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Carg19768 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg19768
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontransport and Golgi organization protein 2 homolog
Genome locationCarg_Chr02:1082234..1083130
RNA-Seq ExpressionCarg19768
SyntenyCarg19768
Gene Ontology termsNA
InterPro domainsIPR008551 - Transport and Golgi organisation protein 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604975.1 Transport and Golgi organization protein 2-like protein, partial [Cucurbita argyrosperma subsp. sororia]6.1e-4798.9Show/hide
Query:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
        MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLK K
Subjt:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
KAG7035008.1 Transport and Golgi organization protein 2-like protein [Cucurbita argyrosperma subsp. argyrosperma]1.2e-47100Show/hide
Query:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
        MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
Subjt:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
XP_022947387.1 transport and Golgi organization protein 2 homolog [Cucurbita moschata]6.1e-4798.9Show/hide
Query:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
        MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLK K
Subjt:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
XP_022971076.1 transport and Golgi organization protein 2 homolog [Cucurbita maxima]6.1e-4798.9Show/hide
Query:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
        MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLK K
Subjt:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
XP_023532494.1 transport and Golgi organization protein 2 homolog [Cucurbita pepo subsp. pepo]1.4e-4697.8Show/hide
Query:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
        MCIAAFLWQAHP+YPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLK K
Subjt:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
TrEMBL top hitse value%identityAlignment
A0A2I4FCF1 transport and Golgi organization 2 homolog1.9e-3881.32Show/hide
Query:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
        MCIAAFLWQAHPLYP  +LLNRDEYH+RPT+PLEWWE  EILGGRD +AGGTWLACSRNGRVAFLTN RE++ LP+AKSRG+LPVRFL+ K
Subjt:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
A0A6J1CII2 transport and Golgi organization 2 homolog1.5e-4391.21Show/hide
Query:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
        MCIAAFLWQAHPLYPFFLLLNRDEY +RPTKPLEWWEC +ILGGRDGLAGGTWLACSRNGRVAF+TNFREV+ LPQAKSRGELPVRFLK K
Subjt:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
A0A6J1G6B2 transport and Golgi organization protein 2 homolog3.0e-4798.9Show/hide
Query:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
        MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLK K
Subjt:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
A0A6J1I2B1 transport and Golgi organization protein 2 homolog3.0e-4798.9Show/hide
Query:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
        MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLK K
Subjt:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
A0A6P4AEX4 transport and Golgi organization protein 2 homolog7.3e-3880.22Show/hide
Query:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
        MCIA FLW+AHP+YPF LLLNRDEYHSRPT+PL WW+  EILGGRDGLAGGTWLACSR+GR+AFLTN REV+L+PQAK+RG+LPV FLK K
Subjt:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK
SwissProt top hitse value%identityAlignment
P54797 Transport and Golgi organization 2 homolog2.3e-1242.71Show/hide
Query:  MCIAAFLWQAHPL----YPFFLLLNRDEYHSRPTKPLEWWECN-EILGGRD---GLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFL
        MCI  F +   P+    Y   L  NRDE+++RP+K  ++W  N EIL G D   G AGGTWL  S  G++  LTN+ +    P A+ RGEL   FL
Subjt:  MCIAAFLWQAHPL----YPFFLLLNRDEYHSRPTKPLEWWECN-EILGGRD---GLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFL
Q29RZ5 Transport and Golgi organization protein 2 homolog6.6e-1240.62Show/hide
Query:  MCIAAFLWQAHPL----YPFFLLLNRDEYHSRPTKPLEWW-ECNEILGGRD---GLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFL
        MCI  F +   P+    Y   L  NRDE++ RP +  ++W   NE+L G D   G  GGTWL  S  G++A LTN+ +  L   A+ RGEL  +FL
Subjt:  MCIAAFLWQAHPL----YPFFLLLNRDEYHSRPTKPLEWW-ECNEILGGRD---GLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFL
Q6ICL3 Transport and Golgi organization protein 2 homolog3.5e-1344.79Show/hide
Query:  MCIAAFLWQAHPL----YPFFLLLNRDEYHSRPTKPLEWW-ECNEILGGRD---GLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFL
        MCI  F +   P+    Y   L  NRDE++SRP+K  ++W   NEIL G D   G  GGTWL  S  G++A LTN+ + +L  QA+ RGEL   FL
Subjt:  MCIAAFLWQAHPL----YPFFLLLNRDEYHSRPTKPLEWW-ECNEILGGRD---GLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFL
Arabidopsis top hitse value%identityAlignment
AT1G20680.2 Protein of unknown function (DUF833)2.0e-0837.78Show/hide
Query:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGEL-PVRFLK
        M I AF W         LL+NRD + +R      W    +IL GR     GTW   ++ GRVAFL N   +    ++ S  EL PVRFL+
Subjt:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGEL-PVRFLK
AT1G20730.1 Protein of unknown function (DUF833)6.2e-0540.91Show/hide
Query:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEW-WECNEILGGRDGLAGGTWLACSRNGRVAFL
        M I AF W         LL NR+ + SR      W W+ +++L GR     GTWL  S  GRVAFL
Subjt:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEW-WECNEILGGRDGLAGGTWLACSRNGRVAFL
AT4G38260.1 Protein of unknown function (DUF833)9.1e-3365.17Show/hide
Query:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLK
        MCIA FLWQ+HPLYPF L LNRDE H+R T+ L WWE  E +GGRD + GGTWL C+R+GR+AFLTNF+E    P AKSRG+LP+R+L+
Subjt:  MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCATAGCAGCGTTTCTGTGGCAAGCTCATCCGCTATATCCATTCTTCCTTCTGCTCAATCGTGACGAATATCACAGTAGGCCCACGAAGCCGCTGGAATGGTGGGA
ATGTAACGAAATTTTGGGCGGGAGAGATGGTTTGGCCGGCGGGACGTGGCTGGCTTGCTCAAGAAATGGCAGAGTTGCATTTCTCACAAATTTCAGGGAAGTTGAATTAC
TTCCTCAGGCTAAAAGCAGAGGAGAGCTCCCCGTTCGTTTCTTGAAGGTAAAGTGA
mRNA sequenceShow/hide mRNA sequence
TGGCGATTGGAGCAATATTCTGTAAAATGAAGGATCAGCTCGCGTAGGGTCGTCGAATCTTCACTATCGGTTTGTCGGTTCGATTTCATCATGTGCATAGCAGCGTTTCT
GTGGCAAGCTCATCCGCTATATCCATTCTTCCTTCTGCTCAATCGTGACGAATATCACAGTAGGCCCACGAAGCCGCTGGAATGGTGGGAATGTAACGAAATTTTGGGCG
GGAGAGATGGTTTGGCCGGCGGGACGTGGCTGGCTTGCTCAAGAAATGGCAGAGTTGCATTTCTCACAAATTTCAGGGAAGTTGAATTACTTCCTCAGGCTAAAAGCAGA
GGAGAGCTCCCCGTTCGTTTCTTGAAGGTAAAGTGAATTTGGGTATGATTAGTTTCATAAAATTACTTTGAAAAATCATTGTTGTGCAGTGTTGTTACATCGAGATTAGT
AATCTAGAGGAACAAACTGGAACTTGAATTCGTTGAAACGCCTGATTAACCTGTTTTGGTTGATTAAGTCTGCTTGAGTTATATATAGGAATATTATGCGTATGGAGGTA
CTGCTTCATGCAGGACCTTGTGTGTAACCAAGAAGGAGCTGTTGGTTTTGTTTTACGGTGCTGTGTACTCGTGAATAACAAATACTGTGAGATCCACATCGGTTGGGGAG
GAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAAACGAGTTTTAGAAACCTTGAGGAGAAGCCCGAAAGGGAAAACCTAAAGAGGACAATATCTACT
AGTGGTGGGTTTGGGCTGTTACAAATGGTAT
Protein sequenceShow/hide protein sequence
MCIAAFLWQAHPLYPFFLLLNRDEYHSRPTKPLEWWECNEILGGRDGLAGGTWLACSRNGRVAFLTNFREVELLPQAKSRGELPVRFLKVK