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Carg19378 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19378
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGAGA-binding transcriptional activator
Genome locationCarg_Chr19:6962396..6964561
RNA-Seq ExpressionCarg19378
SyntenyCarg19378
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572072.1 hypothetical protein SDJN03_28800, partial [Cucurbita argyrosperma subsp. sororia]7.8e-2879.78Show/hide
Query:  MRTKPPTIPSPLPFLFSLLRLCQSQEQQFLLHSANRRPIAIFFSISTRHCICKYTALLFPLPDSFPAQLFSSFSFHQELIELLPLLFDS
        MRTKPPTIPSPLPFLFSLLRLCQSQEQQFLLHSANRRPIAIFFSISTRHCI               +  FSSFSFHQELIELLPLLFDS
Subjt:  MRTKPPTIPSPLPFLFSLLRLCQSQEQQFLLHSANRRPIAIFFSISTRHCICKYTALLFPLPDSFPAQLFSSFSFHQELIELLPLLFDS

KAG6572073.1 Protein BASIC PENTACYSTEINE4, partial [Cucurbita argyrosperma subsp. sororia]2.1e-04100Show/hide
Query:  MDDGRHHENGRHKLDYFRGSPSP
        MDDGRHHENGRHKLDYFRGSPSP
Subjt:  MDDGRHHENGRHKLDYFRGSPSP

KAG7011739.1 hypothetical protein SDJN02_26645, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-79100Show/hide
Query:  MRTKPPTIPSPLPFLFSLLRLCQSQEQQFLLHSANRRPIAIFFSISTRHCICKYTALLFPLPDSFPAQLFSSFSFHQELIELLPLLFDSGTAMDDGRHHE
        MRTKPPTIPSPLPFLFSLLRLCQSQEQQFLLHSANRRPIAIFFSISTRHCICKYTALLFPLPDSFPAQLFSSFSFHQELIELLPLLFDSGTAMDDGRHHE
Subjt:  MRTKPPTIPSPLPFLFSLLRLCQSQEQQFLLHSANRRPIAIFFSISTRHCICKYTALLFPLPDSFPAQLFSSFSFHQELIELLPLLFDSGTAMDDGRHHE

Query:  NGRHKLDYFRGSPSPMLFRKSNELETMYAVAYGAPSSCKGTERLGHE
        NGRHKLDYFRGSPSPMLFRKSNELETMYAVAYGAPSSCKGTERLGHE
Subjt:  NGRHKLDYFRGSPSPMLFRKSNELETMYAVAYGAPSSCKGTERLGHE

XP_022952752.1 protein BASIC PENTACYSTEINE4-like [Cucurbita moschata]2.1e-04100Show/hide
Query:  MDDGRHHENGRHKLDYFRGSPSP
        MDDGRHHENGRHKLDYFRGSPSP
Subjt:  MDDGRHHENGRHKLDYFRGSPSP

XP_023554072.1 protein BASIC PENTACYSTEINE4-like [Cucurbita pepo subsp. pepo]2.1e-04100Show/hide
Query:  MDDGRHHENGRHKLDYFRGSPSP
        MDDGRHHENGRHKLDYFRGSPSP
Subjt:  MDDGRHHENGRHKLDYFRGSPSP

TrEMBL top hitse value%identityAlignment
A0A1S3BIS4 GAGA-binding transcriptional activator8.5e-0495.65Show/hide
Query:  MDDGRHHENGRHKLDYFRGSPSP
        MDDGR HENGRHKLDYFRGSPSP
Subjt:  MDDGRHHENGRHKLDYFRGSPSP

A0A6J1F5G6 GAGA-binding transcriptional activator8.5e-0495.65Show/hide
Query:  MDDGRHHENGRHKLDYFRGSPSP
        MDDGR HENGRHKLDYFRGSPSP
Subjt:  MDDGRHHENGRHKLDYFRGSPSP

A0A6J1GLG9 GAGA-binding transcriptional activator1.0e-04100Show/hide
Query:  MDDGRHHENGRHKLDYFRGSPSP
        MDDGRHHENGRHKLDYFRGSPSP
Subjt:  MDDGRHHENGRHKLDYFRGSPSP

A0A6J1HW46 GAGA-binding transcriptional activator1.0e-04100Show/hide
Query:  MDDGRHHENGRHKLDYFRGSPSP
        MDDGRHHENGRHKLDYFRGSPSP
Subjt:  MDDGRHHENGRHKLDYFRGSPSP

A0A6J1I2R0 GAGA-binding transcriptional activator8.5e-0495.65Show/hide
Query:  MDDGRHHENGRHKLDYFRGSPSP
        MDDGR HENGRHKLDYFRGSPSP
Subjt:  MDDGRHHENGRHKLDYFRGSPSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACGAAGCCACCCACCATTCCTTCACCACTTCCCTTTCTGTTCTCTCTTCTCCGACTGTGTCAATCACAAGAACAGCAATTTCTTCTTCATTCTGCAAATCGCCG
TCCGATCGCCATTTTCTTCTCCATTTCCACTCGCCATTGCATCTGTAAGTATACCGCTCTTCTATTTCCACTTCCTGATTCCTTTCCTGCTCAGTTGTTTTCTTCGTTCT
CTTTCCATCAGGAGTTGATCGAGCTGCTTCCGCTGCTGTTTGATTCCGGTACGGCTATGGATGATGGCCGGCATCATGAAAATGGGAGGCACAAGCTAGACTACTTCAGA
GGGAGCCCCTCGCCGATGTTGTTTCGAAAATCGAATGAATTGGAAACGATGTATGCAGTGGCATATGGCGCCCCCTCATCATGTAAAGGAACCGAACGCCTTGGTCATGA
ATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAACGAAGCCACCCACCATTCCTTCACCACTTCCCTTTCTGTTCTCTCTTCTCCGACTGTGTCAATCACAAGAACAGCAATTTCTTCTTCATTCTGCAAATCGCCG
TCCGATCGCCATTTTCTTCTCCATTTCCACTCGCCATTGCATCTGTAAGTATACCGCTCTTCTATTTCCACTTCCTGATTCCTTTCCTGCTCAGTTGTTTTCTTCGTTCT
CTTTCCATCAGGAGTTGATCGAGCTGCTTCCGCTGCTGTTTGATTCCGGTACGGCTATGGATGATGGCCGGCATCATGAAAATGGGAGGCACAAGCTAGACTACTTCAGA
GGGAGCCCCTCGCCGATGTTGTTTCGAAAATCGAATGAATTGGAAACGATGTATGCAGTGGCATATGGCGCCCCCTCATCATGTAAAGGAACCGAACGCCTTGGTCATGA
ATAA
Protein sequenceShow/hide protein sequence
MRTKPPTIPSPLPFLFSLLRLCQSQEQQFLLHSANRRPIAIFFSISTRHCICKYTALLFPLPDSFPAQLFSSFSFHQELIELLPLLFDSGTAMDDGRHHENGRHKLDYFR
GSPSPMLFRKSNELETMYAVAYGAPSSCKGTERLGHE