; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg19621 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19621
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:11815086..11817043
RNA-Seq ExpressionCarg19621
SyntenyCarg19621
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582170.1 hypothetical protein SDJN03_22172, partial [Cucurbita argyrosperma subsp. sororia]6.1e-0750Show/hide
Query:  GSRRRSIIGRREQRGVGG------------ELRNMDGMGSIGTGSRECNPSRGNLK------SLFPADGGTRNACIDDSTASSTGNNV
        GSRRRSIIGRREQRGVGG             L+  +    + +   E + S   LK       L+ +DGGTRNACIDDS ASSTGNNV
Subjt:  GSRRRSIIGRREQRGVGG------------ELRNMDGMGSIGTGSRECNPSRGNLK------SLFPADGGTRNACIDDSTASSTGNNV
KAG7018568.1 hypothetical protein SDJN02_20438 [Cucurbita argyrosperma subsp. argyrosperma]1.8e-59100Show/hide
Query:  MQYLHYSPPFCSQFHLRSAVLFFQRLLNGGSRRRSIIGRREQRGVGGELRNMDGMGSIGTGSRECNPSRGNLKSLFPADGGTRNACIDDSTASSTGNNVH
        MQYLHYSPPFCSQFHLRSAVLFFQRLLNGGSRRRSIIGRREQRGVGGELRNMDGMGSIGTGSRECNPSRGNLKSLFPADGGTRNACIDDSTASSTGNNVH
Subjt:  MQYLHYSPPFCSQFHLRSAVLFFQRLLNGGSRRRSIIGRREQRGVGGELRNMDGMGSIGTGSRECNPSRGNLKSLFPADGGTRNACIDDSTASSTGNNVH

Query:  LEQKIDVEKGAKPGTSYR
        LEQKIDVEKGAKPGTSYR
Subjt:  LEQKIDVEKGAKPGTSYR
XP_022956248.1 uncharacterized protein LOC111458000 [Cucurbita moschata]2.5e-2475.28Show/hide
Query:  PPFCSQFHLRSAVLFFQRLLNGGSRRRSIIGRREQRGVGG------------------ELRNMDGMGSIGTGSRECNPSRGNLKSLFPA
        P    QFHLRSAVLFFQRLLNGGSRRRSIIGRREQRGVGG                  ELRNMDGMGSIGTGSRECNPSRGNLKSLFPA
Subjt:  PPFCSQFHLRSAVLFFQRLLNGGSRRRSIIGRREQRGVGG------------------ELRNMDGMGSIGTGSRECNPSRGNLKSLFPA
TrEMBL top hitse value%identityAlignment
A0A6J1GWA2 uncharacterized protein LOC1114580001.2e-2475.28Show/hide
Query:  PPFCSQFHLRSAVLFFQRLLNGGSRRRSIIGRREQRGVGG------------------ELRNMDGMGSIGTGSRECNPSRGNLKSLFPA
        P    QFHLRSAVLFFQRLLNGGSRRRSIIGRREQRGVGG                  ELRNMDGMGSIGTGSRECNPSRGNLKSLFPA
Subjt:  PPFCSQFHLRSAVLFFQRLLNGGSRRRSIIGRREQRGVGG------------------ELRNMDGMGSIGTGSRECNPSRGNLKSLFPA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATATCTCCACTATTCCCCTCCATTCTGCTCACAGTTCCATCTCCGTTCCGCCGTGCTGTTCTTCCAGAGGCTCCTCAACGGTGGCTCTCGTCGCCGATCGATCAT
AGGACGGCGTGAACAGAGAGGCGTCGGAGGAGAGTTACGTAACATGGATGGCATGGGCAGCATTGGAACAGGATCAAGGGAATGCAATCCGAGTCGAGGAAATTTGAAAT
CTCTATTTCCAGCAGATGGAGGCACTCGAAACGCCTGCATAGACGACTCGACTGCCTCCTCTACTGGTAACAATGTGCATCTTGAACAGAAGATTGATGTAGAAAAAGGA
GCAAAACCAGGTACCAGTTATCGTTGA
mRNA sequenceShow/hide mRNA sequence
AGACGGTAATCAATCTCTTCTCTTCTTCTCCTTCAATCTCATCTCTTCCTCTCAAAATCCTTACTATCTATCGAAATACAGATGCAATATCTCCACTATTCCCCTCCATT
CTGCTCACAGTTCCATCTCCGTTCCGCCGTGCTGTTCTTCCAGAGGCTCCTCAACGGTGGCTCTCGTCGCCGATCGATCATAGGACGGCGTGAACAGAGAGGCGTCGGAG
GAGAGTTACGTAACATGGATGGCATGGGCAGCATTGGAACAGGATCAAGGGAATGCAATCCGAGTCGAGGAAATTTGAAATCTCTATTTCCAGCAGATGGAGGCACTCGA
AACGCCTGCATAGACGACTCGACTGCCTCCTCTACTGGTAACAATGTGCATCTTGAACAGAAGATTGATGTAGAAAAAGGAGCAAAACCAGGTACCAGTTATCGTTGA
Protein sequenceShow/hide protein sequence
MQYLHYSPPFCSQFHLRSAVLFFQRLLNGGSRRRSIIGRREQRGVGGELRNMDGMGSIGTGSRECNPSRGNLKSLFPADGGTRNACIDDSTASSTGNNVHLEQKIDVEKG
AKPGTSYR