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Carg19607 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19607
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionStress-response A/B barrel domain-containing protein
Genome locationCarg_Chr14:11720238..11723601
RNA-Seq ExpressionCarg19607
SyntenyCarg19607
Gene Ontology termsGO:0009865 - pollen tube adhesion (biological process)
InterPro domainsIPR011008 - Dimeric alpha-beta barrel
IPR013097 - Stress responsive alpha-beta barrel
IPR044662 - Stress-response A/B barrel domain-containing protein HS1/DABB1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137755.1 stress-response A/B barrel domain-containing protein HS1 [Momordica charantia]5.1e-4889.91Show/hide
Query:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
        ME  K IVKHILLAKFKD ITE+QID+LIKGYANL+NLIEPMKAFQCGKDVSIENLHQGFTHVFESTFEST+GIAEY+SHPAHVEFANLFLASLDKVIVI
Subjt:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI

Query:  DYKATIIHS
        DYK T+IHS
Subjt:  DYKATIIHS

XP_022955948.1 stress-response A/B barrel domain-containing protein HS1 [Cucurbita moschata]1.1e-5399.08Show/hide
Query:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
        MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
Subjt:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI

Query:  DYKATIIHS
        DYKAT+IHS
Subjt:  DYKATIIHS

XP_022979995.1 stress-response A/B barrel domain-containing protein HS1 [Cucurbita maxima]6.2e-54100Show/hide
Query:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
        MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
Subjt:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI

Query:  DYKATIIHS
        DYKATIIHS
Subjt:  DYKATIIHS

XP_023527594.1 stress-response A/B barrel domain-containing protein HS1 [Cucurbita pepo subsp. pepo]4.0e-5398.17Show/hide
Query:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
        MEEPKGIVKHILLAKFKDGI EEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKV+VI
Subjt:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI

Query:  DYKATIIHS
        DYKATIIHS
Subjt:  DYKATIIHS

XP_038893347.1 stress-response A/B barrel domain-containing protein HS1-like [Benincasa hispida]1.7e-4889.91Show/hide
Query:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
        M E KG+VKHILLAKFKD ITEEQID+LIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFEST+GIAEYVSHPAHVE+ANLFL+SLDKVIVI
Subjt:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI

Query:  DYKATIIHS
        DYK T+IH+
Subjt:  DYKATIIHS

TrEMBL top hitse value%identityAlignment
A0A0A0L972 Stress-response A/B barrel domain-containing protein4.6e-4788.79Show/hide
Query:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
        M + KG+VKHILLAKFK+GI+EEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFEST+GIAEY+SHPAHVEFAN FL+SLDKVIVI
Subjt:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI

Query:  DYKATII
        DYK T+I
Subjt:  DYKATII

A0A1S3AYB2 stress-response A/B barrel domain-containing protein HS11.2e-4789.72Show/hide
Query:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
        M E KG+VKHILLAKFKDGI EEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFEST+GIAEY+SHPAHVEFAN FL+SLDKVIVI
Subjt:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI

Query:  DYKATII
        DYK T++
Subjt:  DYKATII

A0A6J1C7K4 stress-response A/B barrel domain-containing protein HS12.4e-4889.91Show/hide
Query:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
        ME  K IVKHILLAKFKD ITE+QID+LIKGYANL+NLIEPMKAFQCGKDVSIENLHQGFTHVFESTFEST+GIAEY+SHPAHVEFANLFLASLDKVIVI
Subjt:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI

Query:  DYKATIIHS
        DYK T+IHS
Subjt:  DYKATIIHS

A0A6J1GVE7 stress-response A/B barrel domain-containing protein HS15.1e-5499.08Show/hide
Query:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
        MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
Subjt:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI

Query:  DYKATIIHS
        DYKAT+IHS
Subjt:  DYKATIIHS

A0A6J1IUX3 stress-response A/B barrel domain-containing protein HS13.0e-54100Show/hide
Query:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
        MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
Subjt:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI

Query:  DYKATIIHS
        DYKATIIHS
Subjt:  DYKATIIHS

SwissProt top hitse value%identityAlignment
I6WU39 Olivetolic acid cyclase9.3e-2147.37Show/hide
Query:  VKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVIDY
        VKH+++ KFKD ITE Q ++  K Y NLVN+I  MK    GKDV+ +N  +G+TH+ E TFES E I +Y+ HPAHV F +++ +  +K+++ DY
Subjt:  VKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVIDY

Q9FK81 Stress-response A/B barrel domain-containing protein At5g225809.7e-1840.2Show/hide
Query:  KHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKD-VSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVIDYKATII
        KH+++ KFK+   + ++D+++KG  NLV+ I+ +K+F+ G+D  S + L QGFTH F  TFE+ +G   + SHP HVEF+  F A +DK++++D+    +
Subjt:  KHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKD-VSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVIDYKATII

Query:  HS
         S
Subjt:  HS

Q9LUV2 Stress-response A/B barrel domain-containing protein HS16.6e-4375.7Show/hide
Query:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
        MEE KG VKH+LLA FKDG++ E+I++LIKGYANLVNLIEPMKAF  GKDVSIENLHQG+TH+FESTFES E +AEY++HPAHVEFA +FL SLDKV+VI
Subjt:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI

Query:  DYKATII
        DYK T +
Subjt:  DYKATII

Q9SIP1 Stress-response A/B barrel domain-containing protein UP31.2e-0430.77Show/hide
Query:  IVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQ-----GFTHVFESTFESTEGIAEYVSHPAHVEFA-NLFLASLDKVIVI
        I++HI+L K KD     +I  +I     L  L + +        +S   LH+      FTHV  S +ES E +A Y +HP HV       L   D ++ +
Subjt:  IVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQ-----GFTHVFESTFESTEGIAEYVSHPAHVEFA-NLFLASLDKVIVI

Query:  DYKA
        D+ A
Subjt:  DYKA

Arabidopsis top hitse value%identityAlignment
AT2G31670.1 Stress responsive alpha-beta barrel domain protein8.7e-0630.77Show/hide
Query:  IVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQ-----GFTHVFESTFESTEGIAEYVSHPAHVEFA-NLFLASLDKVIVI
        I++HI+L K KD     +I  +I     L  L + +        +S   LH+      FTHV  S +ES E +A Y +HP HV       L   D ++ +
Subjt:  IVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQ-----GFTHVFESTFESTEGIAEYVSHPAHVEFA-NLFLASLDKVIVI

Query:  DYKA
        D+ A
Subjt:  DYKA

AT3G17210.1 heat stable protein 14.7e-4475.7Show/hide
Query:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI
        MEE KG VKH+LLA FKDG++ E+I++LIKGYANLVNLIEPMKAF  GKDVSIENLHQG+TH+FESTFES E +AEY++HPAHVEFA +FL SLDKV+VI
Subjt:  MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVI

Query:  DYKATII
        DYK T +
Subjt:  DYKATII

AT5G22580.1 Stress responsive A/B Barrel Domain6.9e-1940.2Show/hide
Query:  KHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKD-VSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVIDYKATII
        KH+++ KFK+   + ++D+++KG  NLV+ I+ +K+F+ G+D  S + L QGFTH F  TFE+ +G   + SHP HVEF+  F A +DK++++D+    +
Subjt:  KHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKD-VSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVIDYKATII

Query:  HS
         S
Subjt:  HS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAACCGAAAGGCATTGTGAAGCACATTTTGCTGGCGAAATTCAAAGATGGAATCACAGAGGAACAAATCGACCAACTCATCAAGGGATATGCCAATCTCGTCAA
TCTCATTGAACCTATGAAGGCTTTCCAGTGCGGTAAGGATGTTAGCATTGAAAATCTACACCAAGGTTTCACTCACGTCTTTGAATCCACATTTGAGAGTACAGAAGGCA
TAGCAGAATATGTATCTCATCCAGCGCATGTGGAATTCGCAAATTTGTTCCTTGCATCCTTGGACAAAGTTATCGTCATCGACTACAAAGCGACCATAATTCATAGCTAA
mRNA sequenceShow/hide mRNA sequence
TTTCTTTTCTCGGAAAGTGCCCTAACTGGTTTGAAGTGATGGAGGAACCGAAAGGCATTGTGAAGCACATTTTGCTGGCGAAATTCAAAGATGGAATCACAGAGGAACAA
ATCGACCAACTCATCAAGGGATATGCCAATCTCGTCAATCTCATTGAACCTATGAAGGCTTTCCAGTGCGGTAAGGATGTTAGCATTGAAAATCTACACCAAGGTTTCAC
TCACGTCTTTGAATCCACATTTGAGAGTACAGAAGGCATAGCAGAATATGTATCTCATCCAGCGCATGTGGAATTCGCAAATTTGTTCCTTGCATCCTTGGACAAAGTTA
TCGTCATCGACTACAAAGCGACCATAATTCATAGCTAATTTGGAGCCTAAAATTATGGCTGCTTTATAATACTGTCTTGTGGAATAAATAAATGTAAGCCCTTTTTCCAC
CATAATCTTAGATGATGGTTCTACTTGAAGGCTTTGTTATTATCAATTTATTTGTATACCCTGTTATCAAAGTGATTGCTTGGGTTTCTAATCATTGTGTTCTAATTCAC
GTTTTGCTGAACGCAGCAGACTGCACGACAATTTAAGCATTTCATGTTATTTGAAACTCGGGTATAAAAAGTACAACATTATTGTAACCATTCCAAAATGTAAGCTGAAA
AACAGCAAATCGGTATTCGAAACACTTCGAACCCTTCAATGAAGAGAGTGATAAGGAAAAAAAAAAAATGGAAGAACGCTTGAATTGGCTTATATATGAATTGGCTTGTC
GTATGTTGCCATAGCAGCCTCCTTCAGTGCCTCACTCATTGTGGGATGTGCATGGCAAACGCGGGCTATGTCCTCACTTGAAGCGTCATATTG
Protein sequenceShow/hide protein sequence
MEEPKGIVKHILLAKFKDGITEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFESTFESTEGIAEYVSHPAHVEFANLFLASLDKVIVIDYKATIIHS