CuGenDBv2

Gene ID	Carg19561
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PHD finger protein ING
Genome location	Carg_Chr03:3433217..3433788
RNA-Seq Expression	Carg19561
Synteny	Carg19561
Gene Ontology terms	GO:0006325 - chromatin organization (biological process) GO:0005634 - nucleus (cellular component) GO:0035064 - methylated histone binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR024610 - Inhibitor of growth protein, N-terminal histone-binding IPR028651 - ING family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0060114.1 PHD finger protein ING2 [Cucumis melo var. makuwa]

4.8e-47

94.44

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Query:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL
        MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQS KKG  NSN+EDEE+AFEKLRKDIEANQDNALSLCTEKVLL
Subjt:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL

Query:  ARQAGDLV
        ARQAGDL+
Subjt:  ARQAGDLV

KAG7033673.1 PHD finger protein ING2, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.5e-59

100

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Query:  PRSETLSQTLIMAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDN
        PRSETLSQTLIMAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDN
Subjt:  PRSETLSQTLIMAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDN

Query:  ALSLCTEKVLLARQAGDLVWHT
        ALSLCTEKVLLARQAGDLVWHT
Subjt:  ALSLCTEKVLLARQAGDLVWHT

XP_022949615.1 PHD finger protein ING2-like [Cucurbita moschata]

7.9e-50

99.07

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Query:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL
        MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL
Subjt:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL

Query:  ARQAGDLV
        ARQAGDL+
Subjt:  ARQAGDLV

XP_022978265.1 PHD finger protein ING2-like [Cucurbita maxima]

8.7e-49

97.22

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Query:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL
        MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQS KKGINNSN+EDEETAFEKLRKDIEANQDNALSLCTEKVLL
Subjt:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL

Query:  ARQAGDLV
        ARQAGDL+
Subjt:  ARQAGDLV

XP_023543183.1 PHD finger protein ING2-like [Cucurbita pepo subsp. pepo]

1.8e-49

98.15

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Query:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL
        MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSN+EDEETAFEKLRKDIEANQDNALSLCTEKVLL
Subjt:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL

Query:  ARQAGDLV
        ARQAGDL+
Subjt:  ARQAGDLV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KWF6 PHD finger protein ING

5.2e-47

93.52

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Query:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL
        MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQS KKG  NSN++DEE+AFEKLRKDIEANQDNALSLCTEKVLL
Subjt:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL

Query:  ARQAGDLV
        ARQAGDL+
Subjt:  ARQAGDLV

A0A1S3B596 PHD finger protein ING

2.3e-47

94.44

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Query:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL
        MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQS KKG  NSN+EDEE+AFEKLRKDIEANQDNALSLCTEKVLL
Subjt:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL

Query:  ARQAGDLV
        ARQAGDL+
Subjt:  ARQAGDLV

A0A5A7UYI0 PHD finger protein ING2

2.3e-47

94.44

Show/hide

Query:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL
        MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQS KKG  NSN+EDEE+AFEKLRKDIEANQDNALSLCTEKVLL
Subjt:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL

Query:  ARQAGDLV
        ARQAGDL+
Subjt:  ARQAGDLV

A0A6J1GD88 PHD finger protein ING

3.8e-50

99.07

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Query:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL
        MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL
Subjt:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL

Query:  ARQAGDLV
        ARQAGDL+
Subjt:  ARQAGDLV

A0A6J1IPK9 PHD finger protein ING

4.2e-49

97.22

Show/hide

Query:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL
        MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQS KKGINNSN+EDEETAFEKLRKDIEANQDNALSLCTEKVLL
Subjt:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLL

Query:  ARQAGDLV
        ARQAGDL+
Subjt:  ARQAGDLV

SwissProt top hits

e value

%identity

Alignment

B3H615 PHD finger protein ING2

1.1e-38

75.68

Show/hide

Query:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEK
        MAIARTGVYVDDYLEYAST PAELQRLLNT+RELD+RSQS+I+QTRQQTKYCLGL++QS KKG     N+   DEE   EK+RK+IE++Q+NALSLCTEK
Subjt:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEK

Query:  VLLARQAGDLV
        VLLARQA DL+
Subjt:  VLLARQAGDLV

Q54PN9 Inhibitor of growth protein 1 homolog

3.1e-04

29.41

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Query:  GVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGD
        G Y+++YL+  STLP+EL R    IRELD R+  ++++  ++ K  L ++T   ++ ++       E   E+  K I+      +    EKV L+ Q  +
Subjt:  GVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGD

Query:  LV
        L+
Subjt:  LV

Arabidopsis top hits

e value

%identity

Alignment

AT1G54390.1 PHD finger protein-related

7.9e-40

75.68

Show/hide

Query:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEK
        MAIARTGVYVDDYLEYAST PAELQRLLNT+RELD+RSQS+I+QTRQQTKYCLGL++QS KKG     N+   DEE   EK+RK+IE++Q+NALSLCTEK
Subjt:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEK

Query:  VLLARQAGDLV
        VLLARQA DL+
Subjt:  VLLARQAGDLV

AT1G54390.2 PHD finger protein-related

7.9e-40

75.68

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Query:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEK
        MAIARTGVYVDDYLEYAST PAELQRLLNT+RELD+RSQS+I+QTRQQTKYCLGL++QS KKG     N+   DEE   EK+RK+IE++Q+NALSLCTEK
Subjt:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEK

Query:  VLLARQAGDLV
        VLLARQA DL+
Subjt:  VLLARQAGDLV

AT1G54390.3 PHD finger protein-related

7.9e-40

75.68

Show/hide

Query:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEK
        MAIARTGVYVDDYLEYAST PAELQRLLNT+RELD+RSQS+I+QTRQQTKYCLGL++QS KKG     N+   DEE   EK+RK+IE++Q+NALSLCTEK
Subjt:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEK

Query:  VLLARQAGDLV
        VLLARQA DL+
Subjt:  VLLARQAGDLV

AT1G54390.4 PHD finger protein-related

7.9e-40

75.68

Show/hide

Query:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEK
        MAIARTGVYVDDYLEYAST PAELQRLLNT+RELD+RSQS+I+QTRQQTKYCLGL++QS KKG     N+   DEE   EK+RK+IE++Q+NALSLCTEK
Subjt:  MAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEK

Query:  VLLARQAGDLV
        VLLARQA DL+
Subjt:  VLLARQAGDLV

AT1G54390.5 PHD finger protein-related

1.7e-18

64.38

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Query:  QSMIDQTRQQTKYCLGLSTQSLKKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV
        +++I+QTRQQTKYCLGL++QS KKG     N+   DEE   EK+RK+IE++Q+NALSLCTEKVLLARQA DL+
Subjt:  QSMIDQTRQQTKYCLGLSTQSLKKGIN---NSNSEDEETAFEKLRKDIEANQDNALSLCTEKVLLARQAGDLV

Sequences

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CDS sequence

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CCTAGATCCGAGACCTTATCTCAAACCTTGATCATGGCGATTGCTCGAACAGGAGTCTACGTCGATGACTATTTGGAATATGCCAGCACATTGCCTGCTGAGCTTCAGAG
GCTACTCAACACAATTAGAGAACTCGACGATCGATCTCAGTCGATGATTGATCAGACGAGGCAGCAAACGAAATACTGTCTTGGATTGTCGACACAGAGTTTGAAGAAAG
GAATTAATAATAGTAATTCTGAGGATGAGGAGACCGCCTTTGAAAAATTGCGGAAGGATATTGAGGCGAATCAGGATAACGCATTGAGTTTGTGCACTGAGAAGGTTTTG
TTGGCACGTCAAGCTGGCGACCTGGTATGGCATACTTAG

mRNA sequence

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Protein sequence

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PRSETLSQTLIMAIARTGVYVDDYLEYASTLPAELQRLLNTIRELDDRSQSMIDQTRQQTKYCLGLSTQSLKKGINNSNSEDEETAFEKLRKDIEANQDNALSLCTEKVL
LARQAGDLVWHT

Carg19561 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome