CuGenDBv2

Gene ID	Carg19437
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Genome location	Carg_Chr16:10153135..10156779
RNA-Seq Expression	Carg19437
Synteny	Carg19437
Gene Ontology terms	GO:0048767 - root hair elongation (biological process) GO:0071816 - tail-anchored membrane protein insertion into ER membrane (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0043529 - GET complex (cellular component) GO:0043621 - protein self-association (molecular function)
InterPro domains	IPR028945 - Get1 family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008448478.1 PREDICTED: uncharacterized protein LOC103490650 [Cucumis melo]

8.8e-82

89.94

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Query:  MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
        ME EAEGIVEH SSIAAP IF +VI FQFLARWLEHLKKGGSNSQVE+ELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
Subjt:  MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT

Query:  SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR
        SYGLYS+VLLISKV +YI L+ WFWR SVATVPHHLVQPFG+ LSWKAGG VNDYVKVGIIPWLILSTRVSKFVCQVV+
Subjt:  SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR

XP_022145254.1 uncharacterized protein LOC111014752 [Momordica charantia]

1.7e-77

85.39

Show/hide

Query:  MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
        MEAEAEGIVEHRSS AAP IFLVVI FQFLARWLE  K+ GSN+ VEMELRKSIKQLL+EAS LSQPSTFAQAAKLRRLAAAKEKELANYQESR+KE+KT
Subjt:  MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT

Query:  SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVV
        SYGLYS+VLL SKV +YIAL+ WFWR SVATVPHHLVQPFG++LSW+AGG VNDYVKVG+IPWLILSTRVSK+VCQVV
Subjt:  SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVV

XP_022923433.1 uncharacterized protein LOC111431128 [Cucurbita moschata]

2.7e-91

100

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Query:  MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
        MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
Subjt:  MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT

Query:  SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR
        SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR
Subjt:  SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR

XP_023007643.1 uncharacterized protein LOC111500212 [Cucurbita maxima]

5.1e-90

98.31

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Query:  EAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTS
        EAEAEGIVEHRSSIAAPCIFL+VIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTS
Subjt:  EAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTS

Query:  YGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR
        YGLYSRVLLISKVFMYI L+FWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR
Subjt:  YGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR

XP_023552250.1 uncharacterized protein LOC111809975 [Cucurbita pepo subsp. pepo]

3.9e-90

97.77

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Query:  MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
        MEAEAEGIVEHRSS+AAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
Subjt:  MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT

Query:  SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR
        SYGLYSRVLLISKVFMYIAL+FWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSK+VC+VVR
Subjt:  SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BKE1 uncharacterized protein LOC103490650

4.3e-82

89.94

Show/hide

Query:  MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
        ME EAEGIVEH SSIAAP IF +VI FQFLARWLEHLKKGGSNSQVE+ELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
Subjt:  MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT

Query:  SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR
        SYGLYS+VLLISKV +YI L+ WFWR SVATVPHHLVQPFG+ LSWKAGG VNDYVKVGIIPWLILSTRVSKFVCQVV+
Subjt:  SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR

A0A6J1CUP1 uncharacterized protein LOC111014752

8.3e-78

85.39

Show/hide

Query:  MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
        MEAEAEGIVEHRSS AAP IFLVVI FQFLARWLE  K+ GSN+ VEMELRKSIKQLL+EAS LSQPSTFAQAAKLRRLAAAKEKELANYQESR+KE+KT
Subjt:  MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT

Query:  SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVV
        SYGLYS+VLL SKV +YIAL+ WFWR SVATVPHHLVQPFG++LSW+AGG VNDYVKVG+IPWLILSTRVSK+VCQVV
Subjt:  SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVV

A0A6J1E9M6 uncharacterized protein LOC111431128

1.3e-91

100

Show/hide

Query:  MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
        MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT
Subjt:  MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKT

Query:  SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR
        SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR
Subjt:  SYGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR

A0A6J1I7A9 uncharacterized protein LOC111470261

2.4e-77

87.36

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Query:  EAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYG
        EAE IVEHR+SI AP IFL+VIAFQFLA WL+HLKK GSN+QVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESR+K++K+SYG
Subjt:  EAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYG

Query:  LYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQV
        LYSRVLLISKV +YI L+ WFWR SVATVPHHLVQPFGR LSW+AGGIVNDYVKVGIIPWLILSTRVSKFVC+V
Subjt:  LYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQV

A0A6J1L884 uncharacterized protein LOC111500212

2.5e-90

98.31

Show/hide

Query:  EAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTS
        EAEAEGIVEHRSSIAAPCIFL+VIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTS
Subjt:  EAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTS

Query:  YGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR
        YGLYSRVLLISKVFMYI L+FWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR
Subjt:  YGLYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR

SwissProt top hits

e value

%identity

Alignment

Q1H5D2 Protein GET1

2.4e-50

59.43

Show/hide

Query:  EAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYG
        E E ++E R  +AAP  F+VV+ FQ L++WL+ LKK GS +  E ELR  IKQLLREAS LSQP+TFAQAAKLRR AA KEKELA Y E  +KEIK SY 
Subjt:  EAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYG

Query:  LYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVV
        +Y + LL SKV +Y+ L+  FWR  +A +   LVQPFG +LSW  GG +  +V VGIIPWLILS RVSK+VC+ V
Subjt:  LYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVV

Arabidopsis top hits

e value

%identity

Alignment

AT4G16444.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CHD5-like protein (InterPro:IPR007514); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

1.7e-51

59.43

Show/hide

Query:  EAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYG
        E E ++E R  +AAP  F+VV+ FQ L++WL+ LKK GS +  E ELR  IKQLLREAS LSQP+TFAQAAKLRR AA KEKELA Y E  +KEIK SY 
Subjt:  EAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYG

Query:  LYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVV
        +Y + LL SKV +Y+ L+  FWR  +A +   LVQPFG +LSW  GG +  +V VGIIPWLILS RVSK+VC+ V
Subjt:  LYSRVLLISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAGCGGAAGCGGAAGGAATCGTAGAGCATCGAAGCTCGATAGCGGCTCCATGCATTTTCTTGGTCGTTATCGCTTTTCAATTTCTCGCTAGATGGCTGGAGCACCT
GAAGAAGGGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACTTCTGAGGGAGGCAAGCACCTTATCGCAACCATCTACATTTGCACAGGCTG
CAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAACTATCAAGAATCACGTAATAAGGAGATAAAGACATCCTATGGTTTATACAGTCGAGTACTGTTG
ATATCAAAGGTTTTTATGTATATTGCGCTGATCTTCTGGTTTTGGAGAGTTTCTGTTGCAACTGTACCTCATCACCTTGTGCAGCCATTCGGAAGAGTTTTATCTTGGAA
GGCTGGAGGTATCGTAAATGATTATGTGAAGGTTGGAATTATACCTTGGTTGATACTGTCGACACGGGTTAGCAAATTTGTATGTCAGGTTGTCCGCTGA

mRNA sequence

Show/hide mRNA sequence

AGTTTTCTGGTTCGATTAATTCACTGTGGTGGCACAAAAATCCTCCGGAAATGGAAGCGGAAGCGGAAGGAATCGTAGAGCATCGAAGCTCGATAGCGGCTCCATGCATT
TTCTTGGTCGTTATCGCTTTTCAATTTCTCGCTAGATGGCTGGAGCACCTGAAGAAGGGAGGTTCCAACAGCCAGGTGGAAATGGAGTTGCGCAAATCAATAAAGCAACT
TCTGAGGGAGGCAAGCACCTTATCGCAACCATCTACATTTGCACAGGCTGCAAAACTTCGGAGGTTGGCAGCCGCTAAGGAGAAGGAGCTGGCAAACTATCAAGAATCAC
GTAATAAGGAGATAAAGACATCCTATGGTTTATACAGTCGAGTACTGTTGATATCAAAGGTTTTTATGTATATTGCGCTGATCTTCTGGTTTTGGAGAGTTTCTGTTGCA
ACTGTACCTCATCACCTTGTGCAGCCATTCGGAAGAGTTTTATCTTGGAAGGCTGGAGGTATCGTAAATGATTATGTGAAGGTTGGAATTATACCTTGGTTGATACTGTC
GACACGGGTTAGCAAATTTGTATGTCAGGTTGTCCGCTGA

Protein sequence

Show/hide protein sequence

MEAEAEGIVEHRSSIAAPCIFLVVIAFQFLARWLEHLKKGGSNSQVEMELRKSIKQLLREASTLSQPSTFAQAAKLRRLAAAKEKELANYQESRNKEIKTSYGLYSRVLL
ISKVFMYIALIFWFWRVSVATVPHHLVQPFGRVLSWKAGGIVNDYVKVGIIPWLILSTRVSKFVCQVVR

Carg19437 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome