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Carg19440 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19440
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDUF4378 domain-containing protein
Genome locationCarg_Chr16:10137184..10138728
RNA-Seq ExpressionCarg19440
SyntenyCarg19440
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015850.1 hypothetical protein SDJN02_23488, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-39100Show/hide
Query:  MEMEFHNSMLIDGTAVRRWENHADGNTLRRRNLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNANECQLLS
        MEMEFHNSMLIDGTAVRRWENHADGNTLRRRNLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNANECQLLS
Subjt:  MEMEFHNSMLIDGTAVRRWENHADGNTLRRRNLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNANECQLLS

XP_038904709.1 uncharacterized protein LOC120091008 isoform X1 [Benincasa hispida]6.0e-1251.65Show/hide
Query:  EMEFHNSMLIDGTAVRRWENHADGNTLRRR------NLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNANECQLLS
        +M+ ++S   +     RW +        RR       LQK KKEFEAWQAARFRECSRVIE+SS+NR SLAQ++L K+ MALNAN  ++LS
Subjt:  EMEFHNSMLIDGTAVRRWENHADGNTLRRR------NLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNANECQLLS

XP_038904710.1 uncharacterized protein LOC120091008 isoform X2 [Benincasa hispida]6.0e-1251.65Show/hide
Query:  EMEFHNSMLIDGTAVRRWENHADGNTLRRR------NLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNANECQLLS
        +M+ ++S   +     RW +        RR       LQK KKEFEAWQAARFRECSRVIE+SS+NR SLAQ++L K+ MALNAN  ++LS
Subjt:  EMEFHNSMLIDGTAVRRWENHADGNTLRRR------NLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNANECQLLS

XP_038904711.1 uncharacterized protein LOC120091008 isoform X3 [Benincasa hispida]6.0e-1251.65Show/hide
Query:  EMEFHNSMLIDGTAVRRWENHADGNTLRRR------NLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNANECQLLS
        +M+ ++S   +     RW +        RR       LQK KKEFEAWQAARFRECSRVIE+SS+NR SLAQ++L K+ MALNAN  ++LS
Subjt:  EMEFHNSMLIDGTAVRRWENHADGNTLRRR------NLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNANECQLLS

XP_038904712.1 uncharacterized protein LOC120091008 isoform X4 [Benincasa hispida]6.0e-1251.65Show/hide
Query:  EMEFHNSMLIDGTAVRRWENHADGNTLRRR------NLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNANECQLLS
        +M+ ++S   +     RW +        RR       LQK KKEFEAWQAARFRECSRVIE+SS+NR SLAQ++L K+ MALNAN  ++LS
Subjt:  EMEFHNSMLIDGTAVRRWENHADGNTLRRR------NLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNANECQLLS

TrEMBL top hitse value%identityAlignment
A0A0A0L638 DUF4378 domain-containing protein4.2e-1173.08Show/hide
Query:  RRRNLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNAN
        +   LQK KKEFEAWQAARFRECSRVIE+SS+NR S+AQENL K+ +A+NAN
Subjt:  RRRNLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNAN

A0A1S3BKM8 uncharacterized protein LOC1034906517.9e-1069.23Show/hide
Query:  RRRNLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNAN
        +   LQK KKEFEAWQAARFRECSRVIE+SS+NR SL QE+L K+ + +NAN
Subjt:  RRRNLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNAN

A0A2I4H7C1 uncharacterized protein LOC109014141 isoform X14.4e-0850.59Show/hide
Query:  MEMEFHNSMLIDGTAVRRWENHADGNTLRRR------NLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNA
        M MEF+ S      +  RW +       RRR       LQK KKEFEAWQAARF+ECSRVIE+ S+    LAQE+L K+ MAL A
Subjt:  MEMEFHNSMLIDGTAVRRWENHADGNTLRRR------NLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNA

A0A5D3CJM8 RB1-inducible coiled-coil protein 1, putative isoform 17.9e-1069.23Show/hide
Query:  RRRNLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNAN
        +   LQK KKEFEAWQAARFRECSRVIE+SS+NR SL QE+L K+ + +NAN
Subjt:  RRRNLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNAN

A0A6J1F7W2 uncharacterized protein LOC1114429054.4e-0848.91Show/hide
Query:  EMEFHNSMLIDGTAVRRWENHAD--GNTLRRRN-----LQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNANECQLLS
        +M+ H+S   +     RW + +   G   RR +     LQK KKEFEAWQAARFRECSRVIE SS+NR SLAQ +   K M LN N  ++ S
Subjt:  EMEFHNSMLIDGTAVRRWENHAD--GNTLRRRN-----LQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNANECQLLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGGAATTTCATAACTCTATGCTGATCGATGGAACAGCGGTCAGAAGATGGGAAAATCACGCCGACGGGAACACCCTCAGGAGGAGGAATTTACAAAAGTTGAA
GAAGGAATTTGAAGCATGGCAGGCTGCAAGGTTTAGGGAGTGTTCAAGGGTTATTGAAATTAGTAGCATGAATAGACTGTCACTTGCTCAGGAAAACCTTGTCAAGAAGA
TGATGGCACTAAATGCAAACGAGTGCCAACTGTTATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGGAATTTCATAACTCTATGCTGATCGATGGAACAGCGGTCAGAAGATGGGAAAATCACGCCGACGGGAACACCCTCAGGAGGAGGAATTTACAAAAGTTGAA
GAAGGAATTTGAAGCATGGCAGGCTGCAAGGTTTAGGGAGTGTTCAAGGGTTATTGAAATTAGTAGCATGAATAGACTGTCACTTGCTCAGGAAAACCTTGTCAAGAAGA
TGATGGCACTAAATGCAAACGAGTGCCAACTGTTATCATGA
Protein sequenceShow/hide protein sequence
MEMEFHNSMLIDGTAVRRWENHADGNTLRRRNLQKLKKEFEAWQAARFRECSRVIEISSMNRLSLAQENLVKKMMALNANECQLLS