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Carg19453 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19453
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr16:10055551..10056713
RNA-Seq ExpressionCarg19453
SyntenyCarg19453
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577798.1 DNA-directed RNA polymerase II subunit rpb1, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1478.57Show/hide
Query:  APSFLNLDSERGVVFKSPPEREEANKRPNTPRHVARNGHIISSSLSQACLFFALKN
        AP +    + +  VFKSPPEREE NKRPNTPRHVARNGHIISSSLSQACLFFALKN
Subjt:  APSFLNLDSERGVVFKSPPEREEANKRPNTPRHVARNGHIISSSLSQACLFFALKN
KAG7015838.1 hypothetical protein SDJN02_23476, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-70100Show/hide
Query:  MDFSSLMPAPSFLNLDSERGVVFKSPPEREEANKRPNTPRHVARNGHIISSSLSQACLFFALKNFLICNSMHSITPHDRTPHDNVFVIVSVENISCNVHT
        MDFSSLMPAPSFLNLDSERGVVFKSPPEREEANKRPNTPRHVARNGHIISSSLSQACLFFALKNFLICNSMHSITPHDRTPHDNVFVIVSVENISCNVHT
Subjt:  MDFSSLMPAPSFLNLDSERGVVFKSPPEREEANKRPNTPRHVARNGHIISSSLSQACLFFALKNFLICNSMHSITPHDRTPHDNVFVIVSVENISCNVHT

Query:  TSESKIDEQVSSCHCSSLRHSRLQHKEMCSNGWV
        TSESKIDEQVSSCHCSSLRHSRLQHKEMCSNGWV
Subjt:  TSESKIDEQVSSCHCSSLRHSRLQHKEMCSNGWV
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCTCTTCTCTGATGCCTGCGCCATCATTTCTGAATCTGGACTCGGAAAGGGGTGTTGTCTTCAAGTCTCCTCCAGAACGGGAAGAGGCAAATAAACGACCGAA
CACACCGCGGCATGTTGCTCGGAATGGACACATTATATCATCTAGCCTTTCGCAAGCTTGTTTATTTTTTGCTTTGAAGAACTTCCTGATATGCAATTCCATGCATTCCA
TAACACCTCACGATCGCACTCCACACGATAACGTTTTTGTCATTGTTTCGGTTGAAAACATCTCTTGCAATGTTCACACAACATCTGAGTCGAAAATCGATGAACAAGTT
TCCTCTTGTCACTGTTCTTCATTGCGCCATAGCCGCCTTCAACACAAAGAAATGTGTAGCAATGGGTGGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCTCTTCTCTGATGCCTGCGCCATCATTTCTGAATCTGGACTCGGAAAGGGGTGTTGTCTTCAAGTCTCCTCCAGAACGGGAAGAGGCAAATAAACGACCGAA
CACACCGCGGCATGTTGCTCGGAATGGACACATTATATCATCTAGCCTTTCGCAAGCTTGTTTATTTTTTGCTTTGAAGAACTTCCTGATATGCAATTCCATGCATTCCA
TAACACCTCACGATCGCACTCCACACGATAACGTTTTTGTCATTGTTTCGGTTGAAAACATCTCTTGCAATGTTCACACAACATCTGAGTCGAAAATCGATGAACAAGTT
TCCTCTTGTCACTGTTCTTCATTGCGCCATAGCCGCCTTCAACACAAAGAAATGTGTAGCAATGGGTGGGTGTGA
Protein sequenceShow/hide protein sequence
MDFSSLMPAPSFLNLDSERGVVFKSPPEREEANKRPNTPRHVARNGHIISSSLSQACLFFALKNFLICNSMHSITPHDRTPHDNVFVIVSVENISCNVHTTSESKIDEQV
SSCHCSSLRHSRLQHKEMCSNGWV