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Carg19523 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19523
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionthioredoxin H-type-like
Genome locationCarg_Chr03:3693337..3697298
RNA-Seq ExpressionCarg19523
SyntenyCarg19523
Gene Ontology termsGO:0007154 - cell communication (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009536 - plastid (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR013766 - Thioredoxin domain
IPR017937 - Thioredoxin, conserved site
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603527.1 Ubiquitin-conjugating enzyme E2 28, partial [Cucurbita argyrosperma subsp. sororia]7.5e-73100Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
        PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ

KAG7033711.1 hypothetical protein SDJN02_03436, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-73100Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
        PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ

XP_022950143.1 thioredoxin H-type-like [Cucurbita moschata]7.5e-73100Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
        PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ

XP_022978310.1 thioredoxin H-type-like [Cucurbita maxima]1.1e-7198.55Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQK+EEANKDGKIVIANFSA WCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
        PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ

XP_038883656.1 thioredoxin H9 [Benincasa hispida]4.1e-6386.96Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MGLCASKSET+DDESEHHVEFA GNV LITTK+AW+QK+EEAN  GKIVIANFSA+WCGPCK+VAPFYSELSEK+PSLMFLVVDVDELTDFST+WDIKAT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
        PTFFFLK GQQIDKLVGANK ELE K+TA+ADSLP NQ
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ

TrEMBL top hitse value%identityAlignment
A0A0A0L068 Thioredoxin domain-containing protein5.8e-6386.23Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MGLC SK+ETKDD+S+HHVEFA G V LITTKEAW+QK+EEAN  GKIVIANFSA+WCGPCKVVAPFYSELSEKY SLMFLVVDVDELTDFST+WDIKAT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
        PTFFFLKEGQQIDKLVGANK ELE K+TA+ADSLPPN+
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ

A0A1S3CKE7 thioredoxin H-type5.8e-6386.23Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MGLC SKSET+DD+SEHHVEFA GNV LITTKE+W+QK+EEAN  GKIVIANFSA+WCGPCKVVAPFYSELSEKY SLMFLVVDVDELTDFST+WDIKAT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
        PTFFFLKEGQQIDKLVGANK ELE K+ A+ADSLPPN+
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ

A0A5A7SL29 Thioredoxin H-type5.8e-6386.23Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MGLC SKSET+DD+SEHHVEFA GNV LITTKE+W+QK+EEAN  GKIVIANFSA+WCGPCKVVAPFYSELSEKY SLMFLVVDVDELTDFST+WDIKAT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
        PTFFFLKEGQQIDKLVGANK ELE K+ A+ADSLPPN+
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ

A0A6J1GEY7 thioredoxin H-type-like3.6e-73100Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
        PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ

A0A6J1IPQ7 thioredoxin H-type-like5.3e-7298.55Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQK+EEANKDGKIVIANFSA WCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
        PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ

SwissProt top hitse value%identityAlignment
P85801 Thioredoxin H-type9.6e-5570.07Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MGLC +K     D+ E H+E A GNV LITTKE W+QK+ EA++DGKIV+ANFSA WCGPCK +AP+Y ELSE YPSLMFLV+DVDEL+DFS +W+IKAT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPN
        PTFFFL++GQQ+DKLVGANKPEL  K+TA+ DSLPP+
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPN

Q0DKF1 Thioredoxin H4-22.1e-4664.39Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MG C  K     +E +  ++F  GNV +IT+KE W++K+EEANKDGKIV+ANFSASWCGPC+V+AP Y+E+S+ YP LMFL +DVD+L DFS++WDI+AT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALAD
        PTFFF+K  +Q+DKLVGANKPELE KV ALAD
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALAD

Q9AS75 Thioredoxin H4-12.5e-4766.17Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MG C  K E  D+E +  ++F  GNV +I+ KE W+ K+ EANKDGKIVIANFSA+WCGPC+V+AP Y+E+S+ YP  MFL +DVDEL DFS++WDI+AT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALADS
        PTFFFLK G+Q+DKLVGANKPELE KV ALADS
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALADS

Q9C9Y6 Thioredoxin H96.9e-5371.85Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MG C SK +  DD+S H+VEF+ GNV LITTKE+W+ K+ EA++DGKIV+ANFSA+WCGPCK+VAPF+ ELSEK+ SLMFL+VDVDEL+DFS++WDIKAT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLP
        PTFFFLK GQQI KLVGANKPEL+ KVT++ DS+P
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLP

Q9LXZ8 Putative thioredoxin H101.8e-2944.96Show/hide
Query:  CASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTF
        C S +             + G V  ++  E WE+K+ EAN  GKI++ NFSA WC PCK + P + +L+ +YPS++F+ VDV+EL +FS  W+++ATPT 
Subjt:  CASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTF

Query:  FFLKEGQQIDKLVGANKPELELKVTALAD
         FLK+G+Q+DKLVGA   EL+ K  A AD
Subjt:  FFLKEGQQIDKLVGANKPELELKVTALAD

Arabidopsis top hitse value%identityAlignment
AT2G40790.1 C-terminal cysteine residue is changed to a serine 22.4e-2943.51Show/hide
Query:  CASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTF
        C ++       S+    F  G V  ++  E WE+K+ EAN  GKI++ NF ASWC P K + P Y EL+  Y S++F+ +DV+EL +FS  W++ ATPT 
Subjt:  CASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTF

Query:  FFLKEGQQIDKLVGANKPELELKVTALADSL
         FLK+G+Q+DKLVG +  EL+ K  A A+ L
Subjt:  FFLKEGQQIDKLVGANKPELELKVTALADSL

AT3G08710.1 thioredoxin H-type 94.9e-5471.85Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MG C SK +  DD+S H+VEF+ GNV LITTKE+W+ K+ EA++DGKIV+ANFSA+WCGPCK+VAPF+ ELSEK+ SLMFL+VDVDEL+DFS++WDIKAT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLP
        PTFFFLK GQQI KLVGANKPEL+ KVT++ DS+P
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLP

AT3G08710.2 thioredoxin H-type 94.9e-5471.85Show/hide
Query:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT
        MG C SK +  DD+S H+VEF+ GNV LITTKE+W+ K+ EA++DGKIV+ANFSA+WCGPCK+VAPF+ ELSEK+ SLMFL+VDVDEL+DFS++WDIKAT
Subjt:  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKAT

Query:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLP
        PTFFFLK GQQI KLVGANKPEL+ KVT++ DS+P
Subjt:  PTFFFLKEGQQIDKLVGANKPELELKVTALADSLP

AT3G51030.1 thioredoxin H-type 12.5e-2647.52Show/hide
Query:  GNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANKPEL
        G V    T E W +++++AN+   +V+ +F+ASWCGPC+ +APF+++L++K P+++FL VD DEL   ++ W I+A PTF FLKEG+ +DK+VGA K EL
Subjt:  GNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANKPEL

Query:  E
        +
Subjt:  E

AT3G56420.1 Thioredoxin superfamily protein1.3e-3044.96Show/hide
Query:  CASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTF
        C S +             + G V  ++  E WE+K+ EAN  GKI++ NFSA WC PCK + P + +L+ +YPS++F+ VDV+EL +FS  W+++ATPT 
Subjt:  CASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTF

Query:  FFLKEGQQIDKLVGANKPELELKVTALAD
         FLK+G+Q+DKLVGA   EL+ K  A AD
Subjt:  FFLKEGQQIDKLVGANKPELELKVTALAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTTTGTGCTAGTAAGTCCGAAACCAAAGACGATGAGTCTGAGCATCATGTCGAGTTTGCCACCGGAAATGTGCAGCTCATCACAACCAAAGAAGCTTGGGAGCA
AAAGATGGAAGAAGCTAATAAGGATGGCAAAATTGTGATAGCGAACTTCAGTGCATCGTGGTGTGGTCCGTGCAAGGTGGTTGCTCCATTCTACAGCGAATTGTCGGAGA
AATACCCGTCGTTGATGTTCCTAGTAGTCGATGTTGATGAATTAACTGATTTCAGCACCACTTGGGATATCAAAGCTACTCCTACCTTTTTCTTCCTCAAAGAAGGACAG
CAAATCGACAAGCTCGTCGGGGCGAATAAACCCGAACTAGAGCTGAAAGTCACTGCATTAGCGGATTCTCTTCCTCCCAATCAA
mRNA sequenceShow/hide mRNA sequence
CGCCCATTTCGATTCCCAATTCAGAGAGAGAGAGAGAGAGAGATCCTTCAAAATTTTCAATTCGTCAAGCAATCCGATCGTCGTTGACCGACGTTGTCTTATCCCTCTCC
GATTTGACCCCTTTTCCGACAGCTTCCCATTAAAATCAATATCCTGAAGAAGGTTCATCCACGAATCCCTGTTTGGTTTTTTTTTGTTTTCTCCACGATTTTTGGATGTC
ATCATCCCTCCACGGACTACTGAATTGACTCGAGGCTCCAATTCGGGGGTTGTTGAGGGCTAACCTGTGGTACCTAGGACACTTCGAACATCATCTGCACTTGGACCGCC
AAATGGGACTTTGTGCTAGTAAGTCCGAAACCAAAGACGATGAGTCTGAGCATCATGTCGAGTTTGCCACCGGAAATGTGCAGCTCATCACAACCAAAGAAGCTTGGGAG
CAAAAGATGGAAGAAGCTAATAAGGATGGCAAAATTGTGATAGCGAACTTCAGTGCATCGTGGTGTGGTCCGTGCAAGGTGGTTGCTCCATTCTACAGCGAATTGTCGGA
GAAATACCCGTCGTTGATGTTCCTAGTAGTCGATGTTGATGAATTAACTGATTTCAGCACCACTTGGGATATCAAAGCTACTCCTACCTTTTTCTTCCTCAAAGAAGGAC
AGCAAATCGACAAGCTCGTCGGGGCGAATAAACCCGAACTAGAGCTGAAAGTCACTGCATTAGCGGATTCTCTTCCTCCCAATCAA
Protein sequenceShow/hide protein sequence
MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQ
QIDKLVGANKPELELKVTALADSLPPNQ