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Carg19326 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19326
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFAD-binding Berberine family protein
Genome locationCarg_Chr03:10037180..10038870
RNA-Seq ExpressionCarg19326
SyntenyCarg19326
Gene Ontology termsGO:0016491 - oxidoreductase activity (molecular function)
GO:0071949 - FAD binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581485.1 Berberine bridge enzyme-like 21, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2590.28Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLS
        MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGL KENCIELSWIDSVLWW    +G S
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLS

KAG7034775.1 Berberine bridge enzyme-like 21, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-43100Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLSWCRRSWRPTMVAIIMVTPQLL
        MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLSWCRRSWRPTMVAIIMVTPQLL
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLSWCRRSWRPTMVAIIMVTPQLL

XP_022925694.1 berberine bridge enzyme-like 21 [Cucurbita moschata]1.0e-2590.28Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLS
        MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGL KENCIELSWIDSVLWW    +G S
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLS

XP_022977485.1 berberine bridge enzyme-like 21 [Cucurbita maxima]1.0e-2590.28Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLS
        MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGL KENCIELSWIDSVLWW    +G S
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLS

XP_023544589.1 berberine bridge enzyme-like 21 [Cucurbita pepo subsp. pepo]5.1e-2588.89Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLS
        MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLL KEFPELGL KENCIELSWIDSVLWW    +G S
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLS

TrEMBL top hitse value%identityAlignment
A0A0A0KM88 FAD-binding PCMH-type domain-containing protein1.5e-2287.5Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW
        MRLLLQPVSSK+KKGTRT+RASVVALFLGKSEE+VSLL KE PELGL KENC E+SWIDSVLWW
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW

A0A1S3AYZ9 reticuline oxidase-like protein8.8e-2385.94Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW
        MRLLLQPVSSK+KKGTRT+RA+V+ALFLGKSEE+VSLL KEFPELGL KENC E+SWIDSVLWW
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW

A0A5A7UG36 Reticuline oxidase-like protein2.6e-2284.38Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW
        MRLLLQPVSSK+KKGTRT+RA+V+ALFLGKSEE+VSLL K+FPELGL KENC E+SWIDSVLWW
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW

A0A6J1ECY1 berberine bridge enzyme-like 215.0e-2690.28Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLS
        MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGL KENCIELSWIDSVLWW    +G S
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLS

A0A6J1IMG1 berberine bridge enzyme-like 215.0e-2690.28Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLS
        MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGL KENCIELSWIDSVLWW    +G S
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLS

SwissProt top hitse value%identityAlignment
Q9LPC3 Berberine bridge enzyme-like 12.7e-1665.62Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW
        MRL+LQPV+   +  T+TVRASVVALFLGK  +++SLL KEFPELGL  ENC E++WI SV+WW
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW

Q9SA89 Berberine bridge enzyme-like 121.3e-1051.56Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW
        MR+LL   SS  +  T TV   + AL+LGK+++VV  + +EFPELGL KE+C E++WI S+LWW
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW

Q9SA99 Berberine bridge enzyme-like 21.3e-1565.62Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW
        MRLLLQPV+   +   +TVRASVVALFLG    V+S+L KEFPELGL KENC E++WI SV+WW
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW

Q9SVG3 Berberine bridge enzyme-like 215.3e-1763.08Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWE
        +R+L+QPV+   +K  +TVRA+VVALFLG++EEVV+LLGKEFPEL L KENC E++W  S LWW+
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWE

Q9SVG4 Berberine bridge enzyme-like 192.4e-1764.62Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWE
        MR+L+QPV+   +K  +TVRASVVALFLG+++EVV+LL KEFPELGL KENC E++W  S LWW+
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWE

Arabidopsis top hitse value%identityAlignment
AT1G01980.1 FAD-binding Berberine family protein1.9e-1765.62Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW
        MRL+LQPV+   +  T+TVRASVVALFLGK  +++SLL KEFPELGL  ENC E++WI SV+WW
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW

AT1G11770.1 FAD-binding Berberine family protein9.4e-1765.62Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW
        MRLLLQPV+   +   +TVRASVVALFLG    V+S+L KEFPELGL KENC E++WI SV+WW
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWW

AT4G20830.1 FAD-binding Berberine family protein1.7e-1864.62Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWE
        MR+L+QPV+   +K  +TVRASVVALFLG+++EVV+LL KEFPELGL KENC E++W  S LWW+
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWE

AT4G20830.2 FAD-binding Berberine family protein1.7e-1864.62Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWE
        MR+L+QPV+   +K  +TVRASVVALFLG+++EVV+LL KEFPELGL KENC E++W  S LWW+
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWE

AT4G20840.1 FAD-binding Berberine family protein3.8e-1863.08Show/hide
Query:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWE
        +R+L+QPV+   +K  +TVRA+VVALFLG++EEVV+LLGKEFPEL L KENC E++W  S LWW+
Subjt:  MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTACTCTTACAGCCAGTTTCCAGTAAAGTGAAGAAGGGGACTCGAACAGTCAGAGCCTCAGTCGTGGCCTTGTTCCTCGGGAAATCGGAAGAAGTCGTTTCCTT
GTTGGGAAAAGAATTCCCCGAATTGGGGTTGCTGAAAGAGAACTGTATCGAACTTAGTTGGATCGACTCTGTTCTCTGGTGGGAGCTCCAGTCTTCTGGTTTGAGTTGGT
GTAGAAGAAGTTGGAGGCCGACCATGGTGGCCATCATCATGGTTACACCACAGCTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTACTCTTACAGCCAGTTTCCAGTAAAGTGAAGAAGGGGACTCGAACAGTCAGAGCCTCAGTCGTGGCCTTGTTCCTCGGGAAATCGGAAGAAGTCGTTTCCTT
GTTGGGAAAAGAATTCCCCGAATTGGGGTTGCTGAAAGAGAACTGTATCGAACTTAGTTGGATCGACTCTGTTCTCTGGTGGGAGCTCCAGTCTTCTGGTTTGAGTTGGT
GTAGAAGAAGTTGGAGGCCGACCATGGTGGCCATCATCATGGTTACACCACAGCTTTTGTAA
Protein sequenceShow/hide protein sequence
MRLLLQPVSSKVKKGTRTVRASVVALFLGKSEEVVSLLGKEFPELGLLKENCIELSWIDSVLWWELQSSGLSWCRRSWRPTMVAIIMVTPQLL