; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg19562 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19562
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPHD finger protein ING
Genome locationCarg_Chr03:3430575..3433041
RNA-Seq ExpressionCarg19562
SyntenyCarg19562
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0035064 - methylated histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR028651 - ING family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033672.1 PHD finger protein ING2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-77100Show/hide
Query:  MDVEMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPI
        MDVEMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPI
Subjt:  MDVEMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPI

Query:  DPNEPTYCICHQVSFGDMIACDNENVSPLCVKEVNGFIIPALD
        DPNEPTYCICHQVSFGDMIACDNENVSPLCVKEVNGFIIPALD
Subjt:  DPNEPTYCICHQVSFGDMIACDNENVSPLCVKEVNGFIIPALD

XP_022949615.1 PHD finger protein ING2-like [Cucurbita moschata]3.0e-6498.36Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
        ++IDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN

Query:  EPTYCICHQVSFGDMIACDNEN
        EPTYCICHQVSFGDMIACDNEN
Subjt:  EPTYCICHQVSFGDMIACDNEN

XP_022966434.1 PHD finger protein ING2-like [Cucurbita maxima]3.6e-6295.08Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
        ++IDSHIKRLDEDLNNFAEDLKQEGKISPDEPA LPPLPLVSKNEKRK IY+ PQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN

Query:  EPTYCICHQVSFGDMIACDNEN
        EPTYCICHQVSFGDMIACDNEN
Subjt:  EPTYCICHQVSFGDMIACDNEN

XP_022978265.1 PHD finger protein ING2-like [Cucurbita maxima]2.1e-6296.72Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
        ++IDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLV KNEKRKSIYMVPQSKR DYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN

Query:  EPTYCICHQVSFGDMIACDNEN
        EPTYCICHQVSFGDMIACDNEN
Subjt:  EPTYCICHQVSFGDMIACDNEN

XP_023543183.1 PHD finger protein ING2-like [Cucurbita pepo subsp. pepo]1.5e-6397.54Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
        ++IDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRD ELMPPPGSHKKDFAPSLDVDQPIDPN
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN

Query:  EPTYCICHQVSFGDMIACDNEN
        EPTYCICHQVSFGDMIACDNEN
Subjt:  EPTYCICHQVSFGDMIACDNEN

TrEMBL top hitse value%identityAlignment
A0A0A0KWF6 PHD finger protein ING8.7e-6292.62Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
        ++IDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNE+R+ +++ PQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN

Query:  EPTYCICHQVSFGDMIACDNEN
        EPTYCICHQVSFGDMIACDNEN
Subjt:  EPTYCICHQVSFGDMIACDNEN

A0A6J1EBN2 PHD finger protein ING8.7e-6294.26Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
        ++IDSHIKRLDEDLNNFAEDLKQEGKISPDEPA LPPLPLV KNEKRK IY+ PQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN

Query:  EPTYCICHQVSFGDMIACDNEN
        EPTYCICHQVSFGDMIACDNEN
Subjt:  EPTYCICHQVSFGDMIACDNEN

A0A6J1GD88 PHD finger protein ING1.4e-6498.36Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
        ++IDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN

Query:  EPTYCICHQVSFGDMIACDNEN
        EPTYCICHQVSFGDMIACDNEN
Subjt:  EPTYCICHQVSFGDMIACDNEN

A0A6J1HTT1 PHD finger protein ING1.8e-6295.08Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
        ++IDSHIKRLDEDLNNFAEDLKQEGKISPDEPA LPPLPLVSKNEKRK IY+ PQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN

Query:  EPTYCICHQVSFGDMIACDNEN
        EPTYCICHQVSFGDMIACDNEN
Subjt:  EPTYCICHQVSFGDMIACDNEN

A0A6J1IPK9 PHD finger protein ING1.0e-6296.72Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
        ++IDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLV KNEKRKSIYMVPQSKR DYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN

Query:  EPTYCICHQVSFGDMIACDNEN
        EPTYCICHQVSFGDMIACDNEN
Subjt:  EPTYCICHQVSFGDMIACDNEN

SwissProt top hitse value%identityAlignment
B3H615 PHD finger protein ING21.1e-5077.87Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
        ++IDSH+KRLDEDLNNFAEDLKQEGKI PDEP++LPPLP+V K EKRKS Y  PQ K+ DYRDRDWD  RDRDFELMPPPGS++KD  P    +QPIDPN
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN

Query:  EPTYCICHQVSFGDMIACDNEN
        EPTYC+CHQVSFGDMIACDNEN
Subjt:  EPTYCICHQVSFGDMIACDNEN

Q3T095 Inhibitor of growth protein 42.5e-1336.22Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFA---PSLDVDQPI
        EM+D HI+RLD DL  F  DLK++   S D  +           +++K+     + K  D       +++ +     P  G     F    PS  +D P+
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFA---PSLDVDQPI

Query:  DPNEPTYCICHQVSFGDMIACDNENVS
        DPNEPTYC+CHQVS+G+MI CDN + S
Subjt:  DPNEPTYCICHQVSFGDMIACDNENVS

Q5ZKY4 Inhibitor of growth protein 49.4e-1335.07Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFEL----------MPPPGSHKKDFAPS
        EM+D HI+RLD DL  F  DLK++   S D  +        SK +K+       ++ R   + ++ D E  +  +              P     +  PS
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFEL----------MPPPGSHKKDFAPS

Query:  LDVDQPIDPNEPTYCICHQVSFGDMIACDNENVS
          +D P+DPNEPTYC+CHQVS+G+MI CDN + S
Subjt:  LDVDQPIDPNEPTYCICHQVSFGDMIACDNENVS

Q8C0D7 Inhibitor of growth protein 41.9e-1336.57Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFE-------LMPPPGSHKKDFA---PS
        EM+D HI+RLD DL  F  DLK++   S D  +        SK +K+       ++ R   + ++ D E  +  +         P  G     F    PS
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFE-------LMPPPGSHKKDFA---PS

Query:  LDVDQPIDPNEPTYCICHQVSFGDMIACDNENVS
          +D P+DPNEPTYC+CHQVS+G+MI CDN + S
Subjt:  LDVDQPIDPNEPTYCICHQVSFGDMIACDNENVS

Q9UNL4 Inhibitor of growth protein 41.5e-1336.57Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFE-------LMPPPGSHKKDFA---PS
        EM+D HI+RLD DL  F  DLK++   S D  +        SK +K+       ++ R   + ++ D E  +  +         P  G     F    PS
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFE-------LMPPPGSHKKDFA---PS

Query:  LDVDQPIDPNEPTYCICHQVSFGDMIACDNENVS
          +D P+DPNEPTYC+CHQVS+G+MI CDN + S
Subjt:  LDVDQPIDPNEPTYCICHQVSFGDMIACDNENVS

Arabidopsis top hitse value%identityAlignment
AT1G54390.1 PHD finger protein-related8.6e-5466.05Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
        ++IDSH+KRLDEDLNNFAEDLKQEGKI PDEP++LPPLP+V K EKRKS Y  PQ K+ DYRDRDWD  RDRDFELMPPPGS++KD  P    +QPIDPN
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN

Query:  EPTYCICHQVSFGDMIACDNENVSPL-----------------------CVKEVNGFIIPAL
        EPTYC+CHQVSFGDMIACDNENVS L                         KEVNGF I AL
Subjt:  EPTYCICHQVSFGDMIACDNENVSPL-----------------------CVKEVNGFIIPAL

AT1G54390.2 PHD finger protein-related8.6e-5466.05Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
        ++IDSH+KRLDEDLNNFAEDLKQEGKI PDEP++LPPLP+V K EKRKS Y  PQ K+ DYRDRDWD  RDRDFELMPPPGS++KD  P    +QPIDPN
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN

Query:  EPTYCICHQVSFGDMIACDNENVSPL-----------------------CVKEVNGFIIPAL
        EPTYC+CHQVSFGDMIACDNENVS L                         KEVNGF I AL
Subjt:  EPTYCICHQVSFGDMIACDNENVSPL-----------------------CVKEVNGFIIPAL

AT1G54390.3 PHD finger protein-related8.1e-5277.87Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
        ++IDSH+KRLDEDLNNFAEDLKQEGKI PDEP++LPPLP+V K EKRKS Y  PQ K+ DYRDRDWD  RDRDFELMPPPGS++KD  P    +QPIDPN
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN

Query:  EPTYCICHQVSFGDMIACDNEN
        EPTYC+CHQVSFGDMIACDNEN
Subjt:  EPTYCICHQVSFGDMIACDNEN

AT1G54390.4 PHD finger protein-related8.1e-5277.87Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
        ++IDSH+KRLDEDLNNFAEDLKQEGKI PDEP++LPPLP+V K EKRKS Y  PQ K+ DYRDRDWD  RDRDFELMPPPGS++KD  P    +QPIDPN
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN

Query:  EPTYCICHQVSFGDMIACDNEN
        EPTYC+CHQVSFGDMIACDNEN
Subjt:  EPTYCICHQVSFGDMIACDNEN

AT1G54390.5 PHD finger protein-related8.1e-5277.87Show/hide
Query:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN
        ++IDSH+KRLDEDLNNFAEDLKQEGKI PDEP++LPPLP+V K EKRKS Y  PQ K+ DYRDRDWD  RDRDFELMPPPGS++KD  P    +QPIDPN
Subjt:  EMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPN

Query:  EPTYCICHQVSFGDMIACDNEN
        EPTYC+CHQVSFGDMIACDNEN
Subjt:  EPTYCICHQVSFGDMIACDNEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTGGAGATGATAGATAGCCATATTAAACGACTTGATGAGGATCTAAACAACTTTGCAGAAGATCTGAAACAAGAGGGAAAAATTTCACCAGATGAACCAGCAAT
TCTTCCACCATTGCCACTAGTTTCGAAAAATGAAAAGCGCAAATCAATATATATGGTACCTCAATCTAAGAGGCCAGATTACAGGGACCGGGATTGGGATAGGGAGCGTG
ATCGAGATTTTGAGCTCATGCCTCCTCCAGGAAGCCATAAAAAGGACTTTGCACCTTCACTTGATGTAGATCAGCCCATTGATCCAAATGAACCTACGTATTGCATTTGT
CATCAGGTGTCATTTGGAGATATGATTGCCTGTGACAACGAAAATGTAAGTCCTCTCTGTGTCAAGGAGGTGAATGGTTTCATTATTCCTGCGTTGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTGGAGATGATAGATAGCCATATTAAACGACTTGATGAGGATCTAAACAACTTTGCAGAAGATCTGAAACAAGAGGGAAAAATTTCACCAGATGAACCAGCAAT
TCTTCCACCATTGCCACTAGTTTCGAAAAATGAAAAGCGCAAATCAATATATATGGTACCTCAATCTAAGAGGCCAGATTACAGGGACCGGGATTGGGATAGGGAGCGTG
ATCGAGATTTTGAGCTCATGCCTCCTCCAGGAAGCCATAAAAAGGACTTTGCACCTTCACTTGATGTAGATCAGCCCATTGATCCAAATGAACCTACGTATTGCATTTGT
CATCAGGTGTCATTTGGAGATATGATTGCCTGTGACAACGAAAATGTAAGTCCTCTCTGTGTCAAGGAGGTGAATGGTTTCATTATTCCTGCGTTGGACTGACTCCAGAA
ACAAGATTTAAAGGAAAGTGGTATTGTCCAACCTGCAAAGTATTACCACAATGTCAATAACGAAGGTGCACAGGCAAAAATTTC
Protein sequenceShow/hide protein sequence
MDVEMIDSHIKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPLVSKNEKRKSIYMVPQSKRPDYRDRDWDRERDRDFELMPPPGSHKKDFAPSLDVDQPIDPNEPTYCIC
HQVSFGDMIACDNENVSPLCVKEVNGFIIPALD