; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg19575 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19575
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionbinding partner of ACD11 1
Genome locationCarg_Chr03:3313839..3318746
RNA-Seq ExpressionCarg19575
SyntenyCarg19575
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034360 - Vip1-like, RNA recognition motif, plant
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652335.1 hypothetical protein Csa_022102 [Cucumis sativus]1.2e-12692.11Show/hide
Query:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
        +QSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAEN+VPRREMQEVR  DNAA LT
Subjt:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT

Query:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE
        KTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE
Subjt:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE

KAG7033660.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma]5.4e-167100Show/hide
Query:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
        MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
Subjt:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT

Query:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEVGGSFGDEDGKEDENEVSGLDDEVGRFEADIRGR
        KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEVGGSFGDEDGKEDENEVSGLDDEVGRFEADIRGR
Subjt:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEVGGSFGDEDGKEDENEVSGLDDEVGRFEADIRGR

Query:  GKGLAGVVSVVVAIGGRQRR
        GKGLAGVVSVVVAIGGRQRR
Subjt:  GKGLAGVVSVVVAIGGRQRR

XP_004151849.1 binding partner of ACD11 1 [Cucumis sativus]5.5e-12792.48Show/hide
Query:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
        MQSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAEN+VPRREMQEVR  DNAA LT
Subjt:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT

Query:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE
        KTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE
Subjt:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE

XP_022950330.1 binding partner of ACD11 1 [Cucurbita moschata]1.7e-136100Show/hide
Query:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
        MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
Subjt:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT

Query:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
        KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
Subjt:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK

XP_038881171.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]1.7e-12893.98Show/hide
Query:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
        MQSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSIS AEN+VPRREMQEVR VDNAA LT
Subjt:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT

Query:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNFPS EDSASQPSSG+MYVNRAQ VVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQ LHVSD
Subjt:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE
        KTMAAIFAAERK+NDTGSAVKTSKYVT+GAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE
Subjt:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE

TrEMBL top hitse value%identityAlignment
A0A0A0LNE8 RRM domain-containing protein2.7e-12792.48Show/hide
Query:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
        MQSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAEN+VPRREMQEVR  DNAA LT
Subjt:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT

Query:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PSIEDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE
        KTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE
Subjt:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE

A0A1S3CIA3 binding partner of ACD11 1-like5.0e-12691.73Show/hide
Query:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
        MQSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAEN+VPRRE+QEVR  DNAA LT
Subjt:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT

Query:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PS EDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE
        KTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE
Subjt:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE

A0A5D3BPG7 Binding partner of ACD11 1-like5.0e-12691.73Show/hide
Query:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
        MQSQTRTVQ ++VSDLATEREIHEFFSFSGEIEH+EIQCEQG+SKTAFVTF DPKALEIALLLSGATIVD+IVSI+PAEN+VPRRE+QEVR  DNAA LT
Subjt:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT

Query:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENN PS EDSASQPSSG+MYVNRAQEVVA+VLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDR+VGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE
        KTMAAIFAAERK+NDTGSAVKTSKYVT+ AAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL SKE
Subjt:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE

A0A6J1GFF4 binding partner of ACD11 18.3e-137100Show/hide
Query:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
        MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
Subjt:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT

Query:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
        KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
Subjt:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK

A0A6J1IKN1 binding partner of ACD11 18.3e-137100Show/hide
Query:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
        MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
Subjt:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT

Query:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
        PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
Subjt:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
        KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK
Subjt:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK

SwissProt top hitse value%identityAlignment
P87216 Protein vip15.6e-0521.8Show/hide
Query:  NVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIED
        N+S   TE++I +FFSF G++ ++  + + G+++TA + F  P A + ALLL  A +    + I+                 ++    + T+      + 
Subjt:  NVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIED

Query:  SASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAER
        +A Q    R        +++ +L++G  +    + K+   D+ + +++             G+ E    G+  VNE+    ++   V +K     FA   
Subjt:  SASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAER

Query:  KINDTGSAVKT
        K+N T S V T
Subjt:  KINDTGSAVKT

Q9LFD5 Binding partner of ACD11 18.2e-4944.09Show/hide
Query:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
        M SQ R+V+  N+S  ATE +I EFFSFSGE+E ++IQ  +    +A+VTF++ +  E A+LLSGA+I DQ V I  A NY P                 
Subjt:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT

Query:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
              P+   + +Q S     V +A++VV+S+LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+K+GL++KLT G S+VNEK+K+VDQ   V++
Subjt:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREK
        +T +   AAE+ ++  GSAV  ++YV +G +W  GAF +VA+A    G KT+EK
Subjt:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.3e-5448.02Show/hide
Query:  TVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNF
        TV+  NVS  AT+R++ EFFSFSG+I ++E Q E  ++K A+VTF+D +  E A+LLSGATIVD  V +S A +Y    E          A L P     
Subjt:  TVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNF

Query:  PSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI
           +DS   P +G   + +A++VV+S+LAKG  +G+DA+ KAK+ DEKHQLT++ASAKV SFD+K+G T+K+  G  VV EKV+ VDQK  VS+KT +AI
Subjt:  PSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAI

Query:  FAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLA
         AAE+ +++ GSA+  ++YV +GA W+ GAF KVAKA +  G K +EK  +A
Subjt:  FAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLA

AT5G16840.1 binding partner of acd11 15.8e-5044.09Show/hide
Query:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
        M SQ R+V+  N+S  ATE +I EFFSFSGE+E ++IQ  +    +A+VTF++ +  E A+LLSGA+I DQ V I  A NY P                 
Subjt:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT

Query:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
              P+   + +Q S     V +A++VV+S+LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+K+GL++KLT G S+VNEK+K+VDQ   V++
Subjt:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREK
        +T +   AAE+ ++  GSAV  ++YV +G +W  GAF +VA+A    G KT+EK
Subjt:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREK

AT5G16840.2 binding partner of acd11 14.4e-5044.49Show/hide
Query:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT
        M SQ R+V+  N+S  ATE +I EFFSFSGE+E ++IQ     S  A+VTF++ +  E A+LLSGA+I DQ V I  A NY P                 
Subjt:  MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLT

Query:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD
              P+   + +Q S     V +A++VV+S+LAKG  +G+DA+ KAKAFDEKH  T++A+A V S D+K+GL++KLT G S+VNEK+K+VDQ   V++
Subjt:  PTENNFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSD

Query:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREK
        +T +   AAE+ ++  GSAV  ++YV +G +W  GAF +VA+A    G KT+EK
Subjt:  KTMAAIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREK

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein8.0e-10073.66Show/hide
Query:  TRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTEN
        TR+VQ  NVSDLATEREIHEFFSFSG+IEH+EIQ E GQS+ AFVTF DPKALEIALLLSGATIVDQIV+I+ AENYV RRE QEVR +DNA PL   E+
Subjt:  TRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTEN

Query:  NFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMA
           + +   +   + R YV++AQ+VVA+VLAKGSA+GQDA+NKAKAFDEKHQL A+ASAKV SFD++VGLTEKL+VGIS VNEKVKSVDQKL VSDKTMA
Subjt:  NFPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMA

Query:  AIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE
        AIFAAERK+NDTGSAVK+S+YVT+GAAW +GAF KVA+ GQ AG+KT+EKF+LA+SN++SK+
Subjt:  AIFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-5143.48Show/hide
Query:  TVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENY-VPRREMQEVRAVDNAAPLTPTENN
        TV+  NVS  ATER++ EFFSFSG+I ++E Q E   SK A+VTF+D +  E A+LL+G+TIVD  V+++ + +Y +P   +  + ++  +      +++
Subjt:  TVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENY-VPRREMQEVRAVDNAAPLTPTENN

Query:  FPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAA
         P+ ED +           +A++VV+ +++KG  +G+DA+ KAK+ DEKHQLT++ASA+V SFD+++G TEK+  G +VV+EKVK VDQK  V++KT +A
Subjt:  FPSIEDSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAA

Query:  IFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLA
        I AAE+ +++ GSA+  ++YV +GA W+ GAF +V+KA +  G K +EK  LA
Subjt:  IFAAERKINDTGSAVKTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTCAGACGCGGACGGTTCAAGCCAGGAACGTGTCGGATCTAGCTACTGAGAGGGAGATTCATGAGTTCTTCTCCTTTTCTGGAGAGATTGAGCACGTAGAAAT
CCAATGTGAGCAGGGGCAATCGAAGACTGCGTTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGTGCAACAATTGTAGATCAGATAGTGA
GCATATCTCCTGCAGAAAATTATGTACCGAGAAGAGAAATGCAGGAAGTACGGGCTGTGGACAATGCTGCACCTCTCACTCCTACAGAAAATAATTTTCCTAGCATCGAG
GATTCTGCGAGCCAGCCTAGCAGTGGAAGAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAAGTGTGCTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAA
GGCTAAAGCATTTGATGAAAAACATCAGTTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAAGGTTGGGCTCACAGAGAAATTGACAGTTGGGATTTCGG
TGGTTAACGAGAAAGTCAAGTCTGTAGATCAAAAGCTTCATGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAAATCAACGACACAGGATCTGCTGTC
AAAACAAGCAAGTATGTGACGTCGGGTGCTGCTTGGCTAAACGGTGCTTTTGGCAAGGTTGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAATTCCATTT
GGCTATGTCGAACTTAACCTCAAAGGAAGTGGGTGGAAGCTTTGGAGATGAAGATGGCAAAGAAGATGAGAATGAGGTAAGCGGTCTTGACGATGAGGTTGGGCGGTTTG
AAGCGGACATTAGAGGCAGGGGAAAGGGTCTTGCTGGAGTTGTTAGCGTCGTCGTTGCCATTGGTGGGCGACAAAGGAGGTGA
mRNA sequenceShow/hide mRNA sequence
TTTCAAATTCCCTCTAAGCTCCCACCTCTGCAAGTTTCTCTCTACTTTCTCTCTCTACAAGAAATCGCCGAGTTCTTCGATTATTCGCCATGCAGTCTCAGACGCGGACG
GTTCAAGCCAGGAACGTGTCGGATCTAGCTACTGAGAGGGAGATTCATGAGTTCTTCTCCTTTTCTGGAGAGATTGAGCACGTAGAAATCCAATGTGAGCAGGGGCAATC
GAAGACTGCGTTCGTGACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGTTGTTATCGGGTGCAACAATTGTAGATCAGATAGTGAGCATATCTCCTGCAGAAAATT
ATGTACCGAGAAGAGAAATGCAGGAAGTACGGGCTGTGGACAATGCTGCACCTCTCACTCCTACAGAAAATAATTTTCCTAGCATCGAGGATTCTGCGAGCCAGCCTAGC
AGTGGAAGAATGTATGTTAATAGAGCACAAGAAGTAGTTGCAAGTGTGCTTGCTAAAGGTTCAGCAATTGGACAAGATGCCATGAACAAGGCTAAAGCATTTGATGAAAA
ACATCAGTTAACAGCTAGTGCATCTGCAAAGGTATTATCCTTTGACAGAAAGGTTGGGCTCACAGAGAAATTGACAGTTGGGATTTCGGTGGTTAACGAGAAAGTCAAGT
CTGTAGATCAAAAGCTTCATGTTTCAGATAAAACAATGGCTGCAATCTTCGCAGCTGAGAGGAAAATCAACGACACAGGATCTGCTGTCAAAACAAGCAAGTATGTGACG
TCGGGTGCTGCTTGGCTAAACGGTGCTTTTGGCAAGGTTGCAAAAGCAGGGCAGGCAGCAGGTACAAAAACCAGAGAGAAATTCCATTTGGCTATGTCGAACTTAACCTC
AAAGGAAGTGGGTGGAAGCTTTGGAGATGAAGATGGCAAAGAAGATGAGAATGAGGTAAGCGGTCTTGACGATGAGGTTGGGCGGTTTGAAGCGGACATTAGAGGCAGGG
GAAAGGGTCTTGCTGGAGTTGTTAGCGTCGTCGTTGCCATTGGTGGGCGACAAAGGAGGTGA
Protein sequenceShow/hide protein sequence
MQSQTRTVQARNVSDLATEREIHEFFSFSGEIEHVEIQCEQGQSKTAFVTFRDPKALEIALLLSGATIVDQIVSISPAENYVPRREMQEVRAVDNAAPLTPTENNFPSIE
DSASQPSSGRMYVNRAQEVVASVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRKVGLTEKLTVGISVVNEKVKSVDQKLHVSDKTMAAIFAAERKINDTGSAV
KTSKYVTSGAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSKEVGGSFGDEDGKEDENEVSGLDDEVGRFEADIRGRGKGLAGVVSVVVAIGGRQRR