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Carg19403 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19403
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor bHLH63-like
Genome locationCarg_Chr19:6820179..6820730
RNA-Seq ExpressionCarg19403
SyntenyCarg19403
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572048.1 Transcription factor basic helix-loop-helix 63, partial [Cucurbita argyrosperma subsp. sororia]8.4e-88100Show/hide
Query:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDPGLGGK
        MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDPGLGGK
Subjt:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDPGLGGK

Query:  FDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNK
        FDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNK
Subjt:  FDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNK

KAG7011714.1 hypothetical protein SDJN02_26620, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-97100Show/hide
Query:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDPGLGGK
        MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDPGLGGK
Subjt:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDPGLGGK

Query:  FDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNKASSYNMNSLFFKTFLH
        FDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNKASSYNMNSLFFKTFLH
Subjt:  FDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNKASSYNMNSLFFKTFLH

XP_022953115.1 transcription factor bHLH78-like isoform X1 [Cucurbita moschata]3.9e-8598.21Show/hide
Query:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDP-GLGG
        MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFP FMSGGGSGGGMSLVE+VMGAVKPDP GLGG
Subjt:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDP-GLGG

Query:  KFDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNK
        KFDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNK
Subjt:  KFDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNK

XP_022953116.1 transcription factor HBI1-like isoform X2 [Cucurbita moschata]3.9e-8598.21Show/hide
Query:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDP-GLGG
        MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFP FMSGGGSGGGMSLVE+VMGAVKPDP GLGG
Subjt:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDP-GLGG

Query:  KFDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNK
        KFDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNK
Subjt:  KFDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNK

XP_022975196.1 transcription factor bHLH63-like [Cucurbita maxima]3.2e-7987.78Show/hide
Query:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDPGLGGK
        MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFP FMSGGGSGGGMSLVEMVMGAVKPDPGLGGK
Subjt:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDPGLGGK

Query:  FDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNKASSYNMNSLFFKT
        FDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAA RESFKKRKAEKVHTT       AAPTNN       N      KT
Subjt:  FDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNKASSYNMNSLFFKT

TrEMBL top hitse value%identityAlignment
A0A1S3BJH6 transcription factor bHLH49-like3.5e-5568.06Show/hide
Query:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQ----QSCFNRVDYGGGFPPPGVVPADHLTGFPRFMS-GGGSGGGMSLVEMVMGAVKPDP
        MNRALPEML CLNT G+C D LSVLERQR RLK+QQDQL Q    QSCFNR DYGGGFPPP  VP DHLTGFP +MS GGG GGG++ VEMVMGAVKPDP
Subjt:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQ----QSCFNRVDYGGGFPPPGVVPADHLTGFPRFMS-GGGSGGGMSLVEMVMGAVKPDP

Query:  GLG------GKFDPSLLLNATAYELNSSLSRTSSCPPAVTPAV-----SAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNKASSYNMNS
        GL       GKFDPSLLLNATA ELNSSLSRTSSC P V P       S A RESFKKRKAEK H TTTT       +NNK        NS
Subjt:  GLG------GKFDPSLLLNATAYELNSSLSRTSSCPPAVTPAV-----SAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNKASSYNMNS

A0A5D3DFI8 Transcription factor bHLH49-like9.1e-5668.62Show/hide
Query:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQ----QSCFNRVDYGGGFPPPGVVPADHLTGFPRFMS-GGGSGGGMSLVEMVMGAVKPDP
        MNRALPEML CLNT G+C D LSVLERQR RLK+QQDQL Q    QSCFNR DYGGGFPPP  VP DHLTGFP +MS GGG GGG++ VEMVMGAVKPDP
Subjt:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQ----QSCFNRVDYGGGFPPPGVVPADHLTGFPRFMS-GGGSGGGMSLVEMVMGAVKPDP

Query:  GLG------GKFDPSLLLNATAYELNSSLSRTSSCPPAVTPAV-----SAARRESFKKRKAEKVHTTTTTTTA--AAAPTNNKNKASS
        GL       GKFDPSLLLNATA ELNSSLSRTSSC P V P       S A RESFKKRKAEK H TTTT  +   A  T+ +N  +S
Subjt:  GLG------GKFDPSLLLNATAYELNSSLSRTSSCPPAVTPAV-----SAARRESFKKRKAEKVHTTTTTTTA--AAAPTNNKNKASS

A0A6J1GM38 transcription factor HBI1-like isoform X21.9e-8598.21Show/hide
Query:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDP-GLGG
        MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFP FMSGGGSGGGMSLVE+VMGAVKPDP GLGG
Subjt:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDP-GLGG

Query:  KFDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNK
        KFDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNK
Subjt:  KFDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNK

A0A6J1GNS0 transcription factor bHLH78-like isoform X11.9e-8598.21Show/hide
Query:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDP-GLGG
        MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFP FMSGGGSGGGMSLVE+VMGAVKPDP GLGG
Subjt:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDP-GLGG

Query:  KFDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNK
        KFDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNK
Subjt:  KFDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNK

A0A6J1IK51 transcription factor bHLH63-like1.5e-7987.78Show/hide
Query:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDPGLGGK
        MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFP FMSGGGSGGGMSLVEMVMGAVKPDPGLGGK
Subjt:  MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDPGLGGK

Query:  FDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNKASSYNMNSLFFKT
        FDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAA RESFKKRKAEKVHTT       AAPTNN       N      KT
Subjt:  FDPSLLLNATAYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNKASSYNMNSLFFKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAGAGCATTGCCGGAGATGTTGCAGTGTTTGAACACTGCGGGGGACTGTCCTGATAATCTCAGTGTTCTTGAGAGGCAGAGGGGTCGTTTGAAATTCCAGCAAGA
TCAGCTTTTGCAGCAGAGCTGTTTCAATAGGGTTGATTACGGCGGCGGATTTCCGCCGCCGGGGGTTGTTCCGGCGGATCACCTCACGGGGTTTCCGCGGTTCATGAGTG
GCGGTGGCAGCGGTGGTGGGATGTCACTTGTTGAGATGGTAATGGGGGCAGTGAAGCCTGACCCTGGGTTAGGAGGCAAGTTTGATCCCTCTCTGTTGTTGAATGCCACG
GCTTATGAACTCAATTCTTCTCTCTCGAGAACCTCCAGCTGCCCGCCGGCAGTGACTCCGGCTGTGTCGGCCGCCAGAAGAGAGAGCTTCAAGAAAAGAAAAGCTGAGAA
AGTTCACACCACCACCACCACAACCACCGCTGCCGCCGCCCCCACCAACAACAAGAACAAGGCAAGTTCGTATAACATGAACTCTCTCTTTTTCAAAACATTCCTCCATT
GA
mRNA sequenceShow/hide mRNA sequence
ATGAACAGAGCATTGCCGGAGATGTTGCAGTGTTTGAACACTGCGGGGGACTGTCCTGATAATCTCAGTGTTCTTGAGAGGCAGAGGGGTCGTTTGAAATTCCAGCAAGA
TCAGCTTTTGCAGCAGAGCTGTTTCAATAGGGTTGATTACGGCGGCGGATTTCCGCCGCCGGGGGTTGTTCCGGCGGATCACCTCACGGGGTTTCCGCGGTTCATGAGTG
GCGGTGGCAGCGGTGGTGGGATGTCACTTGTTGAGATGGTAATGGGGGCAGTGAAGCCTGACCCTGGGTTAGGAGGCAAGTTTGATCCCTCTCTGTTGTTGAATGCCACG
GCTTATGAACTCAATTCTTCTCTCTCGAGAACCTCCAGCTGCCCGCCGGCAGTGACTCCGGCTGTGTCGGCCGCCAGAAGAGAGAGCTTCAAGAAAAGAAAAGCTGAGAA
AGTTCACACCACCACCACCACAACCACCGCTGCCGCCGCCCCCACCAACAACAAGAACAAGGCAAGTTCGTATAACATGAACTCTCTCTTTTTCAAAACATTCCTCCATT
GA
Protein sequenceShow/hide protein sequence
MNRALPEMLQCLNTAGDCPDNLSVLERQRGRLKFQQDQLLQQSCFNRVDYGGGFPPPGVVPADHLTGFPRFMSGGGSGGGMSLVEMVMGAVKPDPGLGGKFDPSLLLNAT
AYELNSSLSRTSSCPPAVTPAVSAARRESFKKRKAEKVHTTTTTTTAAAAPTNNKNKASSYNMNSLFFKTFLH