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Carg19389 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19389
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionB-box zinc finger protein 20 isoform X1
Genome locationCarg_Chr19:6896390..6897166
RNA-Seq ExpressionCarg19389
SyntenyCarg19389
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572061.1 B-box zinc finger protein 21, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3157.62Show/hide
Query:  MDVKTGSSHACSKKPKIA----------------------------------------------------------------LDAFANQNLESQQESLGT
        MDVKTGSSHACSKKPKIA                                                                LDAFANQNLESQQESLGT
Subjt:  MDVKTGSSHACSKKPKIA----------------------------------------------------------------LDAFANQNLESQQESLGT

Query:  IRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEMARLLIRSSAASDLKQIW
        IRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEMARLLIRSSAASDLKQIW
Subjt:  IRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEMARLLIRSSAASDLKQIW
KAG7011728.1 hypothetical protein SDJN02_26634, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-40100Show/hide
Query:  MDVKTGSSHACSKKPKIALDAFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEMARLLIRSSAASDLKQIW
        MDVKTGSSHACSKKPKIALDAFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEMARLLIRSSAASDLKQIW
Subjt:  MDVKTGSSHACSKKPKIALDAFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEMARLLIRSSAASDLKQIW
XP_022135715.1 B-box zinc finger protein 20 isoform X1 [Momordica charantia]1.1e-1074Show/hide
Query:  AFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEM
        AF NQNLE Q ESLGT RFGNTL+F GKISQT SWNG  IS KTC+ E+M
Subjt:  AFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEM
XP_022926713.1 B-box zinc finger protein 20-like isoform X1 [Cucurbita moschata]4.4e-1072.55Show/hide
Query:  AFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEMA
        A  NQNLE QQESLG  RFGNTL+FVGK SQT  WNG  ISMKTC+ E+MA
Subjt:  AFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEMA
XP_023531436.1 B-box zinc finger protein 20-like isoform X1 [Cucurbita pepo subsp. pepo]2.6e-1072.55Show/hide
Query:  AFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEMA
        A  NQNLE QQESLG  RFGNTL+FVGK SQT  WNG  ISMKTC+ E+MA
Subjt:  AFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEMA
TrEMBL top hitse value%identityAlignment
A0A6J1C1T9 B-box zinc finger protein 20 isoform X15.6e-1174Show/hide
Query:  AFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEM
        AF NQNLE Q ESLGT RFGNTL+F GKISQT SWNG  IS KTC+ E+M
Subjt:  AFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEM
A0A6J1EIZ3 B-box zinc finger protein 20-like isoform X12.1e-1072.55Show/hide
Query:  AFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEMA
        A  NQNLE QQESLG  RFGNTL+FVGK SQT  WNG  ISMKTC+ E+MA
Subjt:  AFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEMA
A0A6J1I179 LOW QUALITY PROTEIN: B-box zinc finger protein 20-like8.0e-1072.55Show/hide
Query:  AFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEMA
        A  NQNLE QQESLG  RFGNTL+FVGK SQT SWNG  ISMKT + E+MA
Subjt:  AFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEMA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTTAAAACTGGAAGCTCTCACGCTTGCAGCAAGAAGCCTAAAATAGCCCTTGATGCATTTGCGAATCAGAATCTGGAGAGCCAGCAAGAATCGTTAGGCACCAT
CAGATTCGGCAACACCTTGAAATTTGTAGGTAAAATTTCTCAAACTACATCTTGGAATGGAGATAAAATCTCCATGAAAACTTGTAAAGCTGAAGAAATGGCACGGTTGC
TGATCAGATCATCAGCAGCTTCGGATCTGAAACAAATCTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTTAAAACTGGAAGCTCTCACGCTTGCAGCAAGAAGCCTAAAATAGCCCTTGATGCATTTGCGAATCAGAATCTGGAGAGCCAGCAAGAATCGTTAGGCACCAT
CAGATTCGGCAACACCTTGAAATTTGTAGGTAAAATTTCTCAAACTACATCTTGGAATGGAGATAAAATCTCCATGAAAACTTGTAAAGCTGAAGAAATGGCACGGTTGC
TGATCAGATCATCAGCAGCTTCGGATCTGAAACAAATCTGGTAAATTTTTAACTGGTTATGATGAGATTGGAATCGAAATCAATTTGTTTGTTTGGTTTGATTTGGCAAC
TAAACAACTTATTTTTGGGGACATTGGCAGATTATTATTTTAGGCCAAATATATTTTTGGTCCATCAAATTTAATTCGAAATGGTTTAGTTGAATAATAATAATAAATAA
AAGATTTGGCAGTTATCATTTTTATT
Protein sequenceShow/hide protein sequence
MDVKTGSSHACSKKPKIALDAFANQNLESQQESLGTIRFGNTLKFVGKISQTTSWNGDKISMKTCKAEEMARLLIRSSAASDLKQIW