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Carg19599 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19599
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionsignal recognition particle 19 kDa protein
Genome locationCarg_Chr14:11613848..11616259
RNA-Seq ExpressionCarg19599
SyntenyCarg19599
Gene Ontology termsGO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0004386 - helicase activity (molecular function)
GO:0008312 - 7S RNA binding (molecular function)
InterPro domainsIPR002778 - Signal recognition particle, SRP19 subunit
IPR036521 - Signal recognition particle, subunit SRP19-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582147.1 Signal recognition particle 19 kDa protein, partial [Cucurbita argyrosperma subsp. sororia]2.2e-69100Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
        MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI

Query:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK

XP_022955603.1 signal recognition particle 19 kDa protein [Cucurbita moschata]2.2e-69100Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
        MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI

Query:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK

XP_022979984.1 signal recognition particle 19 kDa protein [Cucurbita maxima]2.9e-6999.25Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI

Query:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK

XP_023526150.1 signal recognition particle 19 kDa protein [Cucurbita pepo subsp. pepo]3.7e-6999.25Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
        MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQ+MLRI
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI

Query:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK

XP_038879562.1 signal recognition particle 19 kDa protein [Benincasa hispida]9.2e-6897.76Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI

Query:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGR KKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK

TrEMBL top hitse value%identityAlignment
A0A0A0L5F9 Uncharacterized protein8.4e-6796.27Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI

Query:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGR KKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK

A0A1S3AYC2 signal recognition particle 19 kDa protein2.9e-6796.27Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDGTLSNPAI SRKQLMLR+
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI

Query:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGR KKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK

A0A6J1CAM2 signal recognition particle 19 kDa protein2.5e-6695.56Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
        MDGE+PNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAI SRKQ+MLRI
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI

Query:  AELVPRHPGRIKKQEPASSSTAGPSK-GKGGRKKK
        AELVPRHPGR KKQEPASSSTAGPSK GKGGRKKK
Subjt:  AELVPRHPGRIKKQEPASSSTAGPSK-GKGGRKKK

A0A6J1GUF8 signal recognition particle 19 kDa protein1.1e-69100Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
        MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI

Query:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK

A0A6J1IY39 signal recognition particle 19 kDa protein1.4e-6999.25Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI

Query:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK
        AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRIKKQEPASSSTAGPSKGKGGRKKK

SwissProt top hitse value%identityAlignment
P09132 Signal recognition particle 19 kDa protein1.1e-2349.62Show/hide
Query:  RWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRV LK+EDG+L     PSRK +ML  AE++P
Subjt:  RWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRIAELVP

Query:  RHPGRIKKQEPASSST---AGPSKGKGGRKK
        +   R +K   A  S     G  KGKG +KK
Subjt:  RHPGRIKKQEPASSST---AGPSKGKGGRKK

P49964 Signal recognition particle 19 kDa protein6.9e-5073.44Show/hide
Query:  NIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRIAELVPR
        +IK+W V+YPVY+NSKKT+AEGRRI   KAC +PTC EI DCCSHLK+P AIE+DKAYPRDF Q GRVRV LKK+DG+  NPAI ++KQLM++IAELVP+
Subjt:  NIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRIAELVPR

Query:  HPGRIKKQEPASSSTAGPSKGKGGRKKK
        H GR KKQEPA+SSTAG SKGKGG+KKK
Subjt:  HPGRIKKQEPASSSTAGPSKGKGGRKKK

Q5RBR1 Signal recognition particle 19 kDa protein1.1e-2349.62Show/hide
Query:  RWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRV LK+EDG+L     PSRK +ML  AE++P
Subjt:  RWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRIAELVP

Query:  RHPGRIKKQEPASSST---AGPSKGKGGRKK
        +   R +K   A  S     G  KGKG +KK
Subjt:  RHPGRIKKQEPASSST---AGPSKGKGGRKK

Q943Z6 Signal recognition particle 19 kDa protein1.2e-4969.66Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
        MD    NIK+WVV+YPVYINSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EIDKAYPRDFMQ GRVRV LK+EDGTL NPAI SRK LM +I
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI

Query:  AELVPRHPGRIKKQE---------PASSSTAGPS--KGKGGRKKK
        AELVPRHP R+KKQE          A++ST+G S   GKGG+KK+
Subjt:  AELVPRHPGRIKKQE---------PASSSTAGPS--KGKGGRKKK

Q9D7A6 Signal recognition particle 19 kDa protein5.0e-2448.85Show/hide
Query:  RWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRV LK+EDG+L     PSRK +ML +AE++P
Subjt:  RWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRIAELVP

Query:  RHPGRIKKQ---EPASSSTAGPSKGKGGRKK
        +   R +K    +P      G  KGKG +KK
Subjt:  RHPGRIKKQ---EPASSSTAGPSKGKGGRKK

Arabidopsis top hitse value%identityAlignment
AT1G48160.1 signal recognition particle 19 kDa protein, putative / SRP19, putative8.4e-5169.66Show/hide
Query:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI
        MD    NIK+WVV+YPVYINSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EIDKAYPRDFMQ GRVRV LK+EDGTL NPAI SRK LM +I
Subjt:  MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRI

Query:  AELVPRHPGRIKKQE---------PASSSTAGPS--KGKGGRKKK
        AELVPRHP R+KKQE          A++ST+G S   GKGG+KK+
Subjt:  AELVPRHPGRIKKQE---------PASSSTAGPS--KGKGGRKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAGAAATCCCCAACATAAAGAGATGGGTAGTTTTGTATCCCGTCTATATTAATTCAAAGAAGACAATAGCTGAAGGAAGACGTATCGGTGTTAGCAAAGCATG
TGAGAATCCAACGTGTGCTGAGATTGGTGATTGCTGCAGTCATCTCAAACTGCCCTTTGCTATTGAGATTGATAAAGCTTATCCTCGTGATTTCATGCAACGAGGGAGAG
TGCGGGTTCTGCTGAAGAAGGAGGATGGAACTCTGTCAAATCCAGCTATTCCTTCCAGAAAACAACTGATGCTTCGTATAGCCGAACTTGTTCCTAGACATCCTGGGAGG
ATAAAGAAGCAGGAGCCTGCATCATCATCAACTGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
CTCGGCGTCGCCCCATTTTCCGATTCTCTCTTTTTTCCTGTTTCGCTCAATCTCGCCCATTGTCGCGGTTCGGCTGGAACAGAAAATCAGATCTCCTTTTAGCTTCTCAA
TTTGGAATCTGGTTGGAACATGGATGGAGAAATCCCCAACATAAAGAGATGGGTAGTTTTGTATCCCGTCTATATTAATTCAAAGAAGACAATAGCTGAAGGAAGACGTA
TCGGTGTTAGCAAAGCATGTGAGAATCCAACGTGTGCTGAGATTGGTGATTGCTGCAGTCATCTCAAACTGCCCTTTGCTATTGAGATTGATAAAGCTTATCCTCGTGAT
TTCATGCAACGAGGGAGAGTGCGGGTTCTGCTGAAGAAGGAGGATGGAACTCTGTCAAATCCAGCTATTCCTTCCAGAAAACAACTGATGCTTCGTATAGCCGAACTTGT
TCCTAGACATCCTGGGAGGATAAAGAAGCAGGAGCCTGCATCATCATCAACTGCAGGACCTTCAAAAGGCAAGGGTGGAAGAAAGAAGAAATAACTGCATTATGTAATTG
CAAGAACCAGATTGTTAGCAACCAGGCAAGCAGTTTCGTTTTTTAGGTCTTATTTCTTAATTCTT
Protein sequenceShow/hide protein sequence
MDGEIPNIKRWVVLYPVYINSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAIPSRKQLMLRIAELVPRHPGR
IKKQEPASSSTAGPSKGKGGRKKK