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Carg19535 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19535
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
Genome locationCarg_Chr03:3621255..3621808
RNA-Seq ExpressionCarg19535
SyntenyCarg19535
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR017384 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033699.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-51100Show/hide
Query:  MRRIRAQAKAHMLCEIYRRARSHRRNPEISTADREMGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSH
        MRRIRAQAKAHMLCEIYRRARSHRRNPEISTADREMGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSH
Subjt:  MRRIRAQAKAHMLCEIYRRARSHRRNPEISTADREMGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSH

Query:  S
        S
Subjt:  S
XP_004142669.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis sativus]1.1e-2893.85Show/hide
Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
        GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN+SA SHS
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
XP_022950918.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita moschata]4.0e-31100Show/hide
Query:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
        MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
Subjt:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
XP_022966508.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita maxima]1.9e-2893.85Show/hide
Query:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSH
        M WRW+EAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN SA SH
Subjt:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSH
XP_038881013.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Benincasa hispida]2.9e-2995.38Show/hide
Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
        GWRW+EAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN+SA SHS
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
TrEMBL top hitse value%identityAlignment
A0A0A0L2Y7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 15.3e-2993.85Show/hide
Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
        GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN+SA SHS
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
A0A1S3CIY2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 19.0e-2993.85Show/hide
Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
        GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN+SA SHS
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
A0A5D3C7B6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 19.0e-2993.85Show/hide
Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
        GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGRPKHIGNDMWDVAMERRDKKLVEN+SA SHS
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
A0A6J1GH44 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11.9e-31100Show/hide
Query:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
        MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
Subjt:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS
A0A6J1HU02 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 19.0e-2993.85Show/hide
Query:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSH
        M WRW+EAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVEN SA SH
Subjt:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSH
SwissProt top hitse value%identityAlignment
Q9C9Z5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11.6e-2280Show/hide
Query:  WLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGS
        WLEA LPLGII GMLCIMGN+QY+IHKA HGRPKHIG+D WDVAMERRDKK+VE  +A S
Subjt:  WLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGS
Arabidopsis top hitse value%identityAlignment
AT3G08610.1 unknown protein1.1e-2380Show/hide
Query:  WLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGS
        WLEA LPLGII GMLCIMGN+QY+IHKA HGRPKHIG+D WDVAMERRDKK+VE  +A S
Subjt:  WLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCGAATACGAGCCCAAGCTAAGGCCCATATGCTCTGCGAGATATATCGTCGAGCTCGTAGCCATCGGAGGAACCCCGAGATTTCAACAGCAGATAGAGAAATGGG
ATGGAGATGGCTGGAAGCGGCACTTCCTCTGGGAATCATTGCCGGAATGCTTTGTATAATGGGGAATGCTCAATATCATATCCACAAAGCCGCCCATGGCCGGCCGAAGC
ACATCGGTAATGATATGTGGGACGTTGCCATGGAACGCAGGGACAAGAAGCTCGTGGAGAATGTCTCCGCCGGTTCGCATAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGTCGAATACGAGCCCAAGCTAAGGCCCATATGCTCTGCGAGATATATCGTCGAGCTCGTAGCCATCGGAGGAACCCCGAGATTTCAACAGCAGATAGAGAAATGGG
ATGGAGATGGCTGGAAGCGGCACTTCCTCTGGGAATCATTGCCGGAATGCTTTGTATAATGGGGAATGCTCAATATCATATCCACAAAGCCGCCCATGGCCGGCCGAAGC
ACATCGGTAATGATATGTGGGACGTTGCCATGGAACGCAGGGACAAGAAGCTCGTGGAGAATGTCTCCGCCGGTTCGCATAGTTAATTTTATTGACCTGCATCCCCTGGT
ACATGTTTATGCGTTCTTATTACTGTTTTTCAGTTTTTGGGAAGGTTAATCTCGGGGTATGAAATTTTTAGGGCAATCCTCTTTC
Protein sequenceShow/hide protein sequence
MRRIRAQAKAHMLCEIYRRARSHRRNPEISTADREMGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRPKHIGNDMWDVAMERRDKKLVENVSAGSHS