CuGenDBv2

Gene ID	Carg19571
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transmembrane protein 18
Genome location	Carg_Chr03:3344380..3346437
RNA-Seq Expression	Carg19571
Synteny	Carg19571
Gene Ontology terms	GO:0009846 - pollen germination (biological process) GO:0009860 - pollen tube growth (biological process) GO:0052543 - callose deposition in cell wall (biological process) GO:0005640 - nuclear outer membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR026721 - Transmembrane protein 18

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7033663.1 Transmembrane protein 18, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-82

100

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Query:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
        MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
Subjt:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSTLWSGPLLINTLFTLCYLVVRWKRAELRNRARLSQTKED
        KNFATQNYFDPNGVFLSTLWSGPLLINTLFTLCYLVVRWKRAELRNRARLSQTKED
Subjt:  KNFATQNYFDPNGVFLSTLWSGPLLINTLFTLCYLVVRWKRAELRNRARLSQTKED

XP_011650049.1 transmembrane protein 18 [Cucumis sativus]

1.5e-74

88.96

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Query:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
        M+ELRS MEEHMDQM+DL+QKLSSELRSGLRPA+DNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRK TNFQMFLFLLALAGVYFAE IN ILSKNW
Subjt:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED
        KNFATQNYFDPNGVFLS LWSGPL       LINTLFTLCYLVVRWKRAELR+RARLSQ+KED
Subjt:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED

XP_022949841.1 transmembrane protein 18 [Cucurbita moschata]

1.9e-80

95.71

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Query:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
        MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
Subjt:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED
        KNFATQNYFDPNGVFLSTLWSGPL       LINTLFTLCYLVVRWKRAELRNRARLSQTKED
Subjt:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED

XP_023543279.1 transmembrane protein 18 [Cucurbita pepo subsp. pepo]

1.6e-79

94.48

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Query:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
        MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWL+GLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
Subjt:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED
        KNFATQNYFDPNGVFLSTLWSGPL       LINTLFTLCYLVVRWKRAELRNRARLSQ+KED
Subjt:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED

XP_038900756.1 transmembrane protein 18 [Benincasa hispida]

9.7e-77

90.18

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Query:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
        MEELRSAMEEHMDQMADL+QK+SSELRSG+RPAVDNF+GFFHAIDWKEPWLMGLLGFHGLLLIITIFTRK TNFQMFLFLLALAGVYFAERINRILSKNW
Subjt:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED
        KNFATQNYFDPNGVFLS LWSGPL       LINTLFTLC+LVVRWKRAELR+RARLSQ+KED
Subjt:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LN62 Transmembrane protein 18

7.5e-75

88.96

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Query:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
        M+ELRS MEEHMDQM+DL+QKLSSELRSGLRPA+DNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRK TNFQMFLFLLALAGVYFAE IN ILSKNW
Subjt:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED
        KNFATQNYFDPNGVFLS LWSGPL       LINTLFTLCYLVVRWKRAELR+RARLSQ+KED
Subjt:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED

A0A5A7VF36 Transmembrane protein 18

3.7e-74

87.73

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Query:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
        M+ELRSAMEEHMDQM+DL+QKLSSELRSGLRPA+DNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRK TNFQMFLFL ALAGVYFAE IN+ILSKNW
Subjt:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED
        K FATQNYFDPNGVFLS LW GPL       LINTLFTLCYLVVRWKRAELR+RARLSQ+KED
Subjt:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED

A0A6J1DPY2 Transmembrane protein 18

3.7e-74

88.96

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Query:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
        MEELRSAMEEHMDQMADL+ KLSSELRSGLRPAVDNFIGFFHAI WKEPWLMGLLGFH LLLIITI TRK TNFQMFLFLLALAGVYFAERINRILSKNW
Subjt:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED
        KNFATQNYFDPNGVFLSTLWSGPL       LINTL TLC+LVVRWKRAEL++RARLSQ+KED
Subjt:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED

A0A6J1GD63 Transmembrane protein 18

9.1e-81

95.71

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Query:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
        MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
Subjt:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED
        KNFATQNYFDPNGVFLSTLWSGPL       LINTLFTLCYLVVRWKRAELRNRARLSQTKED
Subjt:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED

A0A6J1ISM9 Transmembrane protein 18

9.1e-81

95.71

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Query:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
        MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
Subjt:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED
        KNFATQNYFDPNGVFLSTLWSGPL       LINTLFTLCYLVVRWKRAELRNRARLSQTKED
Subjt:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED

SwissProt top hits

e value

%identity

Alignment

Q3SZ36 Transmembrane protein 18

9.0e-17

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Query:  DWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLWSGPLLINTLFTLCYLVVRWKRAEL
        DW EPWL+GL GFH L L++T F+ +    Q+  FL  +  VY AE IN + + NW+ F+   YFD  G+F+S ++S PLL+N L     +VV W R  L
Subjt:  DWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLWSGPLLINTLFTLCYLVVRWKRAEL

Q3TUD9 Transmembrane protein 18

2.6e-16

39.29

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Query:  DWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLWSGPLLINTLFTLCYLVVRWKRAEL
        DW EPWL+GLL FH L L++T F+ +    Q+  FL  +  VY AE IN + + NW+ F+   YFD  G+F+S ++S PLL N +     +V+ W R  L
Subjt:  DWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLWSGPLLINTLFTLCYLVVRWKRAEL

Query:  RNRARLSQTKED
             L   +E+
Subjt:  RNRARLSQTKED

Q5F410 Transmembrane protein 18

5.3e-17

44.21

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Query:  DWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLWSGPLLINTLFTLCYLVVRW
        DW EPWL+GL GFH L  ++T F+ +H   Q+  FL  +  VY AE IN + + NW+ F+   YFD  G+F+S ++S PLL+NT+     +VV W
Subjt:  DWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLWSGPLLINTLFTLCYLVVRW

Q641M3 Transmembrane protein 18

6.9e-17

37.39

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Query:  FFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLWSGPLLINTLFTLCYLVVRW
        F  ++DW EPWLM LL FH      T+ + K+   Q+  FLL +A VY AE +N + + NW++F+   YFD  G+F+S ++S PLL+NT+  +   V  W
Subjt:  FFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLWSGPLLINTLFTLCYLVVRW

Query:  KRAELRNRARLSQTK
        +        ++ Q K
Subjt:  KRAELRNRARLSQTK

Q6DGF8 Transmembrane protein 18

1.2e-16

40.54

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Query:  DWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLWSGPLLINTLFTLCYLVVRWKRAEL
        DW EPWL+GLL FH L L++T F+ +    Q+  FL  +  VY AE IN + + NW+ FA   YFD  G+F+S ++S PLL N +     +V+ W R  L
Subjt:  DWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLWSGPLLINTLFTLCYLVVRWKRAEL

Query:  RNRARLSQTKE
           + L   +E
Subjt:  RNRARLSQTKE

Arabidopsis top hits

e value

%identity

Alignment

AT1G34350.1 unknown protein

4.8e-66

71.78

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Query:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW
        MEE+RSAME+ +D +ADLV+KLS ELR+G +PA DNF+GFFHAIDWKEPW+MGL+ FH LLL++T+ +R+H NF MFLFLLALAGVYFAE +NR L KNW
Subjt:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNW

Query:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED
        K+F+TQNYFD NGVFLSTLWSGPL       LINTLF+LCYL+V+WKRAELR+RARL+ TKE+
Subjt:  KNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED

AT1G34350.2 unknown protein

1.6e-61

61.7

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Query:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLA------------------
        MEE+RSAME+ +D +ADLV+KLS ELR+G +PA DNF+GFFHAIDWKEPW+MGL+ FH LLL++T+ +R+H NF MFLFLLA                  
Subjt:  MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLA------------------

Query:  -------LAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED
               +AGVYFAE +NR L KNWK+F+TQNYFD NGVFLSTLWSGPL       LINTLF+LCYL+V+WKRAELR+RARL+ TKE+
Subjt:  -------LAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLWSGPL-------LINTLFTLCYLVVRWKRAELRNRARLSQTKED

Sequences

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CDS sequence

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ATGGAGGAGTTGAGATCTGCAATGGAAGAACATATGGATCAAATGGCGGATCTGGTTCAGAAACTTTCCTCCGAACTCCGATCTGGTCTCCGTCCGGCTGTCGATAATTT
CATCGGTTTCTTCCACGCCATTGACTGGAAGGAACCTTGGTTGATGGGGTTATTAGGTTTTCATGGATTGTTGCTGATAATTACCATCTTTACCAGGAAGCACACGAACT
TTCAGATGTTCTTGTTTCTTCTTGCACTAGCTGGTGTATATTTTGCTGAGAGAATCAATAGAATCTTGAGCAAAAACTGGAAGAATTTTGCCACCCAGAACTATTTTGAT
CCAAATGGAGTTTTCCTTTCAACACTCTGGTCTGGGCCACTGCTCATAAACACACTTTTCACCTTATGCTATCTAGTAGTCAGGTGGAAAAGAGCTGAGCTTCGAAATCG
AGCACGACTTTCACAGACTAAAGAAGACTAA

mRNA sequence

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Protein sequence

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MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGLLLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFD
PNGVFLSTLWSGPLLINTLFTLCYLVVRWKRAELRNRARLSQTKED

Carg19571 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome