537.1 VQ motif-containing protein 10-like [Benincasa hispida]1.1e-2557.66Show/hide
Query:  MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRVEVE--KSYMN----------RTASFLHSTSFKDLDRFLNLHLP
        M +SK T    V+VV+IEYHH+ TDVS+FKSVVQ+LTGKHSSAVEGGG +C+KR RV  E  +S +N           +   + +TSFKDLDR L+LHLP
Subjt:  MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRVEVE--KSYMN----------RTASFLHSTSFKDLDRFLNLHLP

Query:  ALEDLNWIWAD
        ++EDLNWIW D
Subjt:  ALEDLNWIWAD

TrEMBL top hitse value%identityAlignment
A0A0A0KNW8 VQ domain-containing protein5.7e-2054.72Show/hide
Query:  MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGG-TCRKRPRVEVEK------SYMNRTASFLHSTSFKDLDRFLNLHLPALEDL
        M +SK T    V+VVLIEYHH+ TD S+FKSVVQ+LTGKHS A E  GG  CRKR RV  +       + +N+    +H+ SFKDLDR L L LP++EDL
Subjt:  MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGG-TCRKRPRVEVEK------SYMNRTASFLHSTSFKDLDRFLNLHLPALEDL

Query:  NWIWAD
        NWI  D
Subjt:  NWIWAD

A0A5D3CN21 VQ motif-containing protein 1-like6.7e-2156.99Show/hide
Query:  VKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRVEVEKS-----YMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD
        V+VVLIEYHH+ TD S+FKSVVQ+LTGKHSS  E GG  CRKR RV    +      +N++   +H+ SFKDLDR L+L LP++EDL+WI  D
Subjt:  VKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRVEVEKS-----YMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD

A0A6J1CYB0 uncharacterized protein LOC1110157001.2e-1450.49Show/hide
Query:  VKVVLIEYHHVHTDVSSFKSVVQTLTG---KHSSAVEG---GGGTCRKRPRVEVEKSYMNR---------TASFLHSTSFKDLDRFLNLHLPALEDLNWI
        VKVVLIEYHHV TDVS+FKSVVQ+LTG   + SSA+       G   KR R +++ +  N+         T   LH+ SFKDLDR L  +LP+++DL+WI
Subjt:  VKVVLIEYHHVHTDVSSFKSVVQTLTG---KHSSAVEG---GGGTCRKRPRVEVEKSYMNR---------TASFLHSTSFKDLDRFLNLHLPALEDLNWI

Query:  WAD
        WAD
Subjt:  WAD

A0A6J1EF02 VQ motif-containing protein 10-like1.6e-1753.98Show/hide
Query:  MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRV-------------EVEKSYMNRTASFLHSTSFKDLD-RFLNLH
        MA+SK   AG VKVV IEYHH+ TDV++FKSVVQTLTG +S+A    GG  RK+ RV             E  +S    T S L STSF+DLD   L L 
Subjt:  MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRV-------------EVEKSYMNRTASFLHSTSFKDLD-RFLNLH

Query:  LPALEDLNWIWAD
        LP++EDLNWIWAD
Subjt:  LPALEDLNWIWAD

A0A6J1KT83 VQ motif-containing protein 103.1e-1854.87Show/hide
Query:  MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRV-------------EVEKSYMNRTASFLHSTSFKDLD-RFLNLH
        MA+SK   AG VKVV IEYHH+ TDVS+FKSVVQTLTG +S+A    GG  RK+PRV             E   S    T S + STSF+DLD   L L 
Subjt:  MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRV-------------EVEKSYMNRTASFLHSTSFKDLD-RFLNLH

Query:  LPALEDLNWIWAD
        LP++EDLNWIWAD
Subjt:  LPALEDLNWIWAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGACTCCAAGAACACGCCGGCAGGAGGAGTGAAGGTGGTGCTAATTGAGTACCACCATGTTCACACCGACGTCTCCAGCTTCAAATCCGTCGTTCAGACCCTCAC
CGGCAAGCATTCCTCCGCCGTCGAGGGCGGTGGAGGGACCTGCAGGAAGAGGCCGCGAGTGGAGGTTGAGAAAAGTTATATGAACCGGACGGCGTCGTTTCTGCACAGCA
CCTCGTTTAAGGACTTGGATCGCTTCCTCAACCTCCACCTCCCTGCCCTGGAGGATCTCAACTGGATTTGGGCCGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGACTCCAAGAACACGCCGGCAGGAGGAGTGAAGGTGGTGCTAATTGAGTACCACCATGTTCACACCGACGTCTCCAGCTTCAAATCCGTCGTTCAGACCCTCAC
CGGCAAGCATTCCTCCGCCGTCGAGGGCGGTGGAGGGACCTGCAGGAAGAGGCCGCGAGTGGAGGTTGAGAAAAGTTATATGAACCGGACGGCGTCGTTTCTGCACAGCA
CCTCGTTTAAGGACTTGGATCGCTTCCTCAACCTCCACCTCCCTGCCCTGGAGGATCTCAACTGGATTTGGGCCGACTGA
Protein sequenceShow/hide protein sequence
MADSKNTPAGGVKVVLIEYHHVHTDVSSFKSVVQTLTGKHSSAVEGGGGTCRKRPRVEVEKSYMNRTASFLHSTSFKDLDRFLNLHLPALEDLNWIWAD