; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg19727 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19727
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell;
Genome locationCarg_Chr16:1566272..1570538
RNA-Seq ExpressionCarg19727
SyntenyCarg19727
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR013714 - Golgi apparatus membrane protein TVP15


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454462.1 PREDICTED: uncharacterized protein LOC103494861 [Cucumis melo]8.0e-8485.93Show/hide
Query:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW
        MER GEGA A  +++++++SSSQ +RP R VDPLLVTCRFFSV+TALTAILCIVSNVI+AIRSFKN+SDIFDGIFRCYAVVI FFVVLAETEWEFI KNW
Subjt:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW

Query:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV
        KVLEYWAGRGMLQIFVAVMTRAFP YSVEQRE ILLQ+AASYLLLACGAVYVVSGILCIGFLKRARE+KET+KD+VVKDLQELERQKQELEQLLIS++V
Subjt:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV

XP_022922529.1 uncharacterized protein LOC111430498 [Cucurbita moschata]2.6e-98100Show/hide
Query:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW
        MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW
Subjt:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW

Query:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV
        KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV
Subjt:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV

XP_022984240.1 uncharacterized protein LOC111482612 [Cucurbita maxima]1.3e-9799.5Show/hide
Query:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW
        MERGGEGAAAGTTAAATAASSSQT RPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW
Subjt:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW

Query:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV
        KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV
Subjt:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV

XP_023552582.1 uncharacterized protein LOC111810200 isoform X2 [Cucurbita pepo subsp. pepo]9.7e-9898.99Show/hide
Query:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW
        MERGGEGAA GTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNV+AAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW
Subjt:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW

Query:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV
        KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV
Subjt:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV

XP_038905258.1 uncharacterized protein LOC120091338 isoform X1 [Benincasa hispida]1.1e-8589.45Show/hide
Query:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW
        MER GEGA      AA A+SSSQT RP RRVDPLLVTCRFFSV+TALTAILCIVSNVI+AIRSFKNKSD+FDGIFRCYAVVIA FVVLAETEWEFILKNW
Subjt:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW

Query:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV
        KVLEYWAGRGMLQIFVAVMTRAFP YSVEQRE ILLQ+AASYLLLACGAVYVVSGILCIGFLKRAREEKET+KDRVVKDLQELERQKQELEQLLIS++V
Subjt:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV

TrEMBL top hitse value%identityAlignment
A0A0A0KYH6 Uncharacterized protein3.9e-8486Show/hide
Query:  MERGGEGA-AAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKN
        MER GEGA A    A+++++SSSQ +RP R VDPLLVTCRFFSV+TALTAILCIVSNVI+AIRSFKN+SDIFDGIFRCYAVVIAFF VLAETEWEFI KN
Subjt:  MERGGEGA-AAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKN

Query:  WKVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV
        WKVLEYWAGRGMLQIFVAVMTRAFP YSVEQRE ILLQ+AASYLLLACGAVYVVSGILCIGFLKRARE+KET+KD+VVKDLQELERQKQELEQLLIS++V
Subjt:  WKVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV

A0A1S3BY74 uncharacterized protein LOC1034948613.9e-8485.93Show/hide
Query:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW
        MER GEGA A  +++++++SSSQ +RP R VDPLLVTCRFFSV+TALTAILCIVSNVI+AIRSFKN+SDIFDGIFRCYAVVI FFVVLAETEWEFI KNW
Subjt:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW

Query:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV
        KVLEYWAGRGMLQIFVAVMTRAFP YSVEQRE ILLQ+AASYLLLACGAVYVVSGILCIGFLKRARE+KET+KD+VVKDLQELERQKQELEQLLIS++V
Subjt:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV

A0A6J1D697 uncharacterized protein LOC1110177041.1e-7577.94Show/hide
Query:  MERGGEGAAAGTT----AAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFI
        M + GE   AG T    A+++++SSS T+R GRRVDPLLVTCRFFSV+TALTAILCIV NVI+A+RSFK+K+DIFDGIFRCYAV+IA FVVLAETEWEFI
Subjt:  MERGGEGAAAGTT----AAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFI

Query:  LKNWKVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELE-QLLI
        +K WKVLEYWAGRGMLQIFVAVMTRAFPAYS +QRE I+LQ+ ASYLLL CGAVYV SGILC+GFLKRAREEKET+K+R VKDLQELERQKQELE +LLI
Subjt:  LKNWKVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELE-QLLI

Query:  SDSV
        ++SV
Subjt:  SDSV

A0A6J1E3M8 uncharacterized protein LOC1114304981.2e-98100Show/hide
Query:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW
        MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW
Subjt:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW

Query:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV
        KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV
Subjt:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV

A0A6J1J849 uncharacterized protein LOC1114826126.2e-9899.5Show/hide
Query:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW
        MERGGEGAAAGTTAAATAASSSQT RPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW
Subjt:  MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNW

Query:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV
        KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV
Subjt:  KVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33625.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 59 Blast hits to 59 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).8.3e-6367.22Show/hide
Query:  ATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIF
        A  +S S   + G R DP LV CR FS+VT+L AILC+V NV+AA+RSF++  D+FDGIFRCYAVVIA FVVL ETEW FILK  KVLEYWAGRGMLQIF
Subjt:  ATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIF

Query:  VAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLI
        VAVMTRAFP Y  ++++ +LLQ  ASYLLLACG +YV+SG+LCIGFLKRAR++KE S+++ VKDL+E+ R+K+ELEQLL+
Subjt:  VAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLI

AT4G33625.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).2.7e-6167.22Show/hide
Query:  ATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIF
        A  +S S   + G R DP LV CR FS+VT+L AILC+V NV+AA+RSF++  D+FDGIFRCYAVVIA FVVL ETEW FILK  KVLEYWAGRGMLQIF
Subjt:  ATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIF

Query:  VAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLI
        VAVMTRAFP Y  ++++ +LLQ  ASYLLLACG +YV+SG+LCIGFLKRAR++KE S+++ VKDL E+ R+K+ELEQLL+
Subjt:  VAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGGCGGTGAGGGAGCGGCGGCGGGGACGACGGCAGCGGCGACGGCGGCATCGTCTTCTCAGACCAGCAGACCTGGTAGGAGGGTGGATCCTTTGCTTGTAAC
TTGCAGGTTTTTCAGTGTTGTAACAGCTCTCACTGCCATTCTCTGCATTGTTTCCAACGTTATCGCTGCGATTCGGTCATTTAAGAACAAATCCGATATATTCGATGGTA
TATTTCGGTGTTATGCCGTTGTGATTGCGTTCTTCGTGGTTCTTGCTGAGACGGAATGGGAGTTTATTCTCAAGAACTGGAAGGTATTGGAATATTGGGCTGGCCGGGGC
ATGTTGCAAATCTTTGTTGCAGTGATGACAAGAGCTTTCCCGGCGTATTCTGTAGAGCAGAGAGAGTTTATTCTTCTTCAAGAGGCTGCAAGTTATCTCCTCCTTGCCTG
CGGTGCAGTCTATGTTGTATCGGGAATTCTGTGCATTGGGTTTCTCAAACGTGCTCGTGAAGAGAAGGAGACTTCAAAGGACAGGGTCGTCAAAGATCTTCAGGAGTTAG
AAAGACAAAAGCAAGAACTTGAACAGTTGCTCATTTCAGACTCTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATTCTTAGGAAAAGTTTGTCGATTCAATCATCTTGCCCAATCAGTAAGCTGAACCGTAAGAGGGAAATTCAGGGGAACTCAGAAAATGGAGAGAGGCGGTGAGGGAGCGG
CGGCGGGGACGACGGCAGCGGCGACGGCGGCATCGTCTTCTCAGACCAGCAGACCTGGTAGGAGGGTGGATCCTTTGCTTGTAACTTGCAGGTTTTTCAGTGTTGTAACA
GCTCTCACTGCCATTCTCTGCATTGTTTCCAACGTTATCGCTGCGATTCGGTCATTTAAGAACAAATCCGATATATTCGATGGTATATTTCGGTGTTATGCCGTTGTGAT
TGCGTTCTTCGTGGTTCTTGCTGAGACGGAATGGGAGTTTATTCTCAAGAACTGGAAGGTATTGGAATATTGGGCTGGCCGGGGCATGTTGCAAATCTTTGTTGCAGTGA
TGACAAGAGCTTTCCCGGCGTATTCTGTAGAGCAGAGAGAGTTTATTCTTCTTCAAGAGGCTGCAAGTTATCTCCTCCTTGCCTGCGGTGCAGTCTATGTTGTATCGGGA
ATTCTGTGCATTGGGTTTCTCAAACGTGCTCGTGAAGAGAAGGAGACTTCAAAGGACAGGGTCGTCAAAGATCTTCAGGAGTTAGAAAGACAAAAGCAAGAACTTGAACA
GTTGCTCATTTCAGACTCTGTGTGAGACAATTTAAAGACATCCCCATGCATCAGAATATAACTGCACCCACCTGATTCTCGTTTCGCCTCCGGACTGTATGAGCATTTGT
GTTGCTTCATTTTTAATTCTACTATGATTGCCCCCTCATAGAGATCTAATCATGTAAATTGTGTCTAACTTGACAATTTGTCTCTGCAGTTATCATGTATTCTGACTGTC
TTGACAATTGTCTCGCTGTATTATGAAAAGAATCTGTTTATTGAGACCAAAAAAATGGTGTTTTTCTCTCTAAATTGATGCTGTGACTTCAGTGATTTAGAACCACAGTC
CCTGTGACATCTTGATGAACGGTCTCAATCCAACAAGATCACATATGTGAGATCTCACATTGGTTGGAGAGGGTAACGAAACATT
Protein sequenceShow/hide protein sequence
MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRG
MLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV