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Carg19465 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19465
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionrac-like GTP-binding protein ARAC1
Genome locationCarg_Chr16:9985899..9988290
RNA-Seq ExpressionCarg19465
SyntenyCarg19465
Gene Ontology termsGO:0007264 - small GTPase mediated signal transduction (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR003578 - Small GTPase Rho
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1830488.1 unnamed protein product [Ananas comosus var. bracteatus]1.5e-4262.5Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------LDLRDDKQFFIDHPGAVP
        MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPT                                                 LDLRDDKQFFIDHPGAVP
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------LDLRDDKQFFIDHPGAVP

Query:  ISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
        I+TAQGEEL+KLIGAP YIECSSKTQQN+K VFDAAIKVVLQPPKQKKKK K Q+ C IL
Subjt:  ISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

GAU34212.1 hypothetical protein TSUD_209940 [Trifolium subterraneum]2.2e-4363.69Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT----------------------------------------------LDLRDDKQFFIDHPGAVPIST
        MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT                                              LDLRDDKQFF+DHPGAVPI+T
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT----------------------------------------------LDLRDDKQFFIDHPGAVPIST

Query:  AQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
        AQGEEL+KLI AP YIECSSK+Q+NVKGVFD+AIKVVLQPPKQKKKK+K Q+ACSIL
Subjt:  AQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

KAF3786117.1 Rac-like GTP-binding protein [Nymphaea thermarum]8.5e-4374.24Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT--------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNV
        MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPT                    LDLRDDKQF  DHPGAVPI+TAQGEEL+K+IGAP YIECSSKTQQNV
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT--------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNV

Query:  KGVFDAAIKVVLQPPKQ-KKKKAKGQRACSIL
        K VFDAAIKVVLQPPKQ KKKK K Q+ C IL
Subjt:  KGVFDAAIKVVLQPPKQ-KKKKAKGQRACSIL

KAG7015826.1 Rac-like GTP-binding protein 7, partial [Cucurbita argyrosperma subsp. argyrosperma]7.4e-55100Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTLDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKK
        MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTLDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKK
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTLDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKK

Query:  KAKGQRACSIL
        KAKGQRACSIL
Subjt:  KAKGQRACSIL

XP_022923192.1 rac-like GTP-binding protein ARAC1 [Cucurbita moschata]1.3e-4356.35Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------
        MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT                                                                   
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------

Query:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
                           LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
Subjt:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

TrEMBL top hitse value%identityAlignment
A0A2Z6LT86 Uncharacterized protein1.2e-4264.1Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT---------------------------------------------LDLRDDKQFFIDHPGAVPISTA
        MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT                                              DLRDDKQF IDHPGAVPI+TA
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT---------------------------------------------LDLRDDKQFFIDHPGAVPISTA

Query:  QGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
        QGEEL+KLI AP YIECSSK+Q+NVKGVFDAAI+VVLQPPKQKKKK KGQ+ACSIL
Subjt:  QGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

A0A2Z6NC56 Uncharacterized protein1.1e-4363.69Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT----------------------------------------------LDLRDDKQFFIDHPGAVPIST
        MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT                                              LDLRDDKQFF+DHPGAVPI+T
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT----------------------------------------------LDLRDDKQFFIDHPGAVPIST

Query:  AQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
        AQGEEL+KLI AP YIECSSK+Q+NVKGVFD+AIKVVLQPPKQKKKK+K Q+ACSIL
Subjt:  AQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

A0A6J1E8W2 rac-like GTP-binding protein ARAC16.4e-4456.35Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------
        MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT                                                                   
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------

Query:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
                           LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
Subjt:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

A0A6J1HQI8 rac-like GTP-binding protein ARAC16.4e-4456.35Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------
        MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT                                                                   
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------

Query:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
                           LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
Subjt:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

A0A6V7PIM0 Uncharacterized protein7.0e-4362.5Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------LDLRDDKQFFIDHPGAVP
        MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPT                                                 LDLRDDKQFFIDHPGAVP
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------LDLRDDKQFFIDHPGAVP

Query:  ISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
        I+TAQGEEL+KLIGAP YIECSSKTQQN+K VFDAAIKVVLQPPKQKKKK K Q+ C IL
Subjt:  ISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

SwissProt top hitse value%identityAlignment
P92978 Rac-like GTP-binding protein ARAC112.2e-4150.76Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------
        MSASRF+KCVTVGDGAVGKTCLLISYTSNTFPT                                                                   
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------

Query:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
                           LDLRDDKQFFIDHPGAVPI+TAQGEEL+K IGAP YIECSSKTQ+NVK VFDAAI+VVLQPPKQKKKK+K Q+ACSIL
Subjt:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

Q35638 Rac-like GTP-binding protein RHO12.8e-4150.76Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------
        MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT                                                                   
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------

Query:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
                           LDLRDDKQFF+DHPGAVPI+TAQGEEL+KLI AP YIECSSK+QQNVK VFDAAI+VVLQPPKQKKKK+K Q+ACSIL
Subjt:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

Q38902 Rac-like GTP-binding protein ARAC16.8e-4352.28Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------
        MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT                                                                   
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------

Query:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
                           LDLRDDKQFFIDHPGAVPI+TAQGEEL+KLIGAP YIECSSKTQ+NVKGVFDAAI+VVLQPPKQKKKK+K Q+ACSIL
Subjt:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

Q39435 Rac-like GTP-binding protein RHO13.4e-4252.28Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------
        MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT                                                                   
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------

Query:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
                           LDLRDDKQFFIDHPGAVPI+TAQGEEL+KLIGAP YIECSSKTQQNVK VFDAAIKVVLQPPK KKKK+K Q+ACSIL
Subjt:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

Q9SBJ6 Rac-like GTP-binding protein ARAC61.3e-4151.27Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------
        MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT                                                                   
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------

Query:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
                           LDLRDDKQFFIDHPGAVPI+T QGEEL+KLIGAP YIECSSK+Q+NVKGVFDAAI+VVLQPPKQKKKK K Q+ACSIL
Subjt:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

Arabidopsis top hitse value%identityAlignment
AT2G17800.1 Arabidopsis RAC-like 14.8e-4452.28Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------
        MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT                                                                   
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------

Query:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
                           LDLRDDKQFFIDHPGAVPI+TAQGEEL+KLIGAP YIECSSKTQ+NVKGVFDAAI+VVLQPPKQKKKK+K Q+ACSIL
Subjt:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

AT2G17800.2 Arabidopsis RAC-like 14.8e-4452.28Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------
        MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT                                                                   
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------

Query:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
                           LDLRDDKQFFIDHPGAVPI+TAQGEEL+KLIGAP YIECSSKTQ+NVKGVFDAAI+VVLQPPKQKKKK+K Q+ACSIL
Subjt:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

AT3G51300.1 RHO-related protein from plants 11.5e-4250.76Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------
        MSASRF+KCVTVGDGAVGKTCLLISYTSNTFPT                                                                   
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------

Query:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
                           LDLRDDKQFFIDHPGAVPI+TAQGEEL+K IGAP YIECSSKTQ+NVK VFDAAI+VVLQPPKQKKKK+K Q+ACSIL
Subjt:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL

AT4G35020.1 RAC-like 31.9e-4050.51Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------
        MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT                                                                   
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------

Query:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPK-QKKKKAKGQRACSIL
                           LDLRDDKQFF +HPGAVPISTAQGEEL+KLIGAP YIECS+KTQQNVK VFDAAIKVVLQPPK +KKKK K Q+ CSIL
Subjt:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPK-QKKKKAKGQRACSIL

AT4G35950.1 RAC-like 69.1e-4351.27Show/hide
Query:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------
        MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT                                                                   
Subjt:  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT-------------------------------------------------------------------

Query:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL
                           LDLRDDKQFFIDHPGAVPI+T QGEEL+KLIGAP YIECSSK+Q+NVKGVFDAAI+VVLQPPKQKKKK K Q+ACSIL
Subjt:  -------------------LDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGCTTCAAGGTTCATCAAGTGCGTCACCGTTGGAGACGGAGCTGTTGGCAAGACTTGTCTCCTTATCTCCTATACCAGCAACACCTTCCCCACTCTAGATCTTCG
AGATGATAAGCAGTTCTTTATTGACCATCCTGGCGCAGTTCCTATTTCAACAGCTCAGGGCGAGGAGCTTCAAAAGCTGATTGGTGCTCCTGAATACATTGAATGCAGCT
CAAAAACTCAGCAGAATGTGAAGGGAGTTTTTGATGCAGCAATTAAGGTTGTACTTCAACCTCCAAAGCAGAAGAAAAAGAAGGCCAAAGGTCAGAGAGCGTGCTCGATA
TTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGCTTCAAGGTTCATCAAGTGCGTCACCGTTGGAGACGGAGCTGTTGGCAAGACTTGTCTCCTTATCTCCTATACCAGCAACACCTTCCCCACTCTAGATCTTCG
AGATGATAAGCAGTTCTTTATTGACCATCCTGGCGCAGTTCCTATTTCAACAGCTCAGGGCGAGGAGCTTCAAAAGCTGATTGGTGCTCCTGAATACATTGAATGCAGCT
CAAAAACTCAGCAGAATGTGAAGGGAGTTTTTGATGCAGCAATTAAGGTTGTACTTCAACCTCCAAAGCAGAAGAAAAAGAAGGCCAAAGGTCAGAGAGCGTGCTCGATA
TTATGA
Protein sequenceShow/hide protein sequence
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTLDLRDDKQFFIDHPGAVPISTAQGEELQKLIGAPEYIECSSKTQQNVKGVFDAAIKVVLQPPKQKKKKAKGQRACSI
L