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Carg19331 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19331
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr03:10059170..10059751
RNA-Seq ExpressionCarg19331
SyntenyCarg19331
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594408.1 putative WRKY transcription factor 14, partial [Cucurbita argyrosperma subsp. sororia]2.6e-0641.32Show/hide
Query:  DEDEFSFGDPFC-GAPIRDPLVED-------------------RGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPT----------PTPTPTL---TSS
        D  ++SFGDPFC  AP+RDPL +D                    GSV  G   +DE+++ PSN+FSRML ISPP PT          P  +P L    +S
Subjt:  DEDEFSFGDPFC-GAPIRDPLVED-------------------RGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPT----------PTPTPTL---TSS

Query:  PS-----NFLIPSPLHISSPT
        PS     + L PS L ISSPT
Subjt:  PS-----NFLIPSPLHISSPT

KAG7026413.1 putative WRKY transcription factor 35, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-0739.68Show/hide
Query:  SSKHEDEDEFSFGDPFC-GAPIRDPLVED-------------------RGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPT----------PTPTPTLT
        SS+ +D  ++SFGDPFC  AP+RDPL +D                    GSV  G   +DE+++ PSN+FSRML ISPP PT          P  +P L 
Subjt:  SSKHEDEDEFSFGDPFC-GAPIRDPLVED-------------------RGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPT----------PTPTPTLT

Query:  SSPSNFLI--------PSPLHISSPT
         + ++ LI        PS L ISSPT
Subjt:  SSPSNFLI--------PSPLHISSPT

KAG7034780.1 hypothetical protein SDJN02_04512, partial [Cucurbita argyrosperma subsp. argyrosperma]6.9e-68100Show/hide
Query:  MRLQAYYYWEFSSKHEDEDEFSFGDPFCGAPIRDPLVEDRGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPTPTPTPTLTSSPSNFLIPSPLHISSPTK
        MRLQAYYYWEFSSKHEDEDEFSFGDPFCGAPIRDPLVEDRGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPTPTPTPTLTSSPSNFLIPSPLHISSPTK
Subjt:  MRLQAYYYWEFSSKHEDEDEFSFGDPFCGAPIRDPLVEDRGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPTPTPTPTLTSSPSNFLIPSPLHISSPTK

Query:  MHLENSVPPLSVLFLFRHVYFLGLHLGPAS
        MHLENSVPPLSVLFLFRHVYFLGLHLGPAS
Subjt:  MHLENSVPPLSVLFLFRHVYFLGLHLGPAS

XP_022977464.1 probable WRKY transcription factor 14 isoform X1 [Cucurbita maxima]2.7e-3281Show/hide
Query:  WEFSSK--------HEDEDEFSFGDPFCGAPIRDPLVEDRGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPTPTPTPTLTSSPSNFLIPSPLHISSPTK
        W+FSSK         E+EDEFSFGDPFCGA IRDPLVEDRGSV FGVDEDDELIKTPSNVFSRMLHISP      PTPTLTSSPSNFLIPSPLHISSPTK
Subjt:  WEFSSK--------HEDEDEFSFGDPFCGAPIRDPLVEDRGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPTPTPTPTLTSSPSNFLIPSPLHISSPTK

XP_022977465.1 probable WRKY transcription factor 14 isoform X2 [Cucurbita maxima]2.7e-3281Show/hide
Query:  WEFSSK--------HEDEDEFSFGDPFCGAPIRDPLVEDRGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPTPTPTPTLTSSPSNFLIPSPLHISSPTK
        W+FSSK         E+EDEFSFGDPFCGA IRDPLVEDRGSV FGVDEDDELIKTPSNVFSRMLHISP      PTPTLTSSPSNFLIPSPLHISSPTK
Subjt:  WEFSSK--------HEDEDEFSFGDPFCGAPIRDPLVEDRGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPTPTPTPTLTSSPSNFLIPSPLHISSPTK

TrEMBL top hitse value%identityAlignment
A0A6J1EKT0 probable WRKY transcription factor 352.8e-0641.32Show/hide
Query:  DEDEFSFGDPFC-GAPIRDPL---------------VEDR----GSVLFGVDEDDELIKTPSNVFSRMLHISPPTPT----------PTPTPTLTSSPSN
        D  ++SFGDPFC  AP+RDPL               +ED+    GSV  G   +DE +K PSN+FSRML ISPP PT          P  +P L  + ++
Subjt:  DEDEFSFGDPFC-GAPIRDPL---------------VEDR----GSVLFGVDEDDELIKTPSNVFSRMLHISPPTPT----------PTPTPTLTSSPSN

Query:  FLI--------PSPLHISSPT
         LI        PS L ISSPT
Subjt:  FLI--------PSPLHISSPT

A0A6J1IME2 probable WRKY transcription factor 14 isoform X21.3e-3281Show/hide
Query:  WEFSSK--------HEDEDEFSFGDPFCGAPIRDPLVEDRGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPTPTPTPTLTSSPSNFLIPSPLHISSPTK
        W+FSSK         E+EDEFSFGDPFCGA IRDPLVEDRGSV FGVDEDDELIKTPSNVFSRMLHISP      PTPTLTSSPSNFLIPSPLHISSPTK
Subjt:  WEFSSK--------HEDEDEFSFGDPFCGAPIRDPLVEDRGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPTPTPTPTLTSSPSNFLIPSPLHISSPTK

A0A6J1IRF8 probable WRKY transcription factor 14 isoform X11.3e-3281Show/hide
Query:  WEFSSK--------HEDEDEFSFGDPFCGAPIRDPLVEDRGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPTPTPTPTLTSSPSNFLIPSPLHISSPTK
        W+FSSK         E+EDEFSFGDPFCGA IRDPLVEDRGSV FGVDEDDELIKTPSNVFSRMLHISP      PTPTLTSSPSNFLIPSPLHISSPTK
Subjt:  WEFSSK--------HEDEDEFSFGDPFCGAPIRDPLVEDRGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPTPTPTPTLTSSPSNFLIPSPLHISSPTK

A0A6J1KR23 probable WRKY transcription factor 141.6e-0640.5Show/hide
Query:  DEDEFSFGDPFC-GAPIRDPL---------------VEDR----GSVLFGVDEDDELIKTPSNVFSRMLHISPPTPT----------PTPTPTLTSSPSN
        D  ++SFGDPFC  AP+RDPL               +ED+    GSV  G   +DE++K PSN+FSRML ISPP PT          P  +P L  + ++
Subjt:  DEDEFSFGDPFC-GAPIRDPL---------------VEDR----GSVLFGVDEDDELIKTPSNVFSRMLHISPPTPT----------PTPTPTLTSSPSN

Query:  FLI--------PSPLHISSPT
         L+        PS L ISSPT
Subjt:  FLI--------PSPLHISSPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTTGCAGGCATATTATTATTGGGAATTTTCATCCAAACATGAAGATGAAGATGAATTCAGTTTCGGGGATCCCTTTTGTGGTGCACCCATCAGAGATCCACTTGT
TGAGGACAGAGGAAGTGTGTTGTTTGGTGTGGATGAAGACGATGAGCTTATCAAAACACCCTCCAATGTATTCTCACGCATGCTTCACATCTCGCCTCCAACACCAACAC
CAACACCAACACCAACACTTACTTCTTCCCCTTCTAATTTCCTAATTCCTTCTCCCCTTCACATCTCTTCTCCTACCAAGATGCACCTGGAAAACAGTGTTCCTCCGCTT
TCTGTTCTGTTTTTATTTCGACATGTATATTTCCTTGGACTTCACCTTGGGCCTGCATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTTGCAGGCATATTATTATTGGGAATTTTCATCCAAACATGAAGATGAAGATGAATTCAGTTTCGGGGATCCCTTTTGTGGTGCACCCATCAGAGATCCACTTGT
TGAGGACAGAGGAAGTGTGTTGTTTGGTGTGGATGAAGACGATGAGCTTATCAAAACACCCTCCAATGTATTCTCACGCATGCTTCACATCTCGCCTCCAACACCAACAC
CAACACCAACACCAACACTTACTTCTTCCCCTTCTAATTTCCTAATTCCTTCTCCCCTTCACATCTCTTCTCCTACCAAGATGCACCTGGAAAACAGTGTTCCTCCGCTT
TCTGTTCTGTTTTTATTTCGACATGTATATTTCCTTGGACTTCACCTTGGGCCTGCATCATAA
Protein sequenceShow/hide protein sequence
MRLQAYYYWEFSSKHEDEDEFSFGDPFCGAPIRDPLVEDRGSVLFGVDEDDELIKTPSNVFSRMLHISPPTPTPTPTPTLTSSPSNFLIPSPLHISSPTKMHLENSVPPL
SVLFLFRHVYFLGLHLGPAS