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Carg19743 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19743
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr15:10216135..10216485
RNA-Seq ExpressionCarg19743
SyntenyCarg19743
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579722.1 hypothetical protein SDJN03_24170, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5599.14Show/hide
Query:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQ
        MEGLIPMFY+AMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQ
Subjt:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQ

Query:  LVRFRSQRILSCLTGQ
        LVRFRSQRILSCLTGQ
Subjt:  LVRFRSQRILSCLTGQ

KAG7017165.1 hypothetical protein SDJN02_22277, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-5094.83Show/hide
Query:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQ
        MEGLIPMFYRAMKKTRIRSQYSVLSPE AAAA SPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTS    AAAAKSSHGPQ
Subjt:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQ

Query:  LVRFRSQRILSCLTGQ
        LVRFRSQRILSCLTGQ
Subjt:  LVRFRSQRILSCLTGQ

KAG7017171.1 hypothetical protein SDJN02_22283, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-56100Show/hide
Query:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQ
        MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQ
Subjt:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQ

Query:  LVRFRSQRILSCLTGQ
        LVRFRSQRILSCLTGQ
Subjt:  LVRFRSQRILSCLTGQ

XP_022929072.1 uncharacterized protein LOC111435769 [Cucurbita moschata]1.2e-5095.69Show/hide
Query:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQ
        MEGLIPMFYRAMKKTRIRSQYSVLSPE AAAA SPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTS   AAAAAKSSHGPQ
Subjt:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQ

Query:  LVRFRSQRILSCLTGQ
        LVRFRSQRILSCLTGQ
Subjt:  LVRFRSQRILSCLTGQ

XP_023551320.1 uncharacterized protein LOC111809172 [Cucurbita pepo subsp. pepo]2.8e-5298.28Show/hide
Query:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQ
        MEGLIPMFYRAMKKTRIRSQYSVLSPE AAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTS AAAAAAAKSSHGPQ
Subjt:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQ

Query:  LVRFRSQRILSCLTGQ
        LVRFRSQRILSCLTGQ
Subjt:  LVRFRSQRILSCLTGQ

TrEMBL top hitse value%identityAlignment
A0A0A0LL24 Uncharacterized protein3.4e-2462.6Show/hide
Query:  MEGLIPMFYRAMKKTRIRSQYSVLS----PEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSS
        M+GLIP+FYRAMKK R R QY+VLS     EA   AAS SFNIADFYVDPPS       KSE     RA+RRYNS+ GST +EWRR    +  AA   SS
Subjt:  MEGLIPMFYRAMKKTRIRSQYSVLS----PEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSS

Query:  HGP----QLVRFRSQRILSCLTG
        HGP    QLVRFRSQRILSCLTG
Subjt:  HGP----QLVRFRSQRILSCLTG

A0A1S3B4K9 uncharacterized protein LOC1034857497.6e-2461.34Show/hide
Query:  MEGLIPMFYRAMKKTRIRSQYSVLS----PEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSS
        M+GLIPMFYRAMKK R R QY+VLS     E+   AAS SFNIADFYVDPPS       KSE     R +RRYNS+GGSTP+EWRR+  AA  + +    
Subjt:  MEGLIPMFYRAMKKTRIRSQYSVLS----PEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSS

Query:  HGPQLVRFRSQRILSCLTG
           QLVRFRSQRILSCLTG
Subjt:  HGPQLVRFRSQRILSCLTG

A0A5A7ST27 Uncharacterized protein7.6e-2461.34Show/hide
Query:  MEGLIPMFYRAMKKTRIRSQYSVLS----PEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSS
        M+GLIPMFYRAMKK R R QY+VLS     E+   AAS SFNIADFYVDPPS       KSE     R +RRYNS+GGSTP+EWRR+  AA  + +    
Subjt:  MEGLIPMFYRAMKKTRIRSQYSVLS----PEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSS

Query:  HGPQLVRFRSQRILSCLTG
           QLVRFRSQRILSCLTG
Subjt:  HGPQLVRFRSQRILSCLTG

A0A6J1ELR2 uncharacterized protein LOC1114357695.6e-5195.69Show/hide
Query:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQ
        MEGLIPMFYRAMKKTRIRSQYSVLSPE AAAA SPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTS   AAAAAKSSHGPQ
Subjt:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQ

Query:  LVRFRSQRILSCLTGQ
        LVRFRSQRILSCLTGQ
Subjt:  LVRFRSQRILSCLTGQ

A0A6J1I2E5 uncharacterized protein LOC1114689902.4e-4993.16Show/hide
Query:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAA-SPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGP
        MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAA SPSFNIADFYVDPPSTHVFPTSKSEDPGA RA RRYNSFGGSTPEEWRRTTS    AAA KSSHGP
Subjt:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAA-SPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGP

Query:  QLVRFRSQRILSCLTGQ
        QLVRFRSQRILSCLTGQ
Subjt:  QLVRFRSQRILSCLTGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G59880.1 unknown protein6.0e-0530.47Show/hide
Query:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFY----------VDPPSTHVFPTSKSEDPGATRAHRRYN--SFGGSTPEEWRRTTSAAA
        M+GLIPM ++AM+K R R +Y  LS  ++A     S++ +DF+          V  PS+       +      R HR ++   F   +  E +R+     
Subjt:  MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFY----------VDPPSTHVFPTSKSEDPGATRAHRRYN--SFGGSTPEEWRRTTSAAA

Query:  AAAAAKSSHGPQLVRFRSQRILSCLTGQ
            + S  G QLVR RS R+ SC++G+
Subjt:  AAAAAKSSHGPQLVRFRSQRILSCLTGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTTTGATTCCGATGTTCTACAGAGCGATGAAGAAAACCAGAATCAGAAGCCAATATTCAGTACTTTCCCCTGAAGCAGCAGCAGCAGCGGCTTCTCCATCTTT
CAACATTGCTGATTTCTACGTGGATCCCCCTTCAACCCACGTCTTCCCCACTTCCAAATCTGAGGACCCTGGCGCCACCAGGGCTCACCGGAGATACAACTCATTCGGCG
GATCTACGCCGGAGGAGTGGAGGAGAACTACTTCCGCCGCCGCCGCCGCCGCCGCCGCCAAGTCCAGTCATGGGCCACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTG
TCGTGCTTGACTGGGCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTTTGATTCCGATGTTCTACAGAGCGATGAAGAAAACCAGAATCAGAAGCCAATATTCAGTACTTTCCCCTGAAGCAGCAGCAGCAGCGGCTTCTCCATCTTT
CAACATTGCTGATTTCTACGTGGATCCCCCTTCAACCCACGTCTTCCCCACTTCCAAATCTGAGGACCCTGGCGCCACCAGGGCTCACCGGAGATACAACTCATTCGGCG
GATCTACGCCGGAGGAGTGGAGGAGAACTACTTCCGCCGCCGCCGCCGCCGCCGCCGCCAAGTCCAGTCATGGGCCACAGCTTGTTAGGTTCAGAAGCCAGAGGATTCTG
TCGTGCTTGACTGGGCAGTGA
Protein sequenceShow/hide protein sequence
MEGLIPMFYRAMKKTRIRSQYSVLSPEAAAAAASPSFNIADFYVDPPSTHVFPTSKSEDPGATRAHRRYNSFGGSTPEEWRRTTSAAAAAAAAKSSHGPQLVRFRSQRIL
SCLTGQ