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Carg19694 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19694
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationCarg_Chr16:1729795..1731609
RNA-Seq ExpressionCarg19694
SyntenyCarg19694
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576909.1 Cysteine-rich and transmembrane domain-containing protein WIH2, partial [Cucurbita argyrosperma subsp. sororia]2.0e-39100Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
        MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG

KAG7014935.1 Cysteine-rich and transmembrane domain-containing protein WIH2 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-77100Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGWRLKSDLNHSDDMV
        MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGWRLKSDLNHSDDMV
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGWRLKSDLNHSDDMV

Query:  SETEFRTSQLHRLFGCAVLLLPARRLLLKRPHVQCVVGGLQIQELSLSLSQ
        SETEFRTSQLHRLFGCAVLLLPARRLLLKRPHVQCVVGGLQIQELSLSLSQ
Subjt:  SETEFRTSQLHRLFGCAVLLLPARRLLLKRPHVQCVVGGLQIQELSLSLSQ

XP_022922446.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]2.0e-39100Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
        MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG

XP_022985146.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima]1.7e-3898.84Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
        MSYYNQGQAPVGVPPP GYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG

XP_023551906.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo]2.3e-3897.67Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
        MSYYNQGQAP+GVPPP GYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG

TrEMBL top hitse value%identityAlignment
A0A2C9V6I2 Rhodopsin3.5e-2986.52Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY---PPPYAPQYGQPPPPQQQSSSSGCLQG
        MSYYNQ Q PVGVPPP GYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPP G YPPQGY   PP YAPQYGQPPPP QQ+SSSGCL+G
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY---PPPYAPQYGQPPPPQQQSSSSGCLQG

A0A314YZL0 Cysteine-rich and transmembrane domain-containing protein A2.3e-2866.41Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGWRLKSDLNHSDDMV
        MSYYNQ Q PVGVPPP GYPPEGYPKDAYPPPGYPPQ     GYP QGYPPP  Y  Q YPPPYAPQY Q PPPQQQSSSSGCL+GW  K         +
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGWRLKSDLNHSDDMV

Query:  SETEFRTSQLHRL--FGCAVLLLPARRLLLK
         +  F   QLH +  FGC+VLLL A  LLLK
Subjt:  SETEFRTSQLHRL--FGCAVLLLPARRLLLK

A0A498JNY6 Uncharacterized protein4.6e-2964.84Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGWRLKSDLNHSDDMV
        MSYYNQ Q PVGVPPP GYPPEGYPKDAYPPPGYPPQGYP    PPQGY       PQGYPPPYAPQY Q PPPQQQ++SSG ++GW +   L       
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGWRLKSDLNHSDDMV

Query:  SETEFRTSQLHRLFGCAVLLLPARRLLL
           EF T     LFGC+VLLL AR LLL
Subjt:  SETEFRTSQLHRLFGCAVLLLPARRLLL

A0A6J1E456 cysteine-rich and transmembrane domain-containing protein WIH2-like9.9e-40100Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
        MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG

A0A6J1J7A9 cysteine-rich and transmembrane domain-containing protein WIH2-like8.4e-3998.84Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
        MSYYNQGQAPVGVPPP GYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG

SwissProt top hitse value%identityAlignment
P09241 Rhodopsin8.7e-0974.55Show/hide
Query:  PPPHGYPPEGY-PKDAYPPP-GYPPQGYPPPGYPPQGYPPPGAYP----PQGYPP
        PPP GYPP+GY P+ AYPPP GYPPQGYPP GYPPQGYPP GA P    PQG PP
Subjt:  PPPHGYPPEGY-PKDAYPPP-GYPPQGYPPPGYPPQGYPPPGAYP----PQGYPP

Q17094 Rhodopsin (Fragment)1.6e-0769.64Show/hide
Query:  PPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGY-PPPGAYPPQGYPPPYAPQYG
        PP GYPP+GYP    PP GYPPQGYPP GYPPQGY PPP   PPQG PP  AP  G
Subjt:  PPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGY-PPPGAYPPQGYPPPYAPQYG

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B7.6e-1365.12Show/hide
Query:  NQGQAPVGVPPPHGYPPEGYPKDAYPPPG--YPPQGYPPP-GYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSS-SSGCLQG
        +Q    VGVPP H YP EG PKDAYPPPG  YP QGYPPP GYP QGYPP G YPPQGYP    PQ G PP  QQQ   S G L+G
Subjt:  NQGQAPVGVPPPHGYPPEGYPKDAYPPPG--YPPQGYPPP-GYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSS-SSGCLQG

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH22.8e-2376.74Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
        MS YN  Q PVGVPPP GYPPEGYPKDAYPP GYPPQGYP  GYPPQGYP  G YP QGYPPPYAPQY  PP  QQQ SS G L+G
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH16.0e-1057.83Show/hide
Query:  YNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
        Y+Q Q PVG PPP GYP    PKD YPP GYPP GYPPPGY  QG      YP QGYPP   PQY Q P   QQ  ++G L+G
Subjt:  YNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG

Arabidopsis top hitse value%identityAlignment
AT1G31750.1 proline-rich family protein8.9e-0968.33Show/hide
Query:  HGYPPEGY---PKDAYPPP-GYPPQGYPPP--GYPPQGY-PPPGAYPPQGYPPPYAPQYG
        HGYPP  Y   P+ AYPPP GYPPQGYPPP  GYPP  Y PPPGAYPP GYP P  P+ G
Subjt:  HGYPPEGY---PKDAYPPP-GYPPQGYPPP--GYPPQGY-PPPGAYPPQGYPPPYAPQYG

AT2G41420.1 proline-rich family protein2.0e-2476.74Show/hide
Query:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
        MS YN  Q PVGVPPP GYPPEGYPKDAYPP GYPPQGYP  GYPPQGYP  G YP QGYPPPYAPQY  PP  QQQ SS G L+G
Subjt:  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG

AT3G49845.1 unknown protein7.3e-1157.65Show/hide
Query:  YNQGQAPVGVPPPHGYPP-EGYPKDAYPPP-GYPPQGYPPPGYPPQGYPPP-----GAYPPQGYPPPYAPQ-------YGQPPPP
        Y   Q PV  PPP GYPP EGYP   YPPP GYPP  YP  GYPP GYPPP       YP QGYPPP  PQ       Y  PPPP
Subjt:  YNQGQAPVGVPPPHGYPP-EGYPKDAYPPP-GYPPQGYPPPGYPPQGYPPP-----GAYPPQGYPPPYAPQ-------YGQPPPP

AT5G45350.1 proline-rich family protein4.4e-0858.33Show/hide
Query:  GQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPP-PGAYPPQ----GYPPPYAPQYGQPPP
        G  P G PPP  YPP GYP+  YPP   PP  YPP GYPP  YPP PG YPP     GYPP  AP YG  PP
Subjt:  GQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPP-PGAYPPQ----GYPPPYAPQYGQPPP

AT5G67600.1 unknown protein4.3e-1157.83Show/hide
Query:  YNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG
        Y+Q Q PVG PPP GYP    PKD YPP GYPP GYPPPGY  QG      YP QGYPP   PQY Q P   QQ  ++G L+G
Subjt:  YNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCATGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCA
GGGATATCCACCCCCAGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAACCTCCTCCTC
CTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGGCGGTTGAAATCGGATCTGAATCATTCCGATGATATGGTATCGGAAACTGAATTCAGAACGAGCCAATTG
CATCGTCTGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGAAGAGACCCCATGTGCAGTGTGTGGTGGGCGGGCTTCAAATTCAAGAACTATCTCT
CTCTCTCTCTCAGTAA
mRNA sequenceShow/hide mRNA sequence
CAAACAAACATAACCTTCTCTGTTTGTCGGTAATCTCAAACTCTGTCTTCGGATTATATATACAAATCCTTCAGATCCCAATCTTCTTCTCTGTACTTCGCAGACCTTCG
CTGTCGTCTCCATTAACTCCTCCATCTATCTTCAGTTTTTCCTTCATTTTTTTGTTTTTGTTTTTGTGAATTCCGGCCGGATTCGTCGACGTTGTTCGGCGGTCGGGATT
GATTGTGTTGAGAGGGAGATATCTTGTGATTTGAAGAGGAAGTAGAAGAGATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCATGGTTATCCG
CCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGATATCCACCCCCAGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCTTATCCGCC
GCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAACCTCCTCCTCCTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGGCGGTTGAAATCGGATCTGA
ATCATTCCGATGATATGGTATCGGAAACTGAATTCAGAACGAGCCAATTGCATCGTCTGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGAAGAGA
CCCCATGTGCAGTGTGTGGTGGGCGGGCTTCAAATTCAAGAACTATCTCTCTCTCTCTCTCAGTAAAGCTTTTCCCTAAGAGAAAAAAGATTGAAACTGGGCGTTCAATT
TGTGAAGTTTTTAATTTGTTGCGTTTATTGATTATAATAGTCTAGTGCTTGTTCCTCCCTCGTTCCCTCCATTTTTCTTATATAAATAACACCCCCTTATCTCTCTCTAG
TTTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGWRLKSDLNHSDDMVSETEFRTSQL
HRLFGCAVLLLPARRLLLKRPHVQCVVGGLQIQELSLSLSQ