; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg19623 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19623
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNucleic acid-binding proteins superfamily isoform 1
Genome locationCarg_Chr14:11825100..11828161
RNA-Seq ExpressionCarg19623
SyntenyCarg19623
Gene Ontology termsNA
InterPro domainsIPR035201 - Cell division control protein 24, OB domain 1
IPR035203 - Cell division control protein 24, OB domain 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049545.1 Nucleic acid-binding proteins superfamily isoform 1 [Cucumis melo var. makuwa]1.8e-2629.38Show/hide
Query:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF-------------------------------------------EID
        + FED+E+FDPNVNGTET+  GWS IASR LRTCIAYSSSVT AILLSELSQA+                                            I 
Subjt:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF-------------------------------------------EID

Query:  ASLE--LLDP--------------------------------------------------------------------IVVLL-----------------
        + LE  +LD                                                                     +V+LL                 
Subjt:  ASLE--LLDP--------------------------------------------------------------------IVVLL-----------------

Query:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------
                              IESIGPLEI+EKINGLRMIQI LVDND F LKF+                                            
Subjt:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------

Query:  ---------------------------------------------------------------SFVVDLQDKMTGISLYGKI------------------
                                                                       SFV+DLQDKMTGISLYG +                  
Subjt:  ---------------------------------------------------------------SFVVDLQDKMTGISLYGKI------------------

Query:  -----------------------GGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT
                                GHTV+IS LTCT NKNRLEALWIENHVGASFVN SCLP L +   L KLSRLSDLT
Subjt:  -----------------------GGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT

KAG6582173.1 hypothetical protein SDJN03_22175, partial [Cucurbita argyrosperma subsp. sororia]7.0e-4798.95Show/hide
Query:  IGGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHLKLSRLSDLTKQYSWYKGPLESSNRPSPTGHLAERIYGSRTSISFGDQ
        IGGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHLKLSRLSDLTKQYSWYKGPLESSNRPSP GHLAERIYGSRTSISFGDQ
Subjt:  IGGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHLKLSRLSDLTKQYSWYKGPLESSNRPSPTGHLAERIYGSRTSISFGDQ

KAG7018570.1 hypothetical protein SDJN02_20440 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-125100Show/hide
Query:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAFEIDASLELLDPIVVLLIESIGPLEIYEKINGLRMIQISLVDNDDFN
        MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAFEIDASLELLDPIVVLLIESIGPLEIYEKINGLRMIQISLVDNDDFN
Subjt:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAFEIDASLELLDPIVVLLIESIGPLEIYEKINGLRMIQISLVDNDDFN

Query:  LKFISFVVDLQDKMTGISLYGKIGGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHLKLSRLSDLTKQYSWYKGPLESSNRPSPTGH
        LKFISFVVDLQDKMTGISLYGKIGGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHLKLSRLSDLTKQYSWYKGPLESSNRPSPTGH
Subjt:  LKFISFVVDLQDKMTGISLYGKIGGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHLKLSRLSDLTKQYSWYKGPLESSNRPSPTGH

Query:  LAERIYGSRTSISFGDQEHNSELKEEDRQMWK
        LAERIYGSRTSISFGDQEHNSELKEEDRQMWK
Subjt:  LAERIYGSRTSISFGDQEHNSELKEEDRQMWK

XP_008438949.1 PREDICTED: uncharacterized protein LOC103483891 isoform X2 [Cucumis melo]1.8e-2629.38Show/hide
Query:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF--------------------------------EIDASLE-------
        + FED+E+FDPNVNGTET+  GWS IASR LRTCIAYSSSVT AILLSELSQA+                                 ID+  E       
Subjt:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF--------------------------------EIDASLE-------

Query:  ------LLDP--------------------------------------------------------------------IVVLL-----------------
              +LD                                                                     +V+LL                 
Subjt:  ------LLDP--------------------------------------------------------------------IVVLL-----------------

Query:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------
                              IESIGPLEI+EKINGLRMIQI LVDND F LKF+                                            
Subjt:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------

Query:  ---------------------------------------------------------------SFVVDLQDKMTGISLYGKI------------------
                                                                       SFV+DLQDKMTGISLYG +                  
Subjt:  ---------------------------------------------------------------SFVVDLQDKMTGISLYGKI------------------

Query:  -----------------------GGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT
                                GHTV+IS LTCT NKNRLEALWIENHVGASFVN SCLP L +   L KLSRLSDLT
Subjt:  -----------------------GGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT

XP_022938337.1 uncharacterized protein LOC111444466 [Cucurbita moschata]1.7e-2428.96Show/hide
Query:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAFE---------------------------------------------
        + FEDEE+FDPNV GTET   GWS IASR LRTCIAYSSSVT AILLSELSQA+                                              
Subjt:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAFE---------------------------------------------

Query:  -------------------------------IDASL------------------------------------------------ELLDPIVVLL------
                                       ID  L                                                E  D  V+LL      
Subjt:  -------------------------------IDASL------------------------------------------------ELLDPIVVLL------

Query:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------
                              IESIGP+EI+EK NGL+MIQISL+DND F LKF+                                            
Subjt:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------

Query:  ---------------------------------------------------------------SFVVDLQDKMTGISLY---------------------
                                                                       SFVVDLQDKMTGISLY                     
Subjt:  ---------------------------------------------------------------SFVVDLQDKMTGISLY---------------------

Query:  -------------------GKIG-GHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT
                           G++G GHTVYIS LTCTI KN LEALWIENHVGASFVN SCLP L +   L K+SRLSDLT
Subjt:  -------------------GKIG-GHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT

TrEMBL top hitse value%identityAlignment
A0A0A0L5D2 Uncharacterized protein8.1e-2528.12Show/hide
Query:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF--------------------------------EIDASLE-------
        + FED+E+FDPN+NGTET+  GW+ IASR LRTC+AYSSSVT AILLSELSQA+                                 ID+  E       
Subjt:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF--------------------------------EIDASLE-------

Query:  ------LLDP--------------------------------------------------------------------IVVLL-----------------
              +LD                                                                     +++LL                 
Subjt:  ------LLDP--------------------------------------------------------------------IVVLL-----------------

Query:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------
                              IESIGPLEI+E +NGLRMIQI LVDND F LKF+                                            
Subjt:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------

Query:  ---------------------------------------------------------------SFVVDLQDKMTGISLYGKI------------------
                                                                       SFV+DLQDKMTGISLYG +                  
Subjt:  ---------------------------------------------------------------SFVVDLQDKMTGISLYGKI------------------

Query:  -----------------------GGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT
                                GHTV+IS LTCT NKNRLEALWIENHVGASFVN SCLP L +   L KLSRLSDLT
Subjt:  -----------------------GGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT

A0A1S3AX73 uncharacterized protein LOC103483891 isoform X28.7e-2729.38Show/hide
Query:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF--------------------------------EIDASLE-------
        + FED+E+FDPNVNGTET+  GWS IASR LRTCIAYSSSVT AILLSELSQA+                                 ID+  E       
Subjt:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF--------------------------------EIDASLE-------

Query:  ------LLDP--------------------------------------------------------------------IVVLL-----------------
              +LD                                                                     +V+LL                 
Subjt:  ------LLDP--------------------------------------------------------------------IVVLL-----------------

Query:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------
                              IESIGPLEI+EKINGLRMIQI LVDND F LKF+                                            
Subjt:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------

Query:  ---------------------------------------------------------------SFVVDLQDKMTGISLYGKI------------------
                                                                       SFV+DLQDKMTGISLYG +                  
Subjt:  ---------------------------------------------------------------SFVVDLQDKMTGISLYGKI------------------

Query:  -----------------------GGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT
                                GHTV+IS LTCT NKNRLEALWIENHVGASFVN SCLP L +   L KLSRLSDLT
Subjt:  -----------------------GGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT

A0A5A7U7H0 Nucleic acid-binding proteins superfamily isoform 18.7e-2729.38Show/hide
Query:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF-------------------------------------------EID
        + FED+E+FDPNVNGTET+  GWS IASR LRTCIAYSSSVT AILLSELSQA+                                            I 
Subjt:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF-------------------------------------------EID

Query:  ASLE--LLDP--------------------------------------------------------------------IVVLL-----------------
        + LE  +LD                                                                     +V+LL                 
Subjt:  ASLE--LLDP--------------------------------------------------------------------IVVLL-----------------

Query:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------
                              IESIGPLEI+EKINGLRMIQI LVDND F LKF+                                            
Subjt:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------

Query:  ---------------------------------------------------------------SFVVDLQDKMTGISLYGKI------------------
                                                                       SFV+DLQDKMTGISLYG +                  
Subjt:  ---------------------------------------------------------------SFVVDLQDKMTGISLYGKI------------------

Query:  -----------------------GGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT
                                GHTV+IS LTCT NKNRLEALWIENHVGASFVN SCLP L +   L KLSRLSDLT
Subjt:  -----------------------GGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT

A0A6J1CC75 uncharacterized protein LOC111009381 isoform X31.5e-2327.9Show/hide
Query:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF-------------------------------------------EID
        + FEDEE++DPNVNG ET+A GWS IASR L+TCIAYSS+VT AILLSELSQA+                                            + 
Subjt:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF-------------------------------------------EID

Query:  ASLELL---------------------------------------------------------------------------------DPIVVLL------
        + LE +                                                                                 D  V+LL      
Subjt:  ASLELL---------------------------------------------------------------------------------DPIVVLL------

Query:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------
                              IESIGPL ++EKIN ++ IQI LVDND   LKF+                                            
Subjt:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------

Query:  -------------------------------------------------SFVVDLQDKMTGISLYGKI--------------------------------
                                                         SFV+DLQDKMTGISLYG I                                
Subjt:  -------------------------------------------------SFVVDLQDKMTGISLYGKI--------------------------------

Query:  ---------GGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT
                  GHTVYIS LTCT NKNRLEALWIENHVGASFVN SCLP L +   L KLS+LSDL+
Subjt:  ---------GGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT

A0A6J1FDS0 uncharacterized protein LOC1114444668.1e-2528.96Show/hide
Query:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAFE---------------------------------------------
        + FEDEE+FDPNV GTET   GWS IASR LRTCIAYSSSVT AILLSELSQA+                                              
Subjt:  MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAFE---------------------------------------------

Query:  -------------------------------IDASL------------------------------------------------ELLDPIVVLL------
                                       ID  L                                                E  D  V+LL      
Subjt:  -------------------------------IDASL------------------------------------------------ELLDPIVVLL------

Query:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------
                              IESIGP+EI+EK NGL+MIQISL+DND F LKF+                                            
Subjt:  ----------------------IESIGPLEIYEKINGLRMIQISLVDNDDFNLKFI--------------------------------------------

Query:  ---------------------------------------------------------------SFVVDLQDKMTGISLY---------------------
                                                                       SFVVDLQDKMTGISLY                     
Subjt:  ---------------------------------------------------------------SFVVDLQDKMTGISLY---------------------

Query:  -------------------GKIG-GHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT
                           G++G GHTVYIS LTCTI KN LEALWIENHVGASFVN SCLP L +   L K+SRLSDLT
Subjt:  -------------------GKIG-GHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHL-KLSRLSDLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G17030.1 Nucleic acid-binding proteins superfamily2.3e-0832.81Show/hide
Query:  DDFNLKFISFVVDLQDKMTGISLY----------------------------------------GKIG-GHTVYISVLTCTINK-NRLEALWIENHVGAS
        D  N  F + + D++DK TGISLY                                        G++G GH VY+S L+C I K N +E LW E    A+
Subjt:  DDFNLKFISFVVDLQDKMTGISLY----------------------------------------GKIG-GHTVYISVLTCTINK-NRLEALWIENHVGAS

Query:  FVNFSCLPTLFSPGHLKL-SRLSDLTKQ
        FVN SCLP   +   + L S LS ++KQ
Subjt:  FVNFSCLPTLFSPGHLKL-SRLSDLTKQ

AT3G17030.1 Nucleic acid-binding proteins superfamily1.5e-0754.9Show/hide
Query:  EDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF
        ++E    P    TE +  GW  +ASR L+TC AYSS VTAAILLS+LSQA+
Subjt:  EDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTTGAAGACGAAGAAAACTTCGATCCTAATGTTAATGGAACGGAGACCAATGCGGCCGGTTGGAGTTTGATCGCCTCCCGGTTCCTCAGAACTTGTATCGCCTA
CTCGAGTTCTGTTACCGCTGCGATTTTGCTATCTGAGCTCTCGCAGGCTTTTGAAATTGATGCGTCCTTAGAGTTGCTTGATCCAATTGTAGTCCTGTTGATTGAATCTA
TTGGTCCACTGGAAATTTATGAGAAGATTAATGGCTTGCGGATGATACAAATCAGTCTTGTTGATAATGATGATTTCAATTTAAAGTTTATCTCTTTTGTGGTCGACCTT
CAAGACAAGATGACTGGCATTAGCTTATATGGTAAGATCGGTGGACATACAGTATATATAAGTGTCCTGACATGCACCATAAACAAGAATCGCTTGGAGGCTTTATGGAT
TGAGAATCATGTTGGAGCTTCTTTTGTCAACTTTAGCTGCTTGCCAACATTGTTTTCTCCTGGTCATCTTAAACTTTCACGACTTTCTGATCTTACGAAGCAATACTCAT
GGTACAAAGGACCACTAGAGAGCTCTAATCGCCCATCCCCAACAGGCCACCTCGCTGAAAGGATTTATGGGAGCCGTACATCAATATCCTTTGGAGATCAAGAACATAAT
AGTGAATTGAAGGAGGAAGATCGGCAGATGTGGAAATAA
mRNA sequenceShow/hide mRNA sequence
AATGGCTTAATCCGGATGTTAACTTGGAATGAACTCGGTGATTCTCTCGATGTCTTCTCGGGGCCGACATTTCAATTTGAACGATGCCGGCCGAAACTCAGTCATGGAGT
TAGATGGCGTCAAAGGCTGTAGGAAGAAGAAGATGATGATCCGCTTCATAAATTTATCGATTACGCGAGGTCTTTGATGTTATTTGAAGACGAAGAAAACTTCGATCCTA
ATGTTAATGGAACGGAGACCAATGCGGCCGGTTGGAGTTTGATCGCCTCCCGGTTCCTCAGAACTTGTATCGCCTACTCGAGTTCTGTTACCGCTGCGATTTTGCTATCT
GAGCTCTCGCAGGCTTTTGAAATTGATGCGTCCTTAGAGTTGCTTGATCCAATTGTAGTCCTGTTGATTGAATCTATTGGTCCACTGGAAATTTATGAGAAGATTAATGG
CTTGCGGATGATACAAATCAGTCTTGTTGATAATGATGATTTCAATTTAAAGTTTATCTCTTTTGTGGTCGACCTTCAAGACAAGATGACTGGCATTAGCTTATATGGTA
AGATCGGTGGACATACAGTATATATAAGTGTCCTGACATGCACCATAAACAAGAATCGCTTGGAGGCTTTATGGATTGAGAATCATGTTGGAGCTTCTTTTGTCAACTTT
AGCTGCTTGCCAACATTGTTTTCTCCTGGTCATCTTAAACTTTCACGACTTTCTGATCTTACGAAGCAATACTCATGGTACAAAGGACCACTAGAGAGCTCTAATCGCCC
ATCCCCAACAGGCCACCTCGCTGAAAGGATTTATGGGAGCCGTACATCAATATCCTTTGGAGATCAAGAACATAATAGTGAATTGAAGGAGGAAGATCGGCAGATGTGGA
AATAA
Protein sequenceShow/hide protein sequence
MLFEDEENFDPNVNGTETNAAGWSLIASRFLRTCIAYSSSVTAAILLSELSQAFEIDASLELLDPIVVLLIESIGPLEIYEKINGLRMIQISLVDNDDFNLKFISFVVDL
QDKMTGISLYGKIGGHTVYISVLTCTINKNRLEALWIENHVGASFVNFSCLPTLFSPGHLKLSRLSDLTKQYSWYKGPLESSNRPSPTGHLAERIYGSRTSISFGDQEHN
SELKEEDRQMWK