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Carg19503 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19503
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionIBR domain containing protein
Genome locationCarg_Chr03:3855361..3855870
RNA-Seq ExpressionCarg19503
SyntenyCarg19503
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603545.1 hypothetical protein SDJN03_04154, partial [Cucurbita argyrosperma subsp. sororia]3.7e-90100Show/hide
Query:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF
        MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF
Subjt:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF

Query:  NHKRKLDLLTPPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR
        NHKRKLDLLTPPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR
Subjt:  NHKRKLDLLTPPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR

XP_008464261.1 PREDICTED: uncharacterized protein LOC103502186 [Cucumis melo]2.8e-6982.35Show/hide
Query:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF
        M+CETSDYP KSLQFK NDKFFSK+L+RESSRAN+SSRIYYGGLAGAVPFVWESQPGTP+HRFSDDLTPPLTPPPSYFS SL+KP K RSKSLSL HIFF
Subjt:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF

Query:  NHKRKLDLLT-PPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR
        N KRK DLL+ PPVSKSASLPS GS+FDSA GAKF GRRSARRF       KE E+AAASGSVLCFG+GR
Subjt:  NHKRKLDLLT-PPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR

XP_011653717.1 uncharacterized protein LOC105435254 [Cucumis sativus]8.3e-6679.41Show/hide
Query:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF
        M+CETS+YP KSLQFK NDKF SK+L+RESSRAN+SSRIYYGGLAGAVPFVWESQPGTP+HRFSDDLTPPLTPPPSYFS SL+KP K RSKSLSL HIFF
Subjt:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF

Query:  NHKRKLDLLT-PPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR
        + KRK DLL+ PPVSKS SL SSGS+FDSA GAKF GRRSARRF       KE E+AAA+ SVLCFGIGR
Subjt:  NHKRKLDLLT-PPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR

XP_022978307.1 uncharacterized protein LOC111478334 [Cucurbita maxima]1.1e-6895Show/hide
Query:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF
        MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF
Subjt:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF

Query:  NHKRKLDLLTPPVSKSASLPSSGSMFDSAVGAKFAGRRSA
        NHKRKLDLLTPPVSKSASLPSSGS FDSAVGA    R  A
Subjt:  NHKRKLDLLTPPVSKSASLPSSGSMFDSAVGAKFAGRRSA

XP_038882810.1 uncharacterized protein LOC120073955 [Benincasa hispida]4.6e-7282.84Show/hide
Query:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF
        MLCETSDYP KSLQFK NDKFFSK+L+RESSRAN+SSRIYYGGLAGAVPFVWESQPGTP+HRFSDDLTP LTPPPSYFS S++KP K RSKSLSL HI F
Subjt:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF

Query:  NHKRKLDLLTPPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR
        N KRK+DLL+PP SKSASLPSSGS FDSA GAKF GRRS RRF  G+SRSKE EDAAA+GS+LCFGI R
Subjt:  NHKRKLDLLTPPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR

TrEMBL top hitse value%identityAlignment
A0A0A0L1H9 Uncharacterized protein4.0e-6679.41Show/hide
Query:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF
        M+CETS+YP KSLQFK NDKF SK+L+RESSRAN+SSRIYYGGLAGAVPFVWESQPGTP+HRFSDDLTPPLTPPPSYFS SL+KP K RSKSLSL HIFF
Subjt:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF

Query:  NHKRKLDLLT-PPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR
        + KRK DLL+ PPVSKS SL SSGS+FDSA GAKF GRRSARRF       KE E+AAA+ SVLCFGIGR
Subjt:  NHKRKLDLLT-PPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR

A0A1S3CL26 uncharacterized protein LOC1035021861.3e-6982.35Show/hide
Query:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF
        M+CETSDYP KSLQFK NDKFFSK+L+RESSRAN+SSRIYYGGLAGAVPFVWESQPGTP+HRFSDDLTPPLTPPPSYFS SL+KP K RSKSLSL HIFF
Subjt:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF

Query:  NHKRKLDLLT-PPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR
        N KRK DLL+ PPVSKSASLPS GS+FDSA GAKF GRRSARRF       KE E+AAASGSVLCFG+GR
Subjt:  NHKRKLDLLT-PPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR

A0A6J1CSP7 uncharacterized protein LOC1110138655.3e-5078.2Show/hide
Query:  TSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSR-IYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHK
        +SDYP KSLQ K NDKFFSKLL+RESSRAN SSR +YYGG AGAVPF WESQPGTP HRFSD LTPPLTPPPS+FS S +KPPKNRSKSL+LFHIFFN K
Subjt:  TSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSR-IYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHK

Query:  RKLDLLTPPVSKSASLPSSGSMFDSAVGAKFAG
        RK DLL PP S+SA+LPSSGS  DS    KFAG
Subjt:  RKLDLLTPPVSKSASLPSSGSMFDSAVGAKFAG

A0A6J1EB06 uncharacterized protein LOC1114324131.1e-6378.95Show/hide
Query:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF
        MLCETSD   +SLQ KHNDKFFSKLLTRESSRA++SSR+YY GLAGAVPF WESQPGTP+HRFSDDLTPPLTPPPSYFS SL+KPPK RSKSLSLFHIFF
Subjt:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF

Query:  NHKRKL-DLLTPPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAA-SGSVLCFGIGR
        N KRK+ DLL+PP SKSASLPSSGSMFDSA     AGRR  RR   G+S SKE   AAA +GSVLCFGIGR
Subjt:  NHKRKL-DLLTPPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAA-SGSVLCFGIGR

A0A6J1IKR7 uncharacterized protein LOC1114783345.1e-6995Show/hide
Query:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF
        MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF
Subjt:  MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFF

Query:  NHKRKLDLLTPPVSKSASLPSSGSMFDSAVGAKFAGRRSA
        NHKRKLDLLTPPVSKSASLPSSGS FDSAVGA    R  A
Subjt:  NHKRKLDLLTPPVSKSASLPSSGSMFDSAVGAKFAGRRSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06930.1 unknown protein2.5e-0733.09Show/hide
Query:  YYGGLAGAVPFVWESQPGTPLH--------------RFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLPSSGSM
        YYGG + AVPF WESQPGTP                 F+  ++ PLTPPPSYF  S   P   +  S    +  F+     +   P    S+S  SS S+
Subjt:  YYGGLAGAVPFVWESQPGTPLH--------------RFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSKSASLPSSGSM

Query:  FDSAV-GAKFAGRRSARRFVPGVSRSKEGEDAAASG
          S +  +  + RR +  F  G S       A +SG
Subjt:  FDSAV-GAKFAGRRSARRFVPGVSRSKEGEDAAASG

AT2G40475.1 unknown protein8.7e-1335.03Show/hide
Query:  NDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHR-FSDDL-TPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSK
        N    SK++ +ESS+ N SSRIYY G   +VPF+WE++PGTP H  FS+ L  PPLTPPPSY+S S     K           F        +  P  S 
Subjt:  NDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHR-FSDDL-TPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLTPPVSK

Query:  SASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGED----AAASGSVLCFGIG
        S++  SS S + S+        R  + +    S  KE ++    +++  S LC+  G
Subjt:  SASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGED----AAASGSVLCFGIG

AT3G56260.2 unknown protein2.6e-0936.43Show/hide
Query:  YYGGLAGAVPFVWESQPGTPL-HRFSDDLTP-PLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDL--------LTPPVSKSASLPSSGSMFDSA
        YYGG   ++PF+WES+PGTP  H  SD   P PLTPPPSY+S  +   P+ +SK  S    F +     DL         T   S S S  SS S F S+
Subjt:  YYGGLAGAVPFVWESQPGTPL-HRFSDDLTP-PLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDL--------LTPPVSKSASLPSSGSMFDSA

Query:  VGAKFAGRRSARRFVPGVSRSKEGEDAAAS-GSVLCFGIG
               R S  +  P +  + E ++  +S  S LC   G
Subjt:  VGAKFAGRRSARRFVPGVSRSKEGEDAAAS-GSVLCFGIG

AT4G25845.1 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2)2.7e-0643.94Show/hide
Query:  SSRANHSSRIYYG-GLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKP------PKN
        SS + +SS  YY   +   VPF WE QPGTP++    ++ PPL+PPP+  S  L KP      PKN
Subjt:  SSRANHSSRIYYG-GLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKP------PKN

AT5G01790.1 unknown protein6.9e-1038.56Show/hide
Query:  SRANHSSRI-YYGGLAGAVPFVWESQPGTPLHRFSDDLT-PPLTPPPSYFSHS---LQKPPKNRSKSL------SLFHIFFNHK---RKLDLLTPPVSKS
        S A  S RI YY G AGAVPF WES PGTP H  S+  T PPLTPPPS+FS S   +++  K  +K +       LF +  +H    +KL   +PP S S
Subjt:  SRANHSSRI-YYGGLAGAVPFVWESQPGTPLHRFSDDLT-PPLTPPPSYFSHS---LQKPPKNRSKSL------SLFHIFFNHK---RKLDLLTPPVSKS

Query:  ASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR
          +    + +D     KF   R+  R       S +      S S  CFGI R
Subjt:  ASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTGTGAAACCTCCGATTATCCTCCAAAATCGCTTCAATTCAAGCACAACGACAAATTCTTCTCCAAGCTTCTCACCAGAGAAAGTTCTAGAGCCAATCACTCTTC
TAGAATCTACTATGGCGGATTGGCCGGTGCTGTTCCTTTCGTTTGGGAGTCTCAGCCAGGTACGCCTCTTCACCGATTTTCCGATGATCTAACTCCTCCTCTCACTCCTC
CTCCTTCTTACTTTTCTCATTCTCTTCAAAAACCGCCAAAAAACCGCTCCAAATCGCTCTCTCTTTTCCATATCTTCTTCAATCATAAGAGGAAACTCGATCTGTTGACG
CCGCCGGTTTCCAAATCGGCGTCATTGCCGTCTTCCGGATCGATGTTCGATTCGGCCGTCGGTGCGAAGTTCGCCGGACGCCGTTCGGCGCGGCGGTTTGTGCCTGGAGT
CTCGCGTTCGAAGGAGGGAGAGGATGCGGCGGCCTCCGGCTCAGTGCTTTGTTTCGGAATCGGTAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTGTGAAACCTCCGATTATCCTCCAAAATCGCTTCAATTCAAGCACAACGACAAATTCTTCTCCAAGCTTCTCACCAGAGAAAGTTCTAGAGCCAATCACTCTTC
TAGAATCTACTATGGCGGATTGGCCGGTGCTGTTCCTTTCGTTTGGGAGTCTCAGCCAGGTACGCCTCTTCACCGATTTTCCGATGATCTAACTCCTCCTCTCACTCCTC
CTCCTTCTTACTTTTCTCATTCTCTTCAAAAACCGCCAAAAAACCGCTCCAAATCGCTCTCTCTTTTCCATATCTTCTTCAATCATAAGAGGAAACTCGATCTGTTGACG
CCGCCGGTTTCCAAATCGGCGTCATTGCCGTCTTCCGGATCGATGTTCGATTCGGCCGTCGGTGCGAAGTTCGCCGGACGCCGTTCGGCGCGGCGGTTTGTGCCTGGAGT
CTCGCGTTCGAAGGAGGGAGAGGATGCGGCGGCCTCCGGCTCAGTGCTTTGTTTCGGAATCGGTAGGTGA
Protein sequenceShow/hide protein sequence
MLCETSDYPPKSLQFKHNDKFFSKLLTRESSRANHSSRIYYGGLAGAVPFVWESQPGTPLHRFSDDLTPPLTPPPSYFSHSLQKPPKNRSKSLSLFHIFFNHKRKLDLLT
PPVSKSASLPSSGSMFDSAVGAKFAGRRSARRFVPGVSRSKEGEDAAASGSVLCFGIGR