; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg19391 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19391
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNuclear polyadenylated RNA-binding protein 3-like
Genome locationCarg_Chr19:6883498..6884091
RNA-Seq ExpressionCarg19391
SyntenyCarg19391
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572059.1 hypothetical protein SDJN03_28787, partial [Cucurbita argyrosperma subsp. sororia]6.4e-10299.49Show/hide
Query:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE
        MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE
Subjt:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE

Query:  DVYFLQNHAEDGFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        DVYFLQNHAEDGFAYGYNDAEE+ETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  DVYFLQNHAEDGFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

KAG7011726.1 hypothetical protein SDJN02_26632, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-102100Show/hide
Query:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE
        MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE
Subjt:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE

Query:  DVYFLQNHAEDGFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        DVYFLQNHAEDGFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  DVYFLQNHAEDGFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

XP_011658549.2 uncharacterized protein LOC101212092 [Cucumis sativus]1.1e-7278.68Show/hide
Query:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE
        MEA+SG    SSSSSSSS+EF FYDDFEYEFVED+ERLSNWE L+A DADSEM GNGGE++G NC V   + +DLREMISPV+ VPISL  EDRI   LE
Subjt:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE

Query:  DVYFLQNHAEDGFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        D YFL N AEDGFAYGYNDAEE     +D+ DDDEDE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  DVYFLQNHAEDGFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

XP_022969470.1 uncharacterized protein LOC111468462 [Cucurbita maxima]4.0e-9697.47Show/hide
Query:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE
        MEAMSGA SSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDL EMISPVVVVPISL AEDRIFDPLE
Subjt:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE

Query:  DVYFLQNHAEDGFAYGYNDAEENETDKDD-DDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        DVYFLQNHAEDGFAYGYNDAEE+ETDKDD DDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  DVYFLQNHAEDGFAYGYNDAEENETDKDD-DDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

XP_023553634.1 histone H2A.Z-specific chaperone CHZ1-like [Cucurbita pepo subsp. pepo]3.8e-9494.03Show/hide
Query:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE
        MEAMSGA    SSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLRE+ISPVVVVPISL AEDRIFDPLE
Subjt:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE

Query:  DVYFLQNHAEDGFAYGYNDAEENETDK----DDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHS
        DVYFLQNHAEDGFAYGYNDAEE+E DK    DDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHS
Subjt:  DVYFLQNHAEDGFAYGYNDAEENETDK----DDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHS

Query:  Y
        Y
Subjt:  Y

TrEMBL top hitse value%identityAlignment
A0A0A0K4F3 Uncharacterized protein5.2e-7378.68Show/hide
Query:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE
        MEA+SG    SSSSSSSS+EF FYDDFEYEFVED+ERLSNWE L+A DADSEM GNGGE++G NC V   + +DLREMISPV+ VPISL  EDRI   LE
Subjt:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE

Query:  DVYFLQNHAEDGFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        D YFL N AEDGFAYGYNDAEE     +D+ DDDEDE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  DVYFLQNHAEDGFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

A0A1S3BJG2 uncharacterized protein LOC1034903569.8e-7277.39Show/hide
Query:  MEAMSG--ASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDP
        MEA+SG  +SSSSSSSSSSS+EF FYDDFEYEFVED+ERLSNWE L+A DADSEM GNGGE++G+N  V   + +DLREMISPV+ VPISL  EDRI   
Subjt:  MEAMSG--ASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDP

Query:  LEDVYFLQNHAEDGFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        LED  FL N AEDGFAYGY+DAEE    +D+ DD++EDE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  LEDVYFLQNHAEDGFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

A0A5A7SRG7 Nuclear polyadenylated RNA-binding protein 3-like4.1e-7076.14Show/hide
Query:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE
        MEA+SG      SSSSSS+EF FYDDFEYEFVED+ERLSNWE L+A DADSEM GNGGE++G+N  V   + +DLREMISPV+ VPISL  EDRI   LE
Subjt:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE

Query:  DVYFLQNHAEDGFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        D  FL N AEDGFAYGY+DAEE    +D+ DDD+EDE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  DVYFLQNHAEDGFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

A0A6J1I004 uncharacterized protein LOC1114684622.0e-9697.47Show/hide
Query:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE
        MEAMSGA SSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDL EMISPVVVVPISL AEDRIFDPLE
Subjt:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLE

Query:  DVYFLQNHAEDGFAYGYNDAEENETDKDD-DDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        DVYFLQNHAEDGFAYGYNDAEE+ETDKDD DDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  DVYFLQNHAEDGFAYGYNDAEENETDKDD-DDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

A0A6J1I229 NAD-dependent protein deacetylase HST1-like3.1e-6572.41Show/hide
Query:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEK------EGKNCCVVARIPEDLREMISPVVVVPISLAAEDR
        MEA+SGA  +SSSSSSSSVEF F+DD EYEFVE+VERLSNWE L+ASDAD E+DGNG E+      E +NC V   +P+DLR     VV +PIS   E+R
Subjt:  MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEK------EGKNCCVVARIPEDLREMISPVVVVPISLAAEDR

Query:  IFDPLEDVYFLQNHAEDGFAYGYNDAEENETDKD-DDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGL
        I  P +DVY LQN  EDGFAYG N+ EE+E+D D  DDDDD DE DLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGL
Subjt:  IFDPLEDVYFLQNHAEDGFAYGYNDAEENETDKD-DDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGL

Query:  KHS
        KHS
Subjt:  KHS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G34630.1 unknown protein8.3e-1556.63Show/hide
Query:  GFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLK
        G  YG     ++  D  ++D + +D  DLD+ELVP SVS K+GRQRMRKLGKR   ++Y SK SPFL  KPG VRGKHGLG+K
Subjt:  GFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLK

AT5G48420.1 unknown protein8.6e-0444.44Show/hide
Query:  DKDDDDD-DDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFT--KPGCVRGKHGLGLK
        D D++DD D  D+LD D ELV          QR+RK GKR F +    K+  + ++  KPGCV GKHGL +K
Subjt:  DKDDDDD-DDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFT--KPGCVRGKHGLGLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCCATGTCTGGAGCTTCGTCATCATCTTCTTCTTCTTCCTCATCGTCTGTGGAATTCCATTTTTACGATGATTTCGAGTATGAATTTGTTGAAGATGTTGAACG
CCTTTCGAACTGGGAGTTCCTCAATGCTTCTGATGCCGATTCAGAAATGGACGGAAATGGAGGCGAAAAAGAGGGTAAAAACTGCTGCGTCGTTGCTCGAATTCCTGAAG
ATCTCCGAGAAATGATTTCTCCTGTTGTTGTGGTGCCGATTTCTCTTGCGGCGGAGGATCGGATCTTTGATCCTTTGGAAGATGTTTATTTCCTTCAGAATCACGCGGAG
GACGGTTTTGCGTACGGTTACAACGATGCGGAGGAGAATGAAACTGACAAAGACGACGACGACGATGATGATGAAGATGAGTTAGATTTGGACGATGAACTCGTTCCGTG
GTCTGTCAGTGACAAACTCGGACGGCAGCGGATGAGGAAATTGGGGAAAAGAGGATTTACGAGGATGTATAATTCGAAGAGATCGCCGTTTTTGTTCACCAAGCCTGGAT
GCGTCCGCGGCAAGCACGGACTCGGCTTGAAGCATAGTTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCCATGTCTGGAGCTTCGTCATCATCTTCTTCTTCTTCCTCATCGTCTGTGGAATTCCATTTTTACGATGATTTCGAGTATGAATTTGTTGAAGATGTTGAACG
CCTTTCGAACTGGGAGTTCCTCAATGCTTCTGATGCCGATTCAGAAATGGACGGAAATGGAGGCGAAAAAGAGGGTAAAAACTGCTGCGTCGTTGCTCGAATTCCTGAAG
ATCTCCGAGAAATGATTTCTCCTGTTGTTGTGGTGCCGATTTCTCTTGCGGCGGAGGATCGGATCTTTGATCCTTTGGAAGATGTTTATTTCCTTCAGAATCACGCGGAG
GACGGTTTTGCGTACGGTTACAACGATGCGGAGGAGAATGAAACTGACAAAGACGACGACGACGATGATGATGAAGATGAGTTAGATTTGGACGATGAACTCGTTCCGTG
GTCTGTCAGTGACAAACTCGGACGGCAGCGGATGAGGAAATTGGGGAAAAGAGGATTTACGAGGATGTATAATTCGAAGAGATCGCCGTTTTTGTTCACCAAGCCTGGAT
GCGTCCGCGGCAAGCACGGACTCGGCTTGAAGCATAGTTATTAG
Protein sequenceShow/hide protein sequence
MEAMSGASSSSSSSSSSSVEFHFYDDFEYEFVEDVERLSNWEFLNASDADSEMDGNGGEKEGKNCCVVARIPEDLREMISPVVVVPISLAAEDRIFDPLEDVYFLQNHAE
DGFAYGYNDAEENETDKDDDDDDDEDELDLDDELVPWSVSDKLGRQRMRKLGKRGFTRMYNSKRSPFLFTKPGCVRGKHGLGLKHSY