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Carg19317 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19317
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr03:9998384..9999302
RNA-Seq ExpressionCarg19317
SyntenyCarg19317
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581475.1 hypothetical protein SDJN03_21477, partial [Cucurbita argyrosperma subsp. sororia]4.2e-62100Show/hide
Query:  MIIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATA
        MIIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATA
Subjt:  MIIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATA

Query:  ACGITGVTLLVGSTLFYIYKDGSLRSV
        ACGITGVTLLVGSTLFYIYKDGSLRSV
Subjt:  ACGITGVTLLVGSTLFYIYKDGSLRSV

XP_022925668.1 uncharacterized protein LOC111433017 [Cucurbita moschata]1.4e-5799.17Show/hide
Query:  MIIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATA
        MIIPIKPVAAM VFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATA
Subjt:  MIIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATA

Query:  ACGITGVTLLVGSTLFYIYK
        ACGITGVTLLVGSTLFYIYK
Subjt:  ACGITGVTLLVGSTLFYIYK

XP_023003567.1 uncharacterized protein LOC111497130 [Cucurbita maxima]2.5e-4678.57Show/hide
Query:  IIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATAA
        +I IK +AAMAV+L  IVA+ +ALEIRPSEHGLEFQSPP AG+KSSPEMRSFF GTSSP P+  LPLPKAMNSSEAPGWWTHRDGG+KR+RNALLVATAA
Subjt:  IIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKDGSLRSV
        CG+TGVTLLVGSTL+YI+K  + RS+
Subjt:  CGITGVTLLVGSTLFYIYKDGSLRSV

XP_023518243.1 uncharacterized protein LOC111781779 [Cucurbita pepo subsp. pepo]2.9e-4780.16Show/hide
Query:  IIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATAA
        +I IK +AAMAV+L  IVA+A+ALEIRPSEHGLEFQSPP AG+KSSPEMRSFF GTSSP P+  LPLPKAMNSSEAPGWWTHRDGG+KR+RNALLVATAA
Subjt:  IIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKDGSLRSV
        CGITGVTLLVGSTL+YI+K  + RS+
Subjt:  CGITGVTLLVGSTLFYIYKDGSLRSV

XP_023543933.1 uncharacterized protein LOC111803654 [Cucurbita pepo subsp. pepo]4.7e-5399.09Show/hide
Query:  MAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATAACGITGVTLL
        MAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSP+MRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATAACGITGVTLL
Subjt:  MAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATAACGITGVTLL

Query:  VGSTLFYIYK
        VGSTLFYIYK
Subjt:  VGSTLFYIYK

TrEMBL top hitse value%identityAlignment
A0A0A0KM65 Uncharacterized protein2.8e-4371.43Show/hide
Query:  IIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATAA
        +IPIK  AA+  F  LI ++A+  EIRPSEHGLEFQSPPP G+KSSPEMRSFF G +SP P+  LP+PK +NSSE+PGWW H DGGNKR+RNALLVATAA
Subjt:  IIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKDGSLRSV
        CGITGVTLLVGSTLFYI+K  + RS+
Subjt:  CGITGVTLLVGSTLFYIYKDGSLRSV

A0A6J1CZN3 uncharacterized protein LOC1110157293.3e-4477.69Show/hide
Query:  IIPIKPVAAMAVFLPLIVAV----ASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLV
        +IPIK  AAMAV LPLIVAV     +ALEIRPSEHGLEFQSPPPAG+KSSPEM SFF G SSP PD  LPLPKAMNSSEAPGWWT RDGG+ R+RNALLV
Subjt:  IIPIKPVAAMAVFLPLIVAV----ASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLV

Query:  ATAACGITGVTLLVGSTLFYIYKDGSLRSV
        ATAA GITGVTLLVGS LFY+YK  + RS+
Subjt:  ATAACGITGVTLLVGSTLFYIYKDGSLRSV

A0A6J1EFQ9 uncharacterized protein LOC1114337682.0e-4679.37Show/hide
Query:  IIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATAA
        +I IK +AAMAV+L  IVA+A+ALEIRPSEHGLEFQS P AG+KSSPEMRSFF GTSSP P+  LPLPKAMNSSEAPGWWTHRDGG+KR+RNALLVATAA
Subjt:  IIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKDGSLRSV
        CGITGVTLLVGSTL+YI+K  + RS+
Subjt:  CGITGVTLLVGSTLFYIYKDGSLRSV

A0A6J1EFW4 uncharacterized protein LOC1114330176.8e-5899.17Show/hide
Query:  MIIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATA
        MIIPIKPVAAM VFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATA
Subjt:  MIIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATA

Query:  ACGITGVTLLVGSTLFYIYK
        ACGITGVTLLVGSTLFYIYK
Subjt:  ACGITGVTLLVGSTLFYIYK

A0A6J1KMY3 uncharacterized protein LOC1114971301.2e-4678.57Show/hide
Query:  IIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATAA
        +I IK +AAMAV+L  IVA+ +ALEIRPSEHGLEFQSPP AG+KSSPEMRSFF GTSSP P+  LPLPKAMNSSEAPGWWTHRDGG+KR+RNALLVATAA
Subjt:  IIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATAA

Query:  CGITGVTLLVGSTLFYIYKDGSLRSV
        CG+TGVTLLVGSTL+YI+K  + RS+
Subjt:  CGITGVTLLVGSTLFYIYKDGSLRSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30515.1 unknown protein2.7e-0634.19Show/hide
Query:  PVAAMAVFLPLIV--AVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAM---NSSEAPGWWTHRDGGNKRVRN-ALLVATA
        P+ +M +   +++   + +A E+RPS+HGLE+   P  GE S  EM SFF G  S    T++  P +    ++ ++P     +D  + RV N  L+V + 
Subjt:  PVAAMAVFLPLIV--AVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAM---NSSEAPGWWTHRDGGNKRVRN-ALLVATA

Query:  ACGITGVTLLVGSTLFY
         CG++GV L+V S L Y
Subjt:  ACGITGVTLLVGSTLFY

AT4G21740.1 unknown protein3.6e-1139.32Show/hide
Query:  FLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSP--EMRSFF--VGTSSPIPDTTLPLPK--AMNSSEAPGWWTHRDGGNKR----VRNALLVATAACG
        FL +    + A E+RPS+HGL++Q   P  E  SP  +M+SFF    +SSP P     LPK  A +  +   WW  RDG   R    +R+  L A+  CG
Subjt:  FLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSP--EMRSFF--VGTSSPIPDTTLPLPK--AMNSSEAPGWWTHRDGGNKR----VRNALLVATAACG

Query:  ITGVTLLVGSTLFYIYK
        ++GV LLV  TL Y ++
Subjt:  ITGVTLLVGSTLFYIYK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATTCCGATCAAACCAGTAGCGGCGATGGCCGTGTTCTTGCCACTGATCGTGGCGGTCGCATCCGCGCTGGAGATACGGCCGTCGGAGCACGGGCTGGAGTTTCA
GAGCCCTCCGCCTGCGGGAGAAAAATCGTCGCCAGAGATGCGGTCGTTCTTCGTTGGAACATCGTCGCCAATTCCGGATACAACATTGCCGTTGCCGAAGGCGATGAATT
CGAGCGAGGCGCCGGGATGGTGGACCCACCGTGACGGTGGAAATAAACGAGTAAGAAATGCATTATTGGTGGCGACGGCGGCTTGTGGAATTACAGGTGTCACTTTATTA
GTGGGTTCTACGCTATTCTACATTTATAAGGATGGTTCCTTACGATCTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAATTCCGATCAAACCAGTAGCGGCGATGGCCGTGTTCTTGCCACTGATCGTGGCGGTCGCATCCGCGCTGGAGATACGGCCGTCGGAGCACGGGCTGGAGTTTCA
GAGCCCTCCGCCTGCGGGAGAAAAATCGTCGCCAGAGATGCGGTCGTTCTTCGTTGGAACATCGTCGCCAATTCCGGATACAACATTGCCGTTGCCGAAGGCGATGAATT
CGAGCGAGGCGCCGGGATGGTGGACCCACCGTGACGGTGGAAATAAACGAGTAAGAAATGCATTATTGGTGGCGACGGCGGCTTGTGGAATTACAGGTGTCACTTTATTA
GTGGGTTCTACGCTATTCTACATTTATAAGGATGGTTCCTTACGATCTGTTTAA
Protein sequenceShow/hide protein sequence
MIIPIKPVAAMAVFLPLIVAVASALEIRPSEHGLEFQSPPPAGEKSSPEMRSFFVGTSSPIPDTTLPLPKAMNSSEAPGWWTHRDGGNKRVRNALLVATAACGITGVTLL
VGSTLFYIYKDGSLRSV