; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg19690 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19690
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionpre-mRNA-splicing factor CWC25-like isoform X2
Genome locationCarg_Chr16:1765390..1767203
RNA-Seq ExpressionCarg19690
SyntenyCarg19690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576912.1 hypothetical protein SDJN03_24486, partial [Cucurbita argyrosperma subsp. sororia]2.2e-10998.14Show/hide
Query:  TSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGND
        +SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRS FQHDKRGND
Subjt:  TSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGND

Query:  GQVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMVSE
        GQVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRD+SHRDES KLEDDAPTSARKRPAFSEKKITVGNESGEKAAMVSE
Subjt:  GQVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMVSE

Query:  IQKSSDPHQPRDGRE
        IQKSSDPHQPRDGRE
Subjt:  IQKSSDPHQPRDGRE

KAG7014939.1 hypothetical protein SDJN02_22570, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-121100Show/hide
Query:  MELWYDMNMWLTVTSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPR
        MELWYDMNMWLTVTSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPR
Subjt:  MELWYDMNMWLTVTSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPR

Query:  SRSCFQHDKRGNDGQVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDAPTSARKRPAFSEKKITV
        SRSCFQHDKRGNDGQVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDAPTSARKRPAFSEKKITV
Subjt:  SRSCFQHDKRGNDGQVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDAPTSARKRPAFSEKKITV

Query:  GNESGEKAAMVSEIQKSSDPHQPRDGRE
        GNESGEKAAMVSEIQKSSDPHQPRDGRE
Subjt:  GNESGEKAAMVSEIQKSSDPHQPRDGRE

XP_023521658.1 pre-mRNA-splicing factor CWC25-like [Cucurbita pepo subsp. pepo]1.7e-10193.95Show/hide
Query:  TSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGND
        +SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKG NRNSDRRD  TKHSMNPTEVPRSRS FQH KRGND
Subjt:  TSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGND

Query:  GQVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMVSE
        GQV    G+SFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQR+EMPQAVRD+SHRDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMVSE
Subjt:  GQVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMVSE

Query:  IQKSSDPHQPRDGRE
        IQKSSDPHQPRDGRE
Subjt:  IQKSSDPHQPRDGRE

XP_023552844.1 uncharacterized protein LOC111810369 [Cucurbita pepo subsp. pepo]1.2e-8391.26Show/hide
Query:  MELWYDMNMWLTVTSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPR
        MELW+DMNMWL VTSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKG NRNSDRRD  TKHSMNPTEVPR
Subjt:  MELWYDMNMWLTVTSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPR

Query:  SRSCFQHDKRGNDGQVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDA
        SRS FQH KRGNDGQV    G+SFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQR+EMPQAVRD+SHRDESSKLED +
Subjt:  SRSCFQHDKRGNDGQVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDA

XP_038903819.1 uncharacterized protein LOC120090316 [Benincasa hispida]8.3e-7776.64Show/hide
Query:  SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGNDG
        SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKH L+H GQDM+PHE S AL+SK E  V KG  RNSD RDGGTKHS+NPTEVPRSRS FQHD+RGN G
Subjt:  SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGNDG

Query:  QVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMVSEI
        QV    GRSFG++AT ER WWKDS++ +KDNDRASGK TAYNSQQRDE PQA R++ H D SSKLE DA   ARKRPAF EKKITVGNE+GEKAAMV E 
Subjt:  QVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMVSEI

Query:  QKSSDPHQPRDGRE
        +KSSD HQP++GRE
Subjt:  QKSSDPHQPRDGRE

TrEMBL top hitse value%identityAlignment
A0A0A0KV12 Uncharacterized protein4.6e-7373.83Show/hide
Query:  SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGNDG
        SPKRS+RDRKTLEEKLSRNSSSHVEDNK+RDQKH L+  GQDMIPHE S AL+SKPE G   G NRNSD RDGGTKHS+NPTEVPRSRS FQHD+R N G
Subjt:  SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGNDG

Query:  QVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMVSEI
        QV    GRSFGRSAT ERGWWKDS++ +KD+DRASGK   Y SQQRDE PQA R++ H D SSKLE DA T ARKRPAF EKKITV NE GEK AMV E 
Subjt:  QVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMVSEI

Query:  QKSSDPHQPRDGRE
        +KS+D HQ ++GRE
Subjt:  QKSSDPHQPRDGRE

A0A6J1E9N7 uncharacterized protein LOC1114306496.9e-7790.34Show/hide
Query:  SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGNDG
        SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSS LDSKPEYGVSKG NRNSDRRD GTKHS+NPTEVPRSRS  QH KRGNDG
Subjt:  SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGNDG

Query:  QVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDAPTSARKR
        QV    GRSFGRSATRERGWWKDSREKEKDNDRASGK TAYNSQQRDEMPQAVRD+SHRDESSK E DAPTSA K+
Subjt:  QVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDAPTSARKR

A0A6J1FPJ0 pre-mRNA-splicing factor CWC25-like isoform X14.6e-7372.35Show/hide
Query:  SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGNDG
        SPKRSRRDRK LEEKLSRNSSSHVEDNKDRDQKH L+HEGQD  PHE S ALDS PE GVSKG NRNSD R+GGTK S+NPTEVPRSRS FQHDKRG+ G
Subjt:  SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGNDG

Query:  QVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSH---RDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMV
        QV    GRSFGRS++  RGWWKDS+E++K++DRASGK   YNSQ+RDE+PQ V++++H   RD SSKLE D+   ARKRPAF EKKIT  NE+ EKA M 
Subjt:  QVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSH---RDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMV

Query:  SEIQKSSDPHQPRDGRE
        SE +K SDPHQP+DGRE
Subjt:  SEIQKSSDPHQPRDGRE

A0A6J1FQX4 pre-mRNA-splicing factor CWC25-like isoform X24.6e-7372.35Show/hide
Query:  SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGNDG
        SPKRSRRDRK LEEKLSRNSSSHVEDNKDRDQKH L+HEGQD  PHE S ALDS PE GVSKG NRNSD R+GGTK S+NPTEVPRSRS FQHDKRG+ G
Subjt:  SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGNDG

Query:  QVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSH---RDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMV
        QV    GRSFGRS++  RGWWKDS+E++K++DRASGK   YNSQ+RDE+PQ V++++H   RD SSKLE D+   ARKRPAF EKKIT  NE+ EKA M 
Subjt:  QVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSH---RDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMV

Query:  SEIQKSSDPHQPRDGRE
        SE +K SDPHQP+DGRE
Subjt:  SEIQKSSDPHQPRDGRE

A0A6J1JAV5 pre-mRNA-splicing factor CWC25 isoform X23.9e-7271.43Show/hide
Query:  SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGNDG
        SPKRSRRDRK LEEKLSRNSSSHVEDNKDRDQKH L+HEGQD+ PHE S ALDS PE GVSKG NRNSD R+GGTK ++NPTEVPRSRS FQHDKRG+ G
Subjt:  SPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKRGNDG

Query:  QVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSH---RDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMV
        QV    GRSFGRS++  RGWWKDS+E++K++DRASGK   YNSQ+RDE+PQ V++++H   RD SSKLE D+   ARKRPAF EKKIT  NE+ EKA M 
Subjt:  QVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSH---RDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMV

Query:  SEIQKSSDPHQPRDGRE
        SE +K SDPH P+DGRE
Subjt:  SEIQKSSDPHQPRDGRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTCTGGTATGACATGAATATGTGGCTTACTGTTACTAGTCCCAAGAGGTCAAGGAGGGACAGGAAAACATTAGAGGAGAAGTTATCTAGAAACTCTAGTTCTCA
TGTTGAAGATAATAAAGATCGGGATCAGAAACATGGGCTTCAACATGAGGGGCAAGATATGATACCCCATGAGTGTTCATCAGCACTTGATTCTAAGCCAGAATATGGGG
TTAGCAAAGGAGAAAACAGGAACAGTGATAGGAGGGATGGAGGGACTAAACATTCAATGAATCCCACTGAAGTACCACGATCAAGATCTTGTTTTCAGCATGACAAACGT
GGTAATGATGGGCAAGTTGGTCGAAGCTTTGGTCGAAGCTTTGGTCGGAGTGCAACTAGGGAGCGTGGTTGGTGGAAGGACTCAAGGGAGAAGGAGAAGGATAACGATAG
GGCATCTGGGAAGGGAACGGCTTATAATTCACAGCAAAGAGATGAGATGCCACAAGCCGTGAGAGACAATAGCCACCGTGATGAGTCTTCGAAACTGGAGGATGATGCAC
CCACTTCTGCTCGGAAAAGGCCTGCATTTAGCGAGAAGAAGATTACAGTAGGCAATGAAAGTGGTGAGAAAGCAGCTATGGTATCAGAGATTCAGAAATCGAGTGATCCA
CACCAGCCTCGGGATGGAAGGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTCTGGTATGACATGAATATGTGGCTTACTGTTACTAGTCCCAAGAGGTCAAGGAGGGACAGGAAAACATTAGAGGAGAAGTTATCTAGAAACTCTAGTTCTCA
TGTTGAAGATAATAAAGATCGGGATCAGAAACATGGGCTTCAACATGAGGGGCAAGATATGATACCCCATGAGTGTTCATCAGCACTTGATTCTAAGCCAGAATATGGGG
TTAGCAAAGGAGAAAACAGGAACAGTGATAGGAGGGATGGAGGGACTAAACATTCAATGAATCCCACTGAAGTACCACGATCAAGATCTTGTTTTCAGCATGACAAACGT
GGTAATGATGGGCAAGTTGGTCGAAGCTTTGGTCGAAGCTTTGGTCGGAGTGCAACTAGGGAGCGTGGTTGGTGGAAGGACTCAAGGGAGAAGGAGAAGGATAACGATAG
GGCATCTGGGAAGGGAACGGCTTATAATTCACAGCAAAGAGATGAGATGCCACAAGCCGTGAGAGACAATAGCCACCGTGATGAGTCTTCGAAACTGGAGGATGATGCAC
CCACTTCTGCTCGGAAAAGGCCTGCATTTAGCGAGAAGAAGATTACAGTAGGCAATGAAAGTGGTGAGAAAGCAGCTATGGTATCAGAGATTCAGAAATCGAGTGATCCA
CACCAGCCTCGGGATGGAAGGGAATGA
Protein sequenceShow/hide protein sequence
MELWYDMNMWLTVTSPKRSRRDRKTLEEKLSRNSSSHVEDNKDRDQKHGLQHEGQDMIPHECSSALDSKPEYGVSKGENRNSDRRDGGTKHSMNPTEVPRSRSCFQHDKR
GNDGQVGRSFGRSFGRSATRERGWWKDSREKEKDNDRASGKGTAYNSQQRDEMPQAVRDNSHRDESSKLEDDAPTSARKRPAFSEKKITVGNESGEKAAMVSEIQKSSDP
HQPRDGRE