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Carg19374 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19374
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAuxin-responsive protein
Genome locationCarg_Chr19:7010332..7010754
RNA-Seq ExpressionCarg19374
SyntenyCarg19374
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572079.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]1.1e-74100Show/hide
Query:  MATAPHGHGSHHSSSLSQYNFRALSINTSPSTPNPFPNFPAMPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLT
        MATAPHGHGSHHSSSLSQYNFRALSINTSPSTPNPFPNFPAMPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLT
Subjt:  MATAPHGHGSHHSSSLSQYNFRALSINTSPSTPNPFPNFPAMPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLT

Query:  HPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        HPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  HPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

KAG7011743.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-74100Show/hide
Query:  MATAPHGHGSHHSSSLSQYNFRALSINTSPSTPNPFPNFPAMPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLT
        MATAPHGHGSHHSSSLSQYNFRALSINTSPSTPNPFPNFPAMPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLT
Subjt:  MATAPHGHGSHHSSSLSQYNFRALSINTSPSTPNPFPNFPAMPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLT

Query:  HPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        HPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  HPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

XP_022952665.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]6.9e-50100Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

XP_022969389.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]4.5e-4997.98Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        MPIPKPAALKHIVKRCSSLGRKQDA ATATAYDGVPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

XP_023554806.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]7.7e-4997.98Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        MPIPKPAALKHIVKRCSSLGRKQDAAAT TAYDGVPKGHFAVYVGE+RSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

TrEMBL top hitse value%identityAlignment
A0A0A0K5S8 Uncharacterized protein2.8e-4490.91Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        M IPKP ALK IVKRCSSLGRKQD  AT  AYDGVPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGF HHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

A0A1S3BJD0 auxin-induced protein 15A1.4e-4388.89Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        M IPKP +LK IVKRCSSLGRKQD  +T  AYDGVPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGF HHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

A0A6J1GME7 auxin-responsive protein SAUR50-like3.4e-50100Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

A0A6J1I2G2 auxin-responsive protein SAUR50-like2.2e-4997.98Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        MPIPKPAALKHIVKRCSSLGRKQDA ATATAYDGVPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

A0A6J1JNJ6 auxin-responsive protein SAUR50-like3.7e-4185.85Show/hide
Query:  MPIPKP----AALKHIVKRCSSLGRKQDAAATATA---YDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS
        M I KP    AALK IVKRCSSLGRKQ+AA  ATA   +D VPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS
Subjt:  MPIPKP----AALKHIVKRCSSLGRKQDAAATATA---YDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS

Query:  LTAALK
        LTAALK
Subjt:  LTAALK

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR502.7e-2861.22Show/hide
Query:  IPKPAALKHIVKRCSSLGRKQDAAATATAYD-GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        + + A LK I+KRCSSLG+K             VPKGHF VYVGENRSRY+VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+VF++LT+ ++
Subjt:  IPKPAALKHIVKRCSSLGRKQDAAATATAYD-GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

P0DKL1 Auxin-responsive protein SAUR507.5e-2358.14Show/hide
Query:  ALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS
        A+K I+K+CSS G+  D +      + VPKGHF VYVGE R+RY+VPIS L HP FQ LL+ +EEEFGF+H MG+ IPC+EV F S
Subjt:  ALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS

P33081 Auxin-induced protein 15A9.8e-1554.43Show/hide
Query:  RKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFRSLTAAL
        RK   AA A      PKG+ AVYVGE   R+V+P+S L  P FQ LL  AEEEFG+ H M GLTIPC E VF+ +T+ L
Subjt:  RKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFRSLTAAL

P33083 Auxin-induced protein 6B1.7e-1456.16Show/hide
Query:  ATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHH-HMGLTIPCEEVVFRSLTAAL
        A++ A D V KG+ AVYVGE   R+V+P+S L  P FQ LL  AEEEFG+HH + GLTIPC E VF+ +T+ L
Subjt:  ATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHH-HMGLTIPCEEVVFRSLTAAL

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 104.7e-2559.18Show/hide
Query:  AALKHIVKRCSSLGRKQDAAATATAYD-----GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        A++K IVKRCSSL + ++        +      VPKGHF VYVG NRSRY+VPIS L H +FQ LLRLAEEEFGF H MGLTIPC+EV FRSL +  +
Subjt:  AALKHIVKRCSSLGRKQDAAATATAYD-----GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family1.5e-2963.11Show/hide
Query:  AMPIPKPAALKHIVKRCSSLGRKQDAAATATAYD---GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTA
        A  + + A +K I+KRCSSLG+KQ              VPKGHF VYVGENR RYVVPIS LT P+FQ LL+ AEEEFGF H MGLTIPCEEVVFRSLT+
Subjt:  AMPIPKPAALKHIVKRCSSLGRKQDAAATATAYD---GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTA

Query:  ALK
         L+
Subjt:  ALK

AT2G21220.1 SAUR-like auxin-responsive protein family4.2e-2964.58Show/hide
Query:  IPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL
        + + A LK I+KRCSSL + Q         D VPKGHF VYVGE RSRY+VPIS LTHP F+ LL+ AEEEFGF+H MGLTIPCEEVVFRSLT+ +
Subjt:  IPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL

AT4G34760.1 SAUR-like auxin-responsive protein family1.9e-2961.22Show/hide
Query:  IPKPAALKHIVKRCSSLGRKQDAAATATAYD-GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        + + A LK I+KRCSSLG+K             VPKGHF VYVGENRSRY+VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+VF++LT+ ++
Subjt:  IPKPAALKHIVKRCSSLGRKQDAAATATAYD-GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

AT4G36110.1 SAUR-like auxin-responsive protein family9.4e-2961.86Show/hide
Query:  IPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        + + A+LK I+KRCSSLG+K         ++ VPKGHF VYVG++RSRYVVPIS L H +FQ LL+LAEEEFGF H MGLTIPC+EVVFRSL +  +
Subjt:  IPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

AT4G38860.1 SAUR-like auxin-responsive protein family6.1e-2863.27Show/hide
Query:  IPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFRSLTAALK
        + + A LK I+KRCSSLG+KQ         D VPKGHF VYVGE R+RY+VPIS LTHP+F  LL+ AEEEFGF H M GLTIPCEEVVF SLT+ ++
Subjt:  IPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFRSLTAALK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGGCACCCCATGGCCATGGCTCCCACCATTCCTCATCTCTCTCTCAGTACAACTTCCGTGCTCTCTCAATAAATACCTCTCCTTCCACTCCCAATCCCTTTCC
AAATTTCCCCGCAATGCCGATTCCCAAGCCCGCCGCTCTCAAGCACATTGTCAAGCGCTGCTCCAGCTTAGGCCGGAAGCAAGACGCCGCCGCTACCGCCACCGCCTACG
ACGGCGTTCCCAAGGGACATTTCGCCGTCTACGTCGGCGAGAATCGGAGCCGATATGTCGTCCCCATTTCCCTCTTGACTCACCCCGATTTTCAGTGTCTCCTCCGCCTC
GCGGAGGAGGAATTCGGCTTCCACCACCATATGGGCCTCACTATTCCTTGTGAAGAGGTGGTTTTCCGCTCACTCACCGCCGCTCTCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACGGCACCCCATGGCCATGGCTCCCACCATTCCTCATCTCTCTCTCAGTACAACTTCCGTGCTCTCTCAATAAATACCTCTCCTTCCACTCCCAATCCCTTTCC
AAATTTCCCCGCAATGCCGATTCCCAAGCCCGCCGCTCTCAAGCACATTGTCAAGCGCTGCTCCAGCTTAGGCCGGAAGCAAGACGCCGCCGCTACCGCCACCGCCTACG
ACGGCGTTCCCAAGGGACATTTCGCCGTCTACGTCGGCGAGAATCGGAGCCGATATGTCGTCCCCATTTCCCTCTTGACTCACCCCGATTTTCAGTGTCTCCTCCGCCTC
GCGGAGGAGGAATTCGGCTTCCACCACCATATGGGCCTCACTATTCCTTGTGAAGAGGTGGTTTTCCGCTCACTCACCGCCGCTCTCAAATGA
Protein sequenceShow/hide protein sequence
MATAPHGHGSHHSSSLSQYNFRALSINTSPSTPNPFPNFPAMPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRL
AEEEFGFHHHMGLTIPCEEVVFRSLTAALK